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PDB: 52230 件

7EAP
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Crystal structure of IpeA-XXXG complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Matsuzawa, T, Watanabe, M, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-03-08
公開日2022-03-16
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structural basis for the catalytic mechanism of the glycoside hydrolase family 3 isoprimeverose-producing oligoxyloglucan hydrolase from Aspergillus oryzae.
Febs Lett., 596, 2022
3EM6
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BU of 3em6 by Molmil
Crystal structure of I50L/A71V mutant of hiv-1 protease in complex with inhibitor darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, ACETATE ION, PHOSPHATE ION, ...
著者Royer, C.J, King, N.M, Prabu-Jeyabalan, M, Ng, C, Nalivaika, E.A, Schiffer, C.A.
登録日2008-09-23
公開日2009-09-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Kinetic and structural studies on atazanavir specific I50L drug-resistant HIV-1 protease mutant.
To be Published
7EAW
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Trehalase of Arabidopsis thaliana acid mutant -D380A trehalose complex
分子名称: GLYCEROL, Trehalase, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Taguchi, Y, Saburi, W, Yu, J, Imai, R, Yao, M, Mori, H.
登録日2021-03-08
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
To Be Published
7Y00
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BU of 7y00 by Molmil
Cryo-EM structure of the nucleosome containing 169 base-pair DNA with a p53 target sequence
分子名称: DNA (169-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H.
登録日2022-06-03
公開日2022-10-19
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Structural basis for p53 binding to its nucleosomal target DNA sequence.
Pnas Nexus, 1, 2022
3E6Y
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Structure of 14-3-3 in complex with the differentiation-inducing agent Cotylenin A
分子名称: 14-3-3-like protein C, CHLORIDE ION, Cotylenin A, ...
著者Ottmann, C, Weyand, M, Wittinghofer, A, Oecking, C.
登録日2008-08-17
公開日2009-03-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A structural rationale for selective stabilization of anti-tumor interactions of 14-3-3 proteins by cotylenin A
J.Mol.Biol., 386, 2009
7XZC
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BU of 7xzc by Molmil
Mutant (R240A) of the N-terminal domain of fucoidan lyase FdlA
分子名称: Fucoidan lyase
著者Wang, J, Li, M, Pan, X.
登録日2022-06-02
公開日2022-09-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Biochemical Analysis Reveals Catalytic Mechanism of Fucoidan Lyase from Flavobacterium sp. SA-0082.
Mar Drugs, 20, 2022
3E7N
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Crystal structure of d-ribose high-affinity transport system from salmonella typhimurium lt2
分子名称: 1,2-ETHANEDIOL, D-ribose high-affinity transport system
著者Nocek, B, Maltseva, N, Gu, M, Joachimiak, A, Anderson, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2008-08-18
公開日2008-08-26
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of d-ribose high-affinity transport system from salmonella typhimurium lt2
To be Published
3E4B
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BU of 3e4b by Molmil
Crystal structure of AlgK from Pseudomonas fluorescens WCS374r
分子名称: AlgK, CHLORIDE ION, GLYCEROL
著者Keiski, C.-L, Harwich, M, Jain, S, Neculai, A.M, Yip, P, Robinson, H, Whitney, J.C, Burrows, L.L, Ohman, D.E, Howell, P.L.
登録日2008-08-11
公開日2009-08-25
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献AlgK is a TPR-containing protein and the periplasmic component of a novel exopolysaccharide secretin.
Structure, 18, 2010
7EFI
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RNA kink-turn motif composed of RNA, DNA and 2'-O-methyl RNA
分子名称: DNA/RNA (5'-R(*GP*GP*CP*GP*AP*AP*GP*AP*AP*CP*CP*(OMG)P*(OMG)P*(OMG))-D(P*GP*A)-R(P*GP*(OMC)P*(OMC))-3')
著者Kondo, J, Nagashima, M.
登録日2021-03-21
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献RNA kink-turn motif composed of RNA, DNA and 2'-O-methyl RNA
To Be Published
3E7L
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BU of 3e7l by Molmil
Crystal structure of sigma54 activator NtrC4's DNA binding domain
分子名称: Transcriptional regulator (NtrC family), ZINC ION
著者Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E.
登録日2008-08-18
公開日2008-11-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.252 Å)
主引用文献Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation.
J.Mol.Biol., 384, 2008
7EFH
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RNA kink-turn motif
分子名称: RNA (5'-R(*GP*GP*CP*GP*AP*AP*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3')
著者Kondo, J, Nagashima, M.
登録日2021-03-21
公開日2022-03-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献RNA kink-turn motif
To Be Published
7Y8Q
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BU of 7y8q by Molmil
Amyloid-beta assemblage on GM1-containing membranes
分子名称: Amyloid-beta protein 40
著者Yagi-Utsumi, M, Itoh, S.G, Okumura, H, Yanagisawa, K, Kato, K, Nishimura, K.
登録日2022-06-24
公開日2023-07-05
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献The Double-Layered Structure of Amyloid-beta Assemblage on GM1-Containing Membranes Catalytically Promotes Fibrillization.
Acs Chem Neurosci, 14, 2023
7EI2
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BU of 7ei2 by Molmil
Structure of human NNMT in complex with macrocyclic peptide 8
分子名称: Nicotinamide N-methyltransferase, macrocyclic peptide 8
著者Hayashi, K, Mikamiyama, H, Uehara, S, Yamamoto, S, Cary, D, Nishikawa, J, Ueda, T, Ozasa, H, Mihara, K, Yoshimura, N, Kawai, T, Ono, T, Yamamoto, S, Fumoto, M.
登録日2021-03-30
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell.
Acs Med.Chem.Lett., 12, 2021
3EEQ
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BU of 3eeq by Molmil
Crystal structure of a putative cobalamin biosynthesis protein G homolog from Sulfolobus solfataricus
分子名称: SULFATE ION, putative Cobalamin biosynthesis protein G homolog
著者Bonanno, J.B, Gilmore, M, Bain, K.T, Chang, S, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-09-05
公開日2008-09-30
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a putative cobalamin biosynthesis protein G homolog from Sulfolobus solfataricus
To be Published
7EIF
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BU of 7eif by Molmil
Crystal structure of GAS41 YEATS domain
分子名称: GLYCEROL, YEATS domain-containing protein 4
著者Kikuchi, M, Umehara, T.
登録日2021-03-30
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献GAS41 promotes H2A.Z deposition through recognition of the N terminus of histone H3 by the YEATS domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
7ELK
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BU of 7elk by Molmil
Solution structure of Terfa derived from Danio rerio
分子名称: Terfa protein
著者Yun, J.H, Kim, M, Lee, W.
登録日2021-04-11
公開日2022-04-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of Terfa derived from Danio rerio
To Be Published
7EFG
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BU of 7efg by Molmil
RNA kink-turn motif
分子名称: RNA (5'-R(*GP*GP*CP*GP*AP*AP*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3')
著者Kondo, J, Nagashima, M.
登録日2021-03-21
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献RNA kink-turn motif
To Be Published
3ELL
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BU of 3ell by Molmil
Structure of the hemophore from Pseudomonas aeruginosa (HasAp)
分子名称: HasAp (Heme acquisition protein HasAp), PROTOPORPHYRIN IX CONTAINING FE
著者Schonbrunn, E, Rivera, M.
登録日2008-09-22
公開日2009-01-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural characterization of the hemophore HasAp from Pseudomonas aeruginosa: NMR spectroscopy reveals protein-protein interactions between Holo-HasAp and hemoglobin.
Biochemistry, 48, 2009
3EIF
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1.9 angstrom crystal structure of the active form of the C5a peptidase from Streptococcus pyogenes (ScpA)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, C5a peptidase, CALCIUM ION, ...
著者Cooney, J.C, Kagawa, T.F, O'Connell, M.R, Paoli, M, Mouat, P, O'Toole, P.W.
登録日2008-09-15
公開日2009-02-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Model for Substrate Interactions in C5a Peptidase from Streptococcus pyogenes: A 1.9 A Crystal Structure of the Active Form of ScpA
J.Mol.Biol., 386, 2009
7EKU
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Crystal Structure of the Candida Glabrata Glycogen Debranching Enzyme (W958A)
分子名称: 4-alpha-glucanotransferase
著者Shen, M, Xiang, S.
登録日2021-04-06
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure of the Candida Glabrata Glycogen Debranching Enzyme (W958A)
To Be Published
6K8M
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High resolution crystal structure of proteinase K with thiourea
分子名称: CHLORIDE ION, Proteinase K, SULFATE ION, ...
著者Ahmad, M.S, Akbar, Z, Choudhary, M.I.
登録日2019-06-13
公開日2019-12-25
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献High resolution crystal structure of proteinase K with thiourea
Bioorganic Chemistry, 2019
3B1X
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BU of 3b1x by Molmil
Crystal structure of an S. thermophilus NFeoB E66A mutant bound to GMPPNP
分子名称: Ferrous iron uptake transporter protein B, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Ash, M.R, Maher, M.J, Guss, J.M, Jormakka, M.
登録日2011-07-15
公開日2011-11-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献A suite of Switch I and Switch II mutant structures from the G-protein domain of FeoB
Acta Crystallogr.,Sect.D, 67, 2011
7EG5
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FMN-bound form of YviC from Lactococcus lactis subsp. lactis Il1403
分子名称: FLAVIN MONONUCLEOTIDE, FMN-binding protein
著者Sugiura, N, Nakanishi, T, Kitamura, M.
登録日2021-03-24
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献FMN-bound form of YviC from Lactococcus lactis subsp. lactis Il1403
To Be Published
3B0P
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tRNA-dihydrouridine synthase from Thermus thermophilus
分子名称: FLAVIN MONONUCLEOTIDE, tRNA-dihydrouridine synthase
著者Yu, F, Tanaka, Y, Yamashita, K, Nakamura, A, Yao, M, Tanaka, I.
登録日2011-06-12
公開日2011-12-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular basis of dihydrouridine formation on tRNA
Proc.Natl.Acad.Sci.USA, 108, 2011
3B4M
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Crystal Structure of Human PABPN1 RRM
分子名称: Polyadenylate-binding protein 2
著者Ge, H, Zhou, D, Teng, M, Niu, L.
登録日2007-10-24
公開日2008-01-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Crystal structure and possible dimerization of the single RRM of human PABPN1
Proteins, 71, 2008

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件を2024-11-06に公開中

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