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PDB: 21 results

6HE5
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BU of 6he5 by Molmil
20S core particle of PAN-proteasomes
Descriptor: Proteasome subunit alpha, Proteasome subunit beta, Proteasome-activating nucleotidase
Authors:Majumder, P, Rudack, T, Beck, F, Baumeister, W.
Deposit date:2018-08-20
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HEC
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BU of 6hec by Molmil
PAN-proteasome in state 4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Majumder, P, Rudack, T, Beck, F, Baumeister, W.
Deposit date:2018-08-20
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6.95 Å)
Cite:Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HE8
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BU of 6he8 by Molmil
PAN-proteasome in state 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Majumder, P, Rudack, T, Beck, F, Baumeister, W.
Deposit date:2018-08-20
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6.86 Å)
Cite:Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HED
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BU of 6hed by Molmil
PAN-proteasome in state 5
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Majumder, P, Rudack, T, Beck, F, Baumeister, W.
Deposit date:2018-08-20
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6.95 Å)
Cite:Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HE4
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BU of 6he4 by Molmil
AAA-ATPase ring of PAN-proteasomes
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Majumder, P, Rudack, T, Beck, F, Baumeister, W.
Deposit date:2018-08-20
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.85 Å)
Cite:Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HE9
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BU of 6he9 by Molmil
PAN-proteasome in state 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Majumder, P, Rudack, T, Beck, F, Baumeister, W.
Deposit date:2018-08-20
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6.35 Å)
Cite:Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HEA
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BU of 6hea by Molmil
PAN-proteasome in state 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Majumder, P, Rudack, T, Beck, F, Baumeister, W.
Deposit date:2018-08-20
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7.04 Å)
Cite:Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HE7
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BU of 6he7 by Molmil
20S proteasome from Archaeoglobus fulgidus
Descriptor: Proteasome subunit alpha, Proteasome subunit beta
Authors:Majumder, P, Rudack, T, Beck, F, Baumeister, W.
Deposit date:2018-08-20
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
9C67
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BU of 9c67 by Molmil
cryoEM structure of CRISPR associated effector, CARF-Adenosine deaminase 1, Cad1, in apo form
Descriptor: Adenosine deaminase domain-containing protein, MAGNESIUM ION
Authors:Majumder, P, Patel, D.J.
Deposit date:2024-06-07
Release date:2024-10-30
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The CRISPR-associated adenosine deaminase Cad1 converts ATP to ITP to provide antiviral immunity.
Cell, 2024
9C69
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BU of 9c69 by Molmil
The CRISPR associated CARF-adenosine deaminase, Cad1-CARF in the cA4 bound form
Descriptor: AAAA, Adenosine deaminase domain-containing protein
Authors:Majumder, P, Patel, D.J.
Deposit date:2024-06-07
Release date:2024-10-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The CRISPR-associated adenosine deaminase Cad1 converts ATP to ITP to provide antiviral immunity.
Cell, 2024
9C6C
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BU of 9c6c by Molmil
cryoEM structure of CRISPR associated effector, CARF-Adenosine deaminase 1, Cad1, in apo form with ATP (symmetric sites).
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenosine deaminase domain-containing protein, MAGNESIUM ION
Authors:Majumder, P, Patel, D.J.
Deposit date:2024-06-07
Release date:2024-10-30
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The CRISPR-associated adenosine deaminase Cad1 converts ATP to ITP to provide antiviral immunity.
Cell, 2024
9CDB
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BU of 9cdb by Molmil
CryoEM structure of CRISPR associated effector, CARF-Adenosine deaminase 1, Cad1, in cA6 (partial density) bound form with ATP (partial density).
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenosine deaminase domain-containing protein, MAGNESIUM ION, ...
Authors:Majumder, P, Patel, D.J.
Deposit date:2024-06-24
Release date:2024-10-30
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The CRISPR-associated adenosine deaminase Cad1 converts ATP to ITP to provide antiviral immunity.
Cell, 2024
9C68
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BU of 9c68 by Molmil
The CRISPR associated CARF-adenosine deaminase Cad1-CARF in the cA6 bound form
Descriptor: Adenosine deaminase domain-containing protein, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3')
Authors:Majumder, P, Patel, D.J.
Deposit date:2024-06-07
Release date:2024-10-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:The CRISPR-associated adenosine deaminase Cad1 converts ATP to ITP to provide antiviral immunity.
Cell, 2024
9C6A
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BU of 9c6a by Molmil
The CRISPR associated adenosine deaminase Cad1-CARF in the apo form
Descriptor: Adenosine deaminase domain-containing protein
Authors:Majumder, P, Patel, D.J.
Deposit date:2024-06-07
Release date:2024-10-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The CRISPR-associated adenosine deaminase Cad1 converts ATP to ITP to provide antiviral immunity.
Cell, 2024
9C77
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BU of 9c77 by Molmil
cryoEM structure of CRISPR associated effector, CARF-Adenosine deaminase 1, Cad1, in cA4 bound form with ATP.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenosine deaminase domain-containing protein, MAGNESIUM ION, ...
Authors:Majumder, P, Patel, D.J.
Deposit date:2024-06-10
Release date:2024-10-30
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The CRISPR-associated adenosine deaminase Cad1 converts ATP to ITP to provide antiviral immunity.
Cell, 2024
9C6F
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BU of 9c6f by Molmil
cryoEM structure of CRISPR associated effector, CARF-Adenosine deaminase 1, Cad1, in apo form with ATP (Asymmetric sites).
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenosine deaminase domain-containing protein, MAGNESIUM ION
Authors:Majumder, P, Patel, D.J.
Deposit date:2024-06-07
Release date:2024-10-30
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The CRISPR-associated adenosine deaminase Cad1 converts ATP to ITP to provide antiviral immunity.
Cell, 2024
7Y58
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BU of 7y58 by Molmil
CryoEM structure of QacA (D411N), an antibacterial efflux transporter from Staphylococcus aureus
Descriptor: Antiseptic resistance protein, Single-domain Indian camelid antibody (A4), single-domain indian camelid antibody(B7)
Authors:Penmatsa, A, Majumder, P.
Deposit date:2022-06-16
Release date:2023-07-12
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of antibacterial efflux transporter QacA from Staphylococcus aureus reveals a novel extracellular loop with allosteric role.
Embo J., 42, 2023
6L9B
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BU of 6l9b by Molmil
X-ray structure of synthetic GB1 domain with mutations K10(DVA), T11A
Descriptor: Immunoglobulin G-binding protein G
Authors:Penmatsa, A, Chatterjee, J, Khatri, B, Majumder, P.
Deposit date:2019-11-08
Release date:2020-08-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Increasing protein stability by engineering the n -> pi * interaction at the beta-turn.
Chem Sci, 11, 2020
6L91
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BU of 6l91 by Molmil
X-ray structure of synthetic GB1 domain with the mutation K10(DVA).
Descriptor: GLYCEROL, Immunoglobulin G-binding protein G
Authors:Penmatsa, A, Chatterjee, J, Khatri, B, Majumder, P.
Deposit date:2019-11-07
Release date:2020-08-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:Increasing protein stability by engineering the n -> pi * interaction at the beta-turn.
Chem Sci, 11, 2020
6L9D
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BU of 6l9d by Molmil
X-ray structure of synthetic GB1 domain with mutations K10(DVA), T11S
Descriptor: Immunoglobulin G-binding protein G
Authors:Penmatsa, A, Chatterjee, J, Majumder, P, Khatri, B.
Deposit date:2019-11-08
Release date:2020-08-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Increasing protein stability by engineering the n -> pi * interaction at the beta-turn.
Chem Sci, 11, 2020
6LJI
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BU of 6lji by Molmil
X-ray structure of synthetic GB1 domain with mutations K10(DVA), T11V
Descriptor: Immunoglobulin G-binding protein G
Authors:Penmatsa, A, Chatterjee, J, Majumder, P, Khatri, B.
Deposit date:2019-12-16
Release date:2020-08-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.843 Å)
Cite:Increasing protein stability by engineering the n -> pi * interaction at the beta-turn.
Chem Sci, 11, 2020

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