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PDB: 51689 件

8CQV
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Flavin mononucleotide-dependent nitroreductase B.thetaiotaomicron (BT_3392)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, ...
著者Blaha, J, Adam, L, Beckham, K.S.H, Chojnowski, G, Wilmanns, M, Zimmermann, M.
登録日2023-03-07
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insights into the diversity of nitroreductase enzymes in Bacteroides thetaiotaomicron
To Be Published
6F9N
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CRYSTAL STRUCTURE OF THE HUMAN CPSF160-WDR33 COMPLEX
分子名称: Cleavage and polyadenylation specificity factor subunit 1, pre-mRNA 3' end processing protein WDR33
著者Clerici, M, Jinek, M.
登録日2017-12-14
公開日2018-01-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into the assembly and polyA signal recognition mechanism of the human CPSF complex.
Elife, 6, 2017
7QCX
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Two-state liquid NMR Structure of a PDZ2 Domain from hPTP1E, apo form
分子名称: Tyrosine-protein phosphatase non-receptor type 13
著者Ashkinadze, D, Kadavath, H, Chi, C, Friedmann, M, Strotz, D, Kumari, P, Minges, M, Cadalbert, R, Koenigl, S, Guentert, P, Voegeli, B, Riek, R.
登録日2021-11-25
公開日2022-09-07
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Atomic resolution protein allostery from the multi-state structure of a PDZ domain.
Nat Commun, 13, 2022
7QCY
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Two-state liquid NMR Structure of a PDZ2 Domain from hPTP1E, complexed with RA-GEF2 peptide
分子名称: Tyrosine-protein phosphatase non-receptor type 13
著者Ashkinadze, D, Kadavath, H, Chi, C, Friedmann, M, Strotz, D, Kumari, P, Minges, M, Cadalbert, R, Koenigl, S, Guentert, P, Voegeli, B, Riek, R.
登録日2021-11-25
公開日2022-09-07
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Atomic resolution protein allostery from the multi-state structure of a PDZ domain.
Nat Commun, 13, 2022
7ZMM
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Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G2-001
分子名称: ATP-dependent DNA helicase Q5, Gluebody G2-001, ZINC ION
著者Ye, M, Makola, M, Newman, J.A, Fairhead, M, MacLean, E, Krojer, T, Aitkenhead, H, Bountra, C, Gileadi, O, von Delft, F.
登録日2022-04-19
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Gluebodies improve crystal reliability and diversity through transferable nanobody mutations that introduce constitutive crystal contacts
To Be Published
1K5O
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CPI-17(35-120) deletion mutant
分子名称: CPI-17
著者Ohki, S, Eto, M, Kariya, E, Hayano, T, Hayashi, Y, Yazawa, M, Brautigan, D, Kainosho, M.
登録日2001-10-11
公開日2002-10-11
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of the Myosin Phosphatase Inhibitor Protein CPI-17 Shows Phosphorylation-induced Conformational Changes Responsible for Activation
J.Mol.Biol., 314, 2001
7ZMN
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Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G3-048
分子名称: ATP-dependent DNA helicase Q5, Gluebody G3-048, SULFATE ION, ...
著者Ye, M, Makola, M, Newman, J.A, Fairhead, M, MacLean, E, Krojer, T, Aitkenhead, H, Bountra, C, Gileadi, O, von Delft, F.
登録日2022-04-19
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Gluebodies improve crystal reliability and diversity through transferable nanobody mutations that introduce constitutive crystal contacts
To Be Published
8CQT
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BU of 8cqt by Molmil
Flavin mononucleotide-dependent nitroreductase B.thetaiotaomicron (BT_1316)
分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, Putative NADH dehydrogenase/NAD(P)H nitroreductase
著者Blaha, J, Adam, L, Beckham, K.S.H, Chojnowski, G, Wilmanns, M, Zimmermann, M.
登録日2023-03-07
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insights into the diversity of nitroreductase enzymes in Bacteroides thetaiotaomicron
To Be Published
6FCJ
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Estimation of Protein-Ligand Unbinding Kinetics Using Non-Equilibrium Targeted Molecular Dynamics Simulations
分子名称: 4-[2-(2-chlorophenyl)pyrazol-3-yl]benzene-1,3-diol, Heat shock protein HSP 90-alpha
著者Musil, D, Lehmann, M, Eggenweiler, H.-M.
登録日2017-12-20
公開日2019-01-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Estimation of Protein-Ligand Unbinding Kinetics Using Non-Equilibrium Targeted Molecular Dynamics Simulations
Arxiv, 2019
1K85
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Solution structure of the fibronectin type III domain from Bacillus circulans WL-12 Chitinase A1.
分子名称: CHITINASE A1
著者Jee, J.G, Ikegami, T, Hashimoto, M, Kawabata, T, Ikeguchi, M, Watanabe, T, Shirakawa, M.
登録日2001-10-23
公開日2002-12-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the Fibronectin Type III Domain from Bacillus circulans WL-12 Chitinase A1
J.Biol.Chem., 277, 2002
1BTK
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PH DOMAIN AND BTK MOTIF FROM BRUTON'S TYROSINE KINASE MUTANT R28C
分子名称: BRUTON'S TYROSINE KINASE, SODIUM ION, ZINC ION
著者Hyvonen, M, Saraste, M.
登録日1997-07-01
公開日1997-09-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the PH domain and Btk motif from Bruton's tyrosine kinase: molecular explanations for X-linked agammaglobulinaemia.
EMBO J., 16, 1997
8CQS
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Flavin mononucleotide-dependent nitroreductase B.thetaiotaomicron (BT_0217)
分子名称: FLAVIN MONONUCLEOTIDE, Nitroreductase-like protein, PHOSPHATE ION
著者Blaha, J, Gratzl, S, Mortensen, S.A, Beckham, K.S.H, Chojnowski, G, Wilmanns, M, Zimmermann, M.
登録日2023-03-07
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insights into the diversity of nitroreductase enzymes in Bacteroides thetaiotaomicron
To Be Published
5EYL
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TUBULIN-BINDING DARPIN
分子名称: DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN), GLYCEROL, PHOSPHATE ION
著者Ahmad, S, Kossow, M, Gigant, B.
登録日2015-11-25
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Destabilizing an interacting motif strengthens the association of a designed ankyrin repeat protein with tubulin.
Sci Rep, 6, 2016
7QSF
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Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-12 (G206C, R207T, D210A, S211A)
分子名称: CHLORIDE ION, Isoaspartyl peptidase, Isoaspartyl peptidase subunit beta, ...
著者Loch, J.I, Kadziolka, K, Jaskolski, M.
登録日2022-01-13
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase.
Acta Crystallogr D Struct Biol, 78, 2022
7QTC
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Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-3 (G206H, R207T, D210P, S211Q)
分子名称: Isoaspartyl peptidase, Isoaspartyl peptidase subunit beta, SODIUM ION
著者Loch, J.I, Kadziolka, K, Jaskolski, M.
登録日2022-01-14
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase.
Acta Crystallogr D Struct Biol, 78, 2022
7QVR
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BU of 7qvr by Molmil
Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-37 (G206S, R207T, D210S)
分子名称: Beta-aspartyl-peptidase, CHLORIDE ION, Isoaspartyl peptidase, ...
著者Loch, J.I, Kadziolka, K, Jaskolski, M.
登録日2022-01-23
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase.
Acta Crystallogr D Struct Biol, 78, 2022
1C0F
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BU of 1c0f by Molmil
CRYSTAL STRUCTURE OF DICTYOSTELIUM CAATP-ACTIN IN COMPLEX WITH GELSOLIN SEGMENT 1
分子名称: ACTIN, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Matsuura, Y, Stewart, M, Kawamoto, M, Kamiya, N, Saeki, K, Yasunaga, T, Wakabayashi, T.
登録日1999-07-16
公開日2000-03-01
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the higher Ca(2+)-activation of the regulated actin-activated myosin ATPase observed with Dictyostelium/Tetrahymena actin chimeras
J.Mol.Biol., 296, 2000
7QY6
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Structure of E.coli Class 2 L-asparaginase EcAIII, wild type (WT EcAIII)
分子名称: Beta-aspartyl-peptidase, CHLORIDE ION, Isoaspartyl peptidase, ...
著者Loch, J.I, Klonecka, A, Kadziolka, K, Bonarek, P, Barciszewski, J, Imiolczyk, B, Brzezinski, K, Jaskolski, M.
登録日2022-01-27
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase.
Acta Crystallogr D Struct Biol, 78, 2022
7LNK
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Gorilla Bocavirus 1 Capsid
分子名称: Capsid protein
著者Yu, J.C, Mietzsch, M, Agbandje-McKenna, M.
登録日2021-02-07
公開日2021-03-17
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Characterization of the GBoV1 Capsid and Its Antibody Interactions.
Viruses, 13, 2021
6ETO
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BU of 6eto by Molmil
Atomic resolution structure of RNase A (data collection 5)
分子名称: ISOPROPYL ALCOHOL, Ribonuclease pancreatic
著者Caterino, M, Vergara, A, Merlino, A.
登録日2017-10-27
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献The Alkylquinolone Repertoire of Pseudomonas aeruginosa is Linked to Structural Flexibility of the FabH-like 2-Heptyl-3-hydroxy-4(1H)-quinolone (PQS) Biosynthesis Enzyme PqsBC.
Chembiochem, 2018
6FFT
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Neutron structure of human transthyretin (TTR) S52P mutant in complex with tafamidis at room temperature to 2A resolution (quasi-Laue)
分子名称: 2-(3,5-dichlorophenyl)-1,3-benzoxazole-6-carboxylic acid, Transthyretin
著者Yee, A.W, Moulin, M, Blakeley, M.P, Haertlein, M, Mitchell, E.P, Forsyth, V.T.
登録日2018-01-09
公開日2019-01-02
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION
主引用文献A molecular mechanism for transthyretin amyloidogenesis.
Nat Commun, 10, 2019
8CFZ
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Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment H09
分子名称: 1-[2,4-bis(fluoranyl)phenyl]-2-(3,4-dihydro-1,2,4-triazol-2-yl)ethanone, ADENINE, Adenosylhomocysteinase, ...
著者Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
登録日2023-02-03
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry H09
To be published
6EY7
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Human cytomegalovirus terminase nuclease domain, Mn soaked, inhibitor bound
分子名称: 4-[(4-fluorophenyl)methyl-methyl-amino]-2,4-bis(oxidanylidene)butanoic acid, CHLORIDE ION, MANGANESE (II) ION, ...
著者Bongarzone, S, Nadal, M, Kaczmarska, Z, Machon, C, Alvarez, M, Albericio, F, Coll, M.
登録日2017-11-10
公開日2018-10-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure-Driven Discovery of alpha , gamma-Diketoacid Inhibitors Against UL89 Herpesvirus Terminase.
Acs Omega, 3, 2018
5FX6
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Novel inhibitors of human rhinovirus 3C protease
分子名称: RHINOVIRUS 3C PROTEASE, ethyl (4R)-4-[[(2S,4S)-1-[(2S)-3-methyl-2-[(5-methyl-1,2-oxazol-3-yl)carbonylamino]butanoyl]-4-phenyl-pyrrolidin-2-yl]carbonylamino]-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pentanoate
著者Kawatkar, S, Ek, M, Hoesch, V, Gagnon, M, Nilsson, E, Lister, T, Olsson, L, Patel, J, Yu, Q.
登録日2016-02-24
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Design and Structure-Activity Relationships of Novel Inhibitors of Human Rhinovirus 3C Protease.
Bioorg.Med.Chem.Lett., 26, 2016
7QYM
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Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-18 (R207V, D210P, S211W)
分子名称: Beta-aspartyl-peptidase, CHLORIDE ION, Isoaspartyl peptidase, ...
著者Loch, J.I, Klonecka, A, Kadziolka, K, Bonarek, P, Barciszewski, J, Imiolczyk, B, Brzezinski, K, Jaskolski, M.
登録日2022-01-28
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase.
Acta Crystallogr D Struct Biol, 78, 2022

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件を2024-09-04に公開中

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