Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 93 results

7DIZ
DownloadVisualize
BU of 7diz by Molmil
Structure of PfGrx1 in the reduced state using DTT
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Glutaredoxin
Authors:Manickam, Y, Sharma, A.
Deposit date:2020-11-19
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Interaction of metals with PfGrx1
To Be Published
7DIL
DownloadVisualize
BU of 7dil by Molmil
Structure of PfGrx1 with cesium
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CESIUM ION, ...
Authors:Manickam, Y, Sharma, A.
Deposit date:2020-11-19
Release date:2021-11-24
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Interaction of metals with PfGrx1
To Be Published
7DIR
DownloadVisualize
BU of 7dir by Molmil
Structure of PfGrx1 with mercury
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Glutaredoxin, ...
Authors:Manickam, Y, Sharma, A.
Deposit date:2020-11-19
Release date:2021-11-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Interaction of metals with PfGrx1
To Be Published
7DIO
DownloadVisualize
BU of 7dio by Molmil
Structure of PfGrx1 with iron
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, FE (III) ION, ...
Authors:Manickam, Y, Sharma, A.
Deposit date:2020-11-19
Release date:2021-11-24
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Interaction of metals with PfGrx1
To Be Published
7DIM
DownloadVisualize
BU of 7dim by Molmil
Structure of PfGrx1 with cadmium
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CADMIUM ION, ...
Authors:Manickam, Y, Sharma, A.
Deposit date:2020-11-19
Release date:2021-11-24
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Interaction of metals with PfGrx1
To Be Published
7DIT
DownloadVisualize
BU of 7dit by Molmil
Structure of PfGrx1 in the intermediate state with cadmium and cesium
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CADMIUM ION, ...
Authors:Manickam, Y, Sharma, A.
Deposit date:2020-11-19
Release date:2021-11-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Interaction of metals with PfGrx1
To Be Published
7DIV
DownloadVisualize
BU of 7div by Molmil
Structure of PfGrx1 in the intermediate state with cadmium
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CADMIUM ION, ...
Authors:Manickam, Y, Sharma, A.
Deposit date:2020-11-19
Release date:2021-11-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Interaction of metals with PfGrx1
To Be Published
7DJ0
DownloadVisualize
BU of 7dj0 by Molmil
Structure of PfGrx1 in the reduced state using BME
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Glutaredoxin
Authors:Manickam, Y, Sharma, A.
Deposit date:2020-11-19
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Interaction of metals with PfGrx1
To Be Published
7DIW
DownloadVisualize
BU of 7diw by Molmil
Structure of PfGrx1 in the intermediate state with mercury
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Glutaredoxin, ...
Authors:Manickam, Y, Sharma, A.
Deposit date:2020-11-19
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.671 Å)
Cite:Interaction of metals with PfGrx1
To Be Published
6IPA
DownloadVisualize
BU of 6ipa by Molmil
C-terminal EMAP II-like domain of p43 refined against twinned data
Descriptor: aminoacyl-tRNA synthetase-interacting multifunctional protein p43
Authors:Manickam, Y, Harlos, K, Gupta, S, Sharma, A.
Deposit date:2018-11-02
Release date:2019-11-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal structures of the two domains that constitute the Plasmodium vivax p43 protein.
Acta Crystallogr D Struct Biol, 76, 2020
6JRE
DownloadVisualize
BU of 6jre by Molmil
Structure of N-terminal domain of Plasmodium vivax p43 (PfNTD) solved by Co-SAD phasing
Descriptor: Aminoacyl-tRNA synthetase-interacting multifunctional protein p43, COBALT (II) ION
Authors:Manickam, Y, Harlos, K, Sharma, M, Gupta, S, Sharma, A.
Deposit date:2019-04-03
Release date:2020-03-11
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structures of the two domains that constitute the Plasmodium vivax p43 protein.
Acta Crystallogr D Struct Biol, 76, 2020
3KNP
DownloadVisualize
BU of 3knp by Molmil
Crystal structure of DTD from Plasmodium falciparum
Descriptor: D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-12
Release date:2009-12-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KO7
DownloadVisualize
BU of 3ko7 by Molmil
DTD from Plasmodium falciparum in complex with D-Lysine
Descriptor: D-LYSINE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KO3
DownloadVisualize
BU of 3ko3 by Molmil
D-tyrosyl-tRNA(Tyr) deacylase from Plasmodium falciparum incomplex with ADP, obtained through soaking native enzyme crystal with the ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KOD
DownloadVisualize
BU of 3kod by Molmil
DTD from Plasmodium falciparum in complex with D-Serine
Descriptor: D-SERINE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KO5
DownloadVisualize
BU of 3ko5 by Molmil
D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3LMU
DownloadVisualize
BU of 3lmu by Molmil
Crystal structure of DTD from Plasmodium falciparum
Descriptor: D-tyrosyl-tRNA(Tyr) deacylase, IODIDE ION
Authors:Manickam, Y, Bhatt, T.K, Khan, S, Sharma, A.
Deposit date:2010-02-01
Release date:2010-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of D-tyrosyl-tRNATyr deacylase using home-source Cu Kalpha and moderate-quality iodide-SAD data: structural polymorphism and HEPES-bound enzyme states
Acta Crystallogr.,Sect.D, 66, 2010
3LMT
DownloadVisualize
BU of 3lmt by Molmil
Crystal structure of DTD from Plasmodium falciparum
Descriptor: D-tyrosyl-tRNA(Tyr) deacylase, IODIDE ION
Authors:Manickam, Y, Bhatt, T.K, Khan, S, Sharma, A.
Deposit date:2010-02-01
Release date:2010-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure of D-tyrosyl-tRNATyr deacylase using home-source Cu Kalpha and moderate-quality iodide-SAD data: structural polymorphism and HEPES-bound enzyme states
Acta Crystallogr.,Sect.D, 66, 2010
3LMV
DownloadVisualize
BU of 3lmv by Molmil
D-Tyr-tRNA(Tyr) Deacylase from plasmodium falciparum in complex with hepes
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-tyrosyl-tRNA(Tyr) deacylase, SULFITE ION
Authors:Manickam, Y, Khan, S, Bhatt, T.K, Sharma, A.
Deposit date:2010-02-01
Release date:2010-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.833 Å)
Cite:Structure of D-tyrosyl-tRNATyr deacylase using home-source Cu Kalpha and moderate-quality iodide-SAD data: structural polymorphism and HEPES-bound enzyme states
Acta Crystallogr.,Sect.D, 66, 2010
3KO9
DownloadVisualize
BU of 3ko9 by Molmil
DTD from Plasmodium falciparum in complex with D-Arginine
Descriptor: D-ARGININE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KNF
DownloadVisualize
BU of 3knf by Molmil
Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum
Descriptor: D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-12
Release date:2009-12-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KOB
DownloadVisualize
BU of 3kob by Molmil
DTD from Plasmodium falciparum in complex with D-Glutamic acid
Descriptor: D-GLUTAMIC ACID, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KO4
DownloadVisualize
BU of 3ko4 by Molmil
Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KOC
DownloadVisualize
BU of 3koc by Molmil
DTD from Plasmodium falciparum in complex with D-Histidine
Descriptor: D-HISTIDINE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
7F9A
DownloadVisualize
BU of 7f9a by Molmil
Homo sapiens Prolyl-tRNA Synthetase (HsPRS) in Complex with L-proline and compound L97
Descriptor: 4-[(3S)-3-cyclopropyl-3-(hydroxymethyl)-2-oxidanylidene-pyrrolidin-1-yl]-N-[[3-fluoranyl-5-(1-methylpyrazol-4-yl)phenyl]methyl]-6-methyl-pyridine-2-carboxamide, Bifunctional glutamate/proline--tRNA ligase, CALCIUM ION, ...
Authors:Manickam, Y, Malhotra, N, Sharma, A.
Deposit date:2021-07-04
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Targeting prolyl-tRNA synthetase via a series of ATP-mimetics to accelerate drug discovery against toxoplasmosis.
Plos Pathog., 19, 2023

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon