1WCW
| Crystal Structure of Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (Wild type, Native, Form-1 crystal) | 分子名称: | GLYCEROL, Uroporphyrinogen III synthase | 著者 | Mizohata, E, Matsuura, T, Sakai, H, Murayama, K, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-05-06 | 公開日 | 2005-05-06 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Crystal Structure of Uroporphyrinogen III Synthase from Thermus thermophilus HB8 To be Published
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3WCK
| Crystal structure of monomeric photosensitizing fluorescent protein, Supernova | 分子名称: | Monomeric photosenitizing fluorescent protein supernova | 著者 | Sakai, N, Matsuda, T, Takemoto, K, Nagai, T. | 登録日 | 2013-05-27 | 公開日 | 2013-10-02 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | SuperNova, a monomeric photosensitizing fluorescent protein for chromophore-assisted light inactivation Sci Rep, 3, 2013
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3WIN
| Clostridium botulinum Hemagglutinin | 分子名称: | 17 kD hemagglutinin component, HA1, HA3 | 著者 | Amatsu, S, Sugawara, Y, Matsumura, T, Fujinaga, Y, Kitadokoro, K. | 登録日 | 2013-09-19 | 公開日 | 2013-11-06 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.5 Å) | 主引用文献 | Crystal Structure of Clostridium botulinum Whole Hemagglutinin Reveals a Huge Triskelion-shaped Molecular Complex J.Biol.Chem., 288, 2013
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1RTU
| USTILAGO SPHAEROGENA RIBONUCLEASE U2 | 分子名称: | RIBONUCLEASE U2, SULFATE ION | 著者 | Noguchi, S, Satow, Y, Uchida, T, Sasaki, C, Matsuzaki, T. | 登録日 | 1995-05-12 | 公開日 | 1996-11-08 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of Ustilago sphaerogena ribonuclease U2 at 1.8 A resolution. Biochemistry, 34, 1995
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7CP7
| Crystal structure of FqzB, native proteins | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase | 著者 | Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K. | 登録日 | 2020-08-06 | 公開日 | 2020-12-30 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis. Biochemistry, 59, 2020
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7CP6
| Crystal structure of FqzB | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase, ... | 著者 | Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K. | 登録日 | 2020-08-06 | 公開日 | 2020-12-30 | 最終更新日 | 2021-01-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis. Biochemistry, 59, 2020
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5XGZ
| Metagenomic glucose-tolerant glycosidase | 分子名称: | Beta-glycosidase, GLYCEROL, NICKEL (II) ION, ... | 著者 | Watanabe, M, Matsuzawa, T, Yaoi, K. | 登録日 | 2017-04-19 | 公開日 | 2018-05-02 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Improved thermostability of a metagenomic glucose-tolerant beta-glycosidase based on its X-ray crystal structure. Appl.Microbiol.Biotechnol., 101, 2017
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1UC9
| Crystal structure of a lysine biosynthesis enzyme, Lysx, from thermus thermophilus HB8 | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, lysine biosynthesis enzyme | 著者 | Sakai, H, Vassylyeva, M.N, Matsuura, T, Sekine, S, Nishiyama, M, Terada, T, Shirouzu, M, Kuramitsu, S, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-04-09 | 公開日 | 2003-09-23 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.38 Å) | 主引用文献 | Crystal Structure of a Lysine Biosynthesis Enzyme, LysX, from Thermus thermophilus HB8 J.Mol.Biol., 332, 2003
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6KYE
| The crystal structure of recombinant human adult hemoglobin | 分子名称: | CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... | 著者 | Kihira, K, Funaki, R, Okamoto, W, Endo, C, Morita, Y, Komatsu, T. | 登録日 | 2019-09-18 | 公開日 | 2020-01-01 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.28 Å) | 主引用文献 | Genetically engineered haemoglobin wrapped covalently with human serum albumins as an artificial O2carrier. J Mater Chem B, 8, 2020
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3WZU
| THE STRUCTURE OF MAP2K7 IN COMPLEX WITH 5Z-7-oxozeaenol | 分子名称: | (3S,5Z,8S,9S,11E)-8,9,16-trihydroxy-14-methoxy-3-methyl-3,4,9,10-tetrahydro-1H-2-benzoxacyclotetradecine-1,7(8H)-dione, Dual specificity mitogen-activated protein kinase kinase 7 | 著者 | Sogabe, Y, Hashimoto, Y, Matsumoto, T, Kinoshita, T. | 登録日 | 2014-10-07 | 公開日 | 2015-01-14 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.01 Å) | 主引用文献 | 5Z-7-Oxozeaenol covalently binds to MAP2K7 at Cys218 in an unprecedented manner. Bioorg.Med.Chem.Lett., 25, 2015
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5YQS
| Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | 著者 | Yaoi, K, Matsuzawa, T, Watanabe, M, Nakamichi, Y. | 登録日 | 2017-11-07 | 公開日 | 2018-11-14 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structure and substrate recognition mechanism of Aspergillus oryzae isoprimeverose-producing enzyme. J.Struct.Biol., 205, 2019
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3AUJ
| Structure of diol dehydratase complexed with glycerol | 分子名称: | CALCIUM ION, COBALAMIN, Diol dehydrase alpha subunit, ... | 著者 | Yamanishi, M, Kinoshita, K, Fukuoka, M, Shibata, T, Tobimatsu, T, Toraya, T. | 登録日 | 2011-02-07 | 公開日 | 2012-02-22 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Redesign of coenzyme B(12) dependent diol dehydratase to be resistant to the mechanism-based inactivation by glycerol and act on longer chain 1,2-diols Febs J., 279, 2012
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2ZWB
| Neutron crystal structure of wild type human lysozyme in D2O | 分子名称: | Lysozyme C | 著者 | Chiba-Kamoshida, K, Matsui, T, Chatake, T, Ohhara, T, Ostermann, A, Tanaka, I, Yutani, K, Niimura, N. | 登録日 | 2008-12-02 | 公開日 | 2009-12-08 | 最終更新日 | 2023-11-01 | 実験手法 | NEUTRON DIFFRACTION (1.8 Å) | 主引用文献 | Site-specific softening of peptide bonds by localized deuterium observed by neutron crystallography of human lysozyme To be Published
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1S2H
| The Mad2 spindle checkpoint protein possesses two distinct natively folded states | 分子名称: | Mitotic spindle assembly checkpoint protein MAD2A | 著者 | Luo, X, Tang, Z, Xia, G, Wassmann, K, Matsumoto, T, Rizo, J, Yu, H. | 登録日 | 2004-01-08 | 公開日 | 2004-03-30 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | The Mad2 spindle checkpoint protein has two distinct natively folded states. Nat.Struct.Mol.Biol., 11, 2004
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2ZDY
| Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4 | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | 著者 | Kawamoto, M, Shiromizu, I, Kukimoto-Niino, M, Tokmakov, A, Terada, T, Shirouzu, M, Matsusue, T, Yokoyama, S. | 登録日 | 2007-12-01 | 公開日 | 2008-12-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4. Acta Crystallogr.,Sect.D, 67, 2011
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3W5W
| Mn2+-GMP complex of nanoRNase (Nrn) from Bacteroides fragilis | 分子名称: | GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, Putative exopolyphosphatase-related protein | 著者 | Uemura, Y, Nakagawa, N, Wakamatsu, T, Montelione, G.T, Hunt, J.F, Masui, R, Kuramitsu, S. | 登録日 | 2013-02-07 | 公開日 | 2013-07-10 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | 主引用文献 | Crystal structure of the ligand-binding form of nanoRNase from Bacteroides fragilis, a member of the DHH/DHHA1 phosphoesterase family of proteins. Febs Lett., 587, 2013
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5GHK
| Crystal Structure Analysis of Canine serum albumin | 分子名称: | Serum albumin | 著者 | Kihira, K, Yamada, K, Kureishi, M, Yokomaku, K, Shinohara, R, Akiyama, M, Komatsu, T. | 登録日 | 2016-06-20 | 公開日 | 2016-11-23 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Artificial Blood for Dogs Sci Rep, 6, 2016
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2ZDX
| Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4 | 分子名称: | 4-[4-(4-methoxyphenyl)-5-methyl-1H-pyrazol-3-yl]benzene-1,3-diol, Pyruvate dehydrogenase kinase isozyme 4 | 著者 | Kawamoto, M, Shiromizu, I, Kukimoto-niino, M, Tokmakov, A, Terada, T, Shirouzu, M, Matsusue, T, Yokoyama, S. | 登録日 | 2007-11-30 | 公開日 | 2008-12-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.54 Å) | 主引用文献 | Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4. Acta Crystallogr.,Sect.D, 67, 2011
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3A8S
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3WU6
| Oxidized E.coli Lon Proteolytic domain | 分子名称: | Lon protease, SULFATE ION | 著者 | Nishii, W, Kukimoto-Niino, M, Terada, T, Shirouzu, M, Muramatsu, T, Yokoyama, S. | 登録日 | 2014-04-22 | 公開日 | 2014-11-12 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | A redox switch shapes the Lon protease exit pore to facultatively regulate proteolysis. Nat. Chem. Biol., 11, 2015
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3WT0
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7WDO
| Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ... | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.21 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDR
| Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | 4-nitrophenyl beta-D-glucopyranoside, Beta-glucosidase, SULFATE ION | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDS
| Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | Beta-glucosidase, SULFATE ION, beta-D-xylopyranose | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.68 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDP
| Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | Beta-glucosidase, SULFATE ION, alpha-D-glucopyranose, ... | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.39 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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