Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1216 件

7FDS
DownloadVisualize
BU of 7fds by Molmil
High resolution crystal structure of LpqH from Mycobacterium tuberculosis
分子名称: Lipoprotein LpqH
著者Kundapura, S.V, Chatterjee, S, Samanta, D, Ramagopal, U.A.
登録日2021-07-17
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.258 Å)
主引用文献High-resolution crystal structure of LpqH, an immunomodulatory surface lipoprotein of Mycobacterium tuberculosis reveals a distinct fold and a conserved cleft on its surface.
Int.J.Biol.Macromol., 210, 2022
2YKN
DownloadVisualize
BU of 2ykn by Molmil
Crystal structure of HIV-1 Reverse Transcriptase (RT) in complex with a Difluoromethylbenzoxazole (DFMB) Pyrimidine Thioether derivative, a non-nucleoside RT inhibitor (NNRTI)
分子名称: 2-[DIFLUORO-[(4-METHYL-PYRIMIDINYL)-THIO]METHYL]-BENZOXAZOLE, CALCIUM ION, REVERSE TRANSCRIPTASE/RIBONUCLEASE H
著者Boyer, J, Arnoult, E, Medebielle, M, Guillemont, J, Unge, T, Unge, J, Jochmans, D.
登録日2011-05-28
公開日2011-08-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Difluoromethylbenzoxazole Pyrimidine Thioether Derivatives: A Novel Class of Potent Non-Nucleoside HIV-1 Reverse Transcriptase Inhibitors.
J.Med.Chem., 54, 2011
1Z93
DownloadVisualize
BU of 1z93 by Molmil
Human Carbonic Anhydrase III:Structural and Kinetic study of Catalysis and Proton Transfer.
分子名称: Carbonic anhydrase III, ZINC ION
著者Duda, D.M, Tu, C, Fisher, S.Z, An, H, Yoshioka, C, Govindasamy, L, Laipis, P.J, Agbandje-McKenna, M, Silverman, D.N, McKenna, R.
登録日2005-03-31
公開日2005-08-09
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Human Carbonic Anhydrase III: Structural and Kinetic Study of Catalysis and Proton Transfer
Biochemistry, 44, 2005
1ZLJ
DownloadVisualize
BU of 1zlj by Molmil
Crystal Structure of the Mycobacterium tuberculosis Hypoxic Response Regulator DosR C-terminal Domain
分子名称: Dormancy Survival Regulator
著者Wisedchaisri, G, Wu, M, Rice, A.E, Roberts, D.M, Sherman, D.R, Hol, W.G.J.
登録日2005-05-06
公開日2006-01-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of Mycobacterium tuberculosis DosR and DosR-DNA complex involved in gene activation during adaptation to hypoxic latency.
J.Mol.Biol., 354, 2005
2O0I
DownloadVisualize
BU of 2o0i by Molmil
crystal structure of the R185A mutant of the N-terminal domain of the Group B Streptococcus Alpha C protein
分子名称: C protein alpha-antigen
著者Hogle, J.M, Filman, D.J, Baron, M.J, Madoff, L.C, Iglesias, A.
登録日2006-11-27
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Identification of a glycosaminoglycan binding region of the alpha C protein that mediates entry of group B streptococci into host cells.
J.Biol.Chem., 282, 2007
2CNW
DownloadVisualize
BU of 2cnw by Molmil
GDPALF4 complex of the SRP GTPases Ffh and FtsY
分子名称: CELL DIVISION PROTEIN FTSY, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, ...
著者Focia, P.J, Gawronski-Salerno, J, Coon V, J.S, Freymann, D.M.
登録日2006-05-24
公開日2006-10-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structure of a Gdp:Alf(4) Complex of the Srp Gtpases Ffh and Ftsy, and Identification of a Peripheral Nucleotide Interaction Site.
J.Mol.Biol., 360, 2006
6TSQ
DownloadVisualize
BU of 6tsq by Molmil
Marasmius oreades agglutinin (MOA) activated by manganese (II)
分子名称: 1,2-ETHANEDIOL, Agglutinin, CALCIUM ION, ...
著者Cordara, G, Manna, D, Krengel, U.
登録日2019-12-21
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of MOA in complex with a peptide fragment: A protease caught in flagranti .
Curr Res Struct Biol, 2, 2020
1PIV
DownloadVisualize
BU of 1piv by Molmil
BINDING OF THE ANTIVIRAL DRUG WIN51711 TO THE SABIN STRAIN OF TYPE 3 POLIOVIRUS: STRUCTURAL COMPARISON WITH DRUG BINDING IN RHINOVIRUS 14
分子名称: 5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE, MYRISTIC ACID, POLIOVIRUS TYPE 3 (SUBUNIT VP1), ...
著者Hiremath, C.N, Grant, R.A, Filman, D.J, Hogle, J.M.
登録日1995-02-02
公開日1995-06-03
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Binding of the antiviral drug WIN51711 to the sabin strain of type 3 poliovirus: structural comparison with drug binding in rhinovirus 14.
Acta Crystallogr.,Sect.D, 51, 1995
1PVC
DownloadVisualize
BU of 1pvc by Molmil
REFINEMENT OF THE SABIN STRAIN OF TYPE 3 POLIOVIRUS AT 2.4 ANGSTROMS AND THE CRYSTAL STRUCTURES OF ITS VARIANTS AT 2.9 ANGSTROMS RESOLUTION
分子名称: MYRISTIC ACID, POLIOVIRUS TYPE 3, SABIN STRAIN, ...
著者Syed, R, Filman, D.J, Hogle, J.M.
登録日1995-03-30
公開日1995-09-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Refinement of the Sabin Strain of Type 3 Poliovirus at 2.4 Angstroms and the Crystal Structures of its Variants at 2.9 Angstroms Resolution
To be Published
6TSL
DownloadVisualize
BU of 6tsl by Molmil
Marasmius oreades agglutinin (MOA) in complex with the truncated PVPRAHS synthetic substrate
分子名称: 1,2-ETHANEDIOL, Agglutinin, CALCIUM ION, ...
著者Cordara, G, Manna, D, Krengel, U.
登録日2019-12-20
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of MOA in complex with a peptide fragment: A protease caught in flagranti .
Curr Res Struct Biol, 2, 2020
1AS3
DownloadVisualize
BU of 1as3 by Molmil
GDP BOUND G42V GIA1
分子名称: GIA1, GUANOSINE-5'-DIPHOSPHATE, SULFATE ION
著者Raw, A.S, Coleman, D.E, Gilman, A.G, Sprang, S.R.
登録日1997-08-11
公開日1997-11-12
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and biochemical characterization of the GTPgammaS-, GDP.Pi-, and GDP-bound forms of a GTPase-deficient Gly42 --> Val mutant of Gialpha1.
Biochemistry, 36, 1997
1YTR
DownloadVisualize
BU of 1ytr by Molmil
NMR structure of plantaricin a in dpc micelles, 20 structures
分子名称: Bacteriocin plantaricin A
著者Kristiansen, P.E, Fimland, G, Mantzilas, D, Nissen-Meyer, J.
登録日2005-02-11
公開日2005-05-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure and mode of action of the membrane-permeabilizing antimicrobial peptide pheromone plantaricin A
J.Biol.Chem., 280, 2005
1AS0
DownloadVisualize
BU of 1as0 by Molmil
GTP-GAMMA-S BOUND G42V GIA1
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GIA1, MAGNESIUM ION, ...
著者Raw, A.S, Coleman, D.E, Gilman, A.G, Sprang, S.R.
登録日1997-08-11
公開日1997-11-12
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and biochemical characterization of the GTPgammaS-, GDP.Pi-, and GDP-bound forms of a GTPase-deficient Gly42 --> Val mutant of Gialpha1.
Biochemistry, 36, 1997
6TSM
DownloadVisualize
BU of 6tsm by Molmil
Marasmius oreades agglutinin (MOA) in complex with the truncated PVVRAHS synthetic substrate
分子名称: 1,2-ETHANEDIOL, Agglutinin, CALCIUM ION, ...
著者Cordara, G, Manna, D, Krengel, U.
登録日2019-12-20
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of MOA in complex with a peptide fragment: A protease caught in flagranti .
Curr Res Struct Biol, 2, 2020
1AS2
DownloadVisualize
BU of 1as2 by Molmil
GDP+PI BOUND G42V GIA1
分子名称: GIA1, GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION
著者Raw, A.S, Coleman, D.E, Gilman, A.G, Sprang, S.R.
登録日1997-08-11
公開日1997-11-12
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and biochemical characterization of the GTPgammaS-, GDP.Pi-, and GDP-bound forms of a GTPase-deficient Gly42 --> Val mutant of Gialpha1.
Biochemistry, 36, 1997
5LRX
DownloadVisualize
BU of 5lrx by Molmil
Structure of A20 OTU domain bound to ubiquitin
分子名称: Polyubiquitin-B, Tumor necrosis factor alpha-induced protein 3
著者Mevissen, T.E.T, Kulathu, Y, Mulder, M.P.C, Geurink, P.P, Maslen, S.L, Gersch, M, Elliott, P.R, Burke, J.E, van Tol, B.D.M, Akutsu, M, El Oualid, F, Kawasaki, M, Freund, S.M.V, Ovaa, H, Komander, D.
登録日2016-08-22
公開日2016-10-19
最終更新日2017-09-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Molecular basis of Lys11-polyubiquitin specificity in the deubiquitinase Cezanne.
Nature, 538, 2016
6TSR
DownloadVisualize
BU of 6tsr by Molmil
Marasmius oreades agglutinin (MOA) activated by manganese (II) and calcium
分子名称: 1,2-ETHANEDIOL, Agglutinin, CALCIUM ION, ...
著者Cordara, G, Manna, D, Krengel, U.
登録日2019-12-21
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of MOA in complex with a peptide fragment: A protease caught in flagranti .
Curr Res Struct Biol, 2, 2020
6TSO
DownloadVisualize
BU of 6tso by Molmil
Marasmius oreades agglutinin (MOA) inhibited by cadmium
分子名称: 1,2-ETHANEDIOL, Agglutinin, CADMIUM ION, ...
著者Cordara, G, Manna, D, Krengel, U.
登録日2019-12-20
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of MOA in complex with a peptide fragment: A protease caught in flagranti .
Curr Res Struct Biol, 2, 2020
8DI5
DownloadVisualize
BU of 8di5 by Molmil
Cryo-EM structure of SARS-CoV-2 Beta (B.1.351) spike protein in complex with VH domain F6 (focused refinement of RBD and VH F6)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, VH F6
著者Zhu, X, Saville, J.W, Mannar, D, Berezuk, A.M, Subramaniam, S.
登録日2022-06-28
公開日2022-08-24
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Potent and broad neutralization of SARS-CoV-2 variants of concern (VOCs) including omicron sub-lineages BA.1 and BA.2 by biparatopic human VH domains.
Iscience, 25, 2022
2ADP
DownloadVisualize
BU of 2adp by Molmil
Nitrated Human Manganese Superoxide Dismutase
分子名称: MANGANESE (II) ION, POTASSIUM ION, Superoxide dismutase [Mn]
著者Quint, P, Reutzel, R, Mikulski, R, McKenna, R, Silverman, D.N.
登録日2005-07-20
公開日2006-07-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of nitrated human manganese superoxide dismutase: mechanism of inactivation.
FREE RADIC.BIOL.MED., 40, 2006
1M3A
DownloadVisualize
BU of 1m3a by Molmil
Solution structure of a circular form of the truncated N-terminal SH3 domain from oncogene protein c-Crk.
分子名称: Proto-oncogene C-crk
著者Schumann, F.H, Varadan, R, Tayakuniyil, P.P, Hall, J.B, Camarero, J.A, Fushman, D.
登録日2002-06-27
公開日2003-08-05
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Changing protein backbone topology: Structural and dynamic consequences of the backbone cyclization in SH3 domain
To be Published
2ADQ
DownloadVisualize
BU of 2adq by Molmil
Human Manganese Superoxide Dismutase
分子名称: MANGANESE (II) ION, POTASSIUM ION, Superoxide dismutase [Mn]
著者Quint, P, Reutzel, R, Mikulski, R, McKenna, R, Silverman, D.N.
登録日2005-07-20
公開日2006-07-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of nitrated human manganese superoxide dismutase: mechanism of inactivation.
FREE RADIC.BIOL.MED., 40, 2006
1CQU
DownloadVisualize
BU of 1cqu by Molmil
SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN L9
分子名称: 50S RIBOSOMAL PROTEIN L9
著者Hua, Y, Kuhlman, B, Hoffman, D, Raleigh, D.P.
登録日1999-08-11
公開日2002-04-27
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Effects of varying the local propensity to form secondary structure on the stability and folding kinetics of a rapid folding mixed alpha/beta protein: characterization of a truncation mutant of the N-terminal domain of the ribosomal protein L9.
J.Mol.Biol., 289, 1999
5MU9
DownloadVisualize
BU of 5mu9 by Molmil
MOA-E-64 complex
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Agglutinin, ...
著者Cordara, G, Manna, D, Krengel, U.
登録日2017-01-12
公開日2017-07-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Family of Papain-Like Fungal Chimerolectins with Distinct Ca(2+)-Dependent Activation Mechanism.
Biochemistry, 56, 2017
6RV3
DownloadVisualize
BU of 6rv3 by Molmil
Crystal structure of the human two pore domain potassium ion channel TASK-1 (K2P3.1) in a closed conformation with a bound inhibitor BAY 1000493
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, DECYL-BETA-D-MALTOPYRANOSIDE, ...
著者Rodstrom, K.E.J, Pike, A.C.W, Zhang, W, Quigley, A, Speedman, D, Mukhopadhyay, S.M.M, Shrestha, L, Chalk, R, Venkaya, S, Bushell, S.R, Tessitore, A, Burgess-Brown, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
登録日2019-05-30
公開日2019-08-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A lower X-gate in TASK channels traps inhibitors within the vestibule.
Nature, 582, 2020

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon