Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52161 件

8Z5L
DownloadVisualize
BU of 8z5l by Molmil
Crystal structure of metallo-beta-lactamse, IMP-1, complexed with a quinolinone-based inhibitor
分子名称: 3-[2-azanyl-5-[2-cyclohexylethyl-[3-(4-methylphenoxy)propyl]amino]phenyl]propanoic acid, Metallo-beta-lactamase type 2, ZINC ION
著者Kamo, T, Kuroda, K, Nimura, S, Guo, Y, Kondo, S, Nukaga, M, Hoshino, T.
登録日2024-04-18
公開日2024-05-08
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Development of Inhibitory Compounds for Metallo-beta-lactamase through Computational Design and Crystallographic Analysis.
Biochemistry, 63, 2024
7QUX
DownloadVisualize
BU of 7qux by Molmil
Crystal structure of P7C8 bound to CK2alpha
分子名称: ADENOSINE-5'-DIPHOSPHATE, CARBAMIC ACID, Casein kinase II subunit alpha, ...
著者Atkinson, E, Iegre, J, Brear, P, Baker, D, Sore, H, Hyvonen, M, Spring, D.
登録日2022-01-19
公開日2022-12-28
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Development of small cyclic peptides targeting the CK2 alpha / beta interface.
Chem.Commun.(Camb.), 58, 2022
4M3P
DownloadVisualize
BU of 4m3p by Molmil
Betaine-Homocysteine S-Methyltransferase from Homo sapiens complexed with Homocysteine
分子名称: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, Betaine--homocysteine S-methyltransferase 1, POTASSIUM ION, ...
著者Koutmos, M, Yamada, K, Mladkova, J, Paterova, J, Diamond, C.E, Tryon, K, Jungwirth, P, Garrow, T.A, Jiracek, J.
登録日2013-08-06
公開日2014-06-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Specific potassium ion interactions facilitate homocysteine binding to betaine-homocysteine S-methyltransferase.
Proteins, 82, 2014
4MHR
DownloadVisualize
BU of 4mhr by Molmil
Crystal structure of EctD from S. alaskensis in its apoform
分子名称: Ectoine hydroxylase
著者Widderich, N, Hoeppner, A, Pittelkow, M, Heider, J, Smits, S.H, Bremer, E.
登録日2013-08-30
公開日2014-09-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the ectoine hydroxylase, a snapshot of the active site.
J.Biol.Chem., 289, 2014
5J81
DownloadVisualize
BU of 5j81 by Molmil
Crystal structure of Glycoprotein C from Puumala virus in the post-fusion conformation (pH 6.0)
分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ACETATE ION, Envelopment polyprotein, ...
著者Willensky, S, Dessau, M.
登録日2016-04-07
公開日2016-10-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Glycoprotein C from a Hantavirus in the Post-fusion Conformation.
Plos Pathog., 12, 2016
3ZRX
DownloadVisualize
BU of 3zrx by Molmil
The high resolution structure of a dimeric Hamp-Dhp fusion displays strong asymmetry
分子名称: AF1503 PROTEIN, OSMOLARITY SENSOR PROTEIN ENVZ
著者Zeth, K, Hulko, M, Martin, J.
登録日2011-06-20
公開日2011-06-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Mechanism of Regulation of Receptor Histidine Kinases.
Structure, 20, 2012
5JES
DownloadVisualize
BU of 5jes by Molmil
Human carbonic anhydrase II (V121T) complexed with benzo[d]thiazole-2-sulfonamide
分子名称: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
著者Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
登録日2016-04-18
公開日2017-01-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.205 Å)
主引用文献Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
7QNV
DownloadVisualize
BU of 7qnv by Molmil
human carbonic anhydrase II bound to 3-methylbenzoselenoate
分子名称: 3-methylbenzoselenoate, Carbonic anhydrase 2, GLYCEROL, ...
著者Angeli, A, Ferraroni, M.
登録日2021-12-22
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.278 Å)
主引用文献Benzoselenoates: A novel class of carbonic anhydrase inhibitors.
Bioorg.Chem., 122, 2022
7QOB
DownloadVisualize
BU of 7qob by Molmil
Human Carbonic Anhydrase I in complex with benzoselenoate
分子名称: Carbonic anhydrase 1, ZINC ION, benzoselenoate
著者Angeli, A, Ferraroni, M.
登録日2021-12-23
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Benzoselenoates: A novel class of carbonic anhydrase inhibitors.
Bioorg.Chem., 122, 2022
5JN2
DownloadVisualize
BU of 5jn2 by Molmil
Crystal structure of TgCDPK1 bound to NVPACU106
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Calmodulin-domain protein kinase 1, ...
著者El Bakkouri, M, Walker, J.R, Loppnau, P, Graslund, S, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Hui, R, Lovato, D.V, Structural Genomics Consortium (SGC)
登録日2016-04-29
公開日2016-05-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of TgCDPK1 bound to NVPACU106
To Be Published
7XM1
DownloadVisualize
BU of 7xm1 by Molmil
Cryo-EM structure of mTIP60-Ba (metal-ion induced TIP60 (K67E) complex with barium ions
分子名称: BARIUM ION, TIP60 K67E mutant
著者Ohara, N, Kawakami, N, Arai, R, Adachi, N, Moriya, T, Kawasaki, M, Miyamoto, K.
登録日2022-04-24
公開日2023-01-04
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Reversible Assembly of an Artificial Protein Nanocage Using Alkaline Earth Metal Ions.
J.Am.Chem.Soc., 145, 2023
5ITR
DownloadVisualize
BU of 5itr by Molmil
Crystal Structure of Human NEIL1(P2G) bound to duplex DNA containing THF
分子名称: DNA (26-MER), Endonuclease 8-like 1
著者Zhu, C, Lu, L, Zhang, J, Yue, Z, Song, J, Zong, S, Liu, M, Stovicek, O, Gao, Y, Yi, C.
登録日2016-03-17
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
Proc.Natl.Acad.Sci.USA, 113, 2016
7QVK
DownloadVisualize
BU of 7qvk by Molmil
NM-02 in complex with HER2-ECD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, NM-02, Receptor tyrosine-protein kinase erbB-2, ...
著者Cowan, R, Hall, G, Carr, M.
登録日2022-01-21
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Co-crystallisation and humanisation of an anti-HER2 single-domain antibody as a theranostic tool.
Plos One, 18, 2023
3ZX0
DownloadVisualize
BU of 3zx0 by Molmil
NTPDase1 in complex with Heptamolybdate
分子名称: ACETIC ACID, CHLORIDE ION, ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 1, ...
著者Zebisch, M, Schaefer, P, Straeter, N.
登録日2011-08-04
公開日2011-11-30
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallographic evidence for a domain motion in rat nucleoside triphosphate diphosphohydrolase (NTPDase) 1.
J. Mol. Biol., 415, 2012
5IY4
DownloadVisualize
BU of 5iy4 by Molmil
Crystal structure of human PCNA in complex with the PIP box of DVC1
分子名称: DVC1 PIP box, Proliferating cell nuclear antigen
著者Jiang, T, Xu, M, Wang, Y.
登録日2016-03-24
公開日2016-06-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.945 Å)
主引用文献Crystal structure of human PCNA in complex with the PIP box of DVC1
Biochem.Biophys.Res.Commun., 474, 2016
5IZN
DownloadVisualize
BU of 5izn by Molmil
The crystal structure of 50S ribosomal protein L25 from Vibrio vulnificus CMCP6
分子名称: 50S ribosomal protein L25, PHOSPHATE ION
著者Tan, K, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-03-25
公開日2016-04-06
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The crystal structure of 50S ribosomal protein L25 from Vibrio vulnificus CMCP6
To Be Published
3ZRW
DownloadVisualize
BU of 3zrw by Molmil
The structure of the dimeric Hamp-Dhp fusion A291V mutant
分子名称: AF1503 PROTEIN, OSMOLARITY SENSOR PROTEIN ENVZ
著者Zeth, K, Hulko, M, Ferris, H.U, Martin, J, Lupas, A.N.
登録日2011-06-20
公開日2011-06-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mechanism of Regulation of Receptor Histidine Kinases.
Structure, 20, 2012
5J02
DownloadVisualize
BU of 5j02 by Molmil
Structure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+, MG2+ and an inactive 5' exon.
分子名称: 5' EXON ANALOG (5'-R(*CP*UP*GP*UP*UP*AP*(5MU))-3'), AMMONIUM ION, GROUP II INTRON LARIAT, ...
著者Costa, M, Walbott, H, Monachello, D, Westhof, E, Michel, F.
登録日2016-03-26
公開日2016-12-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.493 Å)
主引用文献Crystal structures of a group II intron lariat primed for reverse splicing.
Science, 354, 2016
5J2W
DownloadVisualize
BU of 5j2w by Molmil
Intermediate state lying on the pathway of release of Tat from HIV-1 TAR.
分子名称: Apical region (29mer) of the HIV-1 TAR RNA element, Cyclic peptide mimetic of HIV-1 Tat
著者Borkar, A.N, Bardaro Jr, M.F, Varani, G, Vendruscolo, M.
登録日2016-03-30
公開日2016-06-08
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Structure of a low-population binding intermediate in protein-RNA recognition.
Proc.Natl.Acad.Sci.USA, 113, 2016
7Q4H
DownloadVisualize
BU of 7q4h by Molmil
A thermostable lipase from Thermoanaerobacter thermohydrosulfuricus in complex with PMSF
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, GLYCEROL, ...
著者Pinotsis, N, Wilmanns, M.
登録日2021-10-30
公開日2023-05-10
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.00003219 Å)
主引用文献Discovery of a non-canonical prototype long-chain monoacylglycerol lipase through a structure-based endogenous reaction intermediate complex.
Nat Commun, 14, 2023
7Q4J
DownloadVisualize
BU of 7q4j by Molmil
A thermostable lipase from Thermoanaerobacter thermohydrosulfuricus in complex a monoacylglycerol intermediate
分子名称: CHLORIDE ION, DECANE, GLYCEROL, ...
著者Pinotsis, N, Wilmanns, M.
登録日2021-10-31
公開日2023-05-10
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Discovery of a non-canonical prototype long-chain monoacylglycerol lipase through a structure-based endogenous reaction intermediate complex.
Nat Commun, 14, 2023
8ZMU
DownloadVisualize
BU of 8zmu by Molmil
GLUTAMATE DEHYDROGENASE (W89F-MUTANT) FROM THERMOCOCCUS PROFUNDUS IN THE UNLIGANDED STATE
分子名称: ACETIC ACID, GLYCEROL, Glutamate dehydrogenase, ...
著者Wakabayashi, T, Matsui, Y, Masayoshi, M.
登録日2024-05-23
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.028 Å)
主引用文献Mechanism for drastic reduction in catalytic activity of Trp89Phe-mutated glutamate dehydrogenase revealed by cryoEM-sampling metastable conformation in action
To Be Published
3ZR4
DownloadVisualize
BU of 3zr4 by Molmil
STRUCTURAL EVIDENCE FOR AMMONIA TUNNELING ACROSS THE (BETA-ALPHA)8 BARREL OF THE IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE BIENZYME COMPLEX
分子名称: GLUTAMINE, GLYCEROL, IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF, ...
著者Vega, M.C, Kuper, J, Haeger, M.C, Mohrlueder, J, Marquardt, S, Sterner, R, Wilmanns, M.
登録日2011-06-13
公開日2012-10-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Catalysis Uncoupling in a Glutamine Amidotransferase Bienzyme by Unblocking the Glutaminase Active Site.
Chem.Biol., 19, 2012
7QAC
DownloadVisualize
BU of 7qac by Molmil
The T2 structure of polycrystalline cubic human insulin
分子名称: Insulin A chain, Insulin B chain
著者Karavassili, F, Triandafillidis, D.P, Valmas, A, Spiliopoulou, M, Fili, S, Kontou, P, Bowler, M.W, Von Dreele, R.B, Fitch, A, Margiolaki, I.
登録日2021-11-16
公開日2023-06-21
最終更新日2024-10-09
実験手法POWDER DIFFRACTION (2.29 Å)
主引用文献The T 2 structure of polycrystalline cubic human insulin.
Acta Crystallogr D Struct Biol, 79, 2023
5JEG
DownloadVisualize
BU of 5jeg by Molmil
Human carbonic anhydrase II (V121I) complexed with benzo[d]thiazole-2-sulfonamide
分子名称: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
著者Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
登録日2016-04-18
公開日2017-01-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon