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PDB: 51787 件

3WYO
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Heterodimeric myoglobin formed by domain swapping
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y.W, Nagao, S, Zhang, M, Shomura, Y, Higuchi, Y, Hirota, S.
登録日2014-09-04
公開日2014-11-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rational design of heterodimeric protein using domain swapping for myoglobin.
Angew.Chem.Int.Ed.Engl., 54, 2015
3WZ0
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On archaeal homologs of the human RNase P proteins Pop5 and Rpp30 in the hyperthermophilic archaeon Thermococcus kodakarensis
分子名称: Ribonuclease P protein component 2, Ribonuclease P protein component 3
著者Suematsu, K, Ueda, T, Nakashima, T, Kakuta, Y, Kimura, M.
登録日2014-09-11
公開日2015-09-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献On archaeal homologs of the human RNase P proteins Pop5 and Rpp30 in the hyperthermophilic archaeon Thermococcus kodakarensis.
Biosci.Biotechnol.Biochem., 79, 2015
4XLL
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Toxoplasma gondii DJ-1, oxidized
分子名称: DJ-1 family protein
著者Child, M.A, Wilson, M.A, Reese, M.L, Bogyo, M.
登録日2015-01-13
公開日2015-02-11
最終更新日2016-07-27
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Toxoplasma DJ-1 regulates microneme exocytosis through an association with the plant-like kinase, CDPK1
To Be Published
4EQZ
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Crystal structure of human DOT1L in complex with inhibitor FED2
分子名称: 5'-deoxy-5'-[(3-{[(4-methylphenyl)carbamoyl]amino}propyl)(propan-2-yl)amino]adenosine, Histone-lysine N-methyltransferase, H3 lysine-79 specific, ...
著者Wernimont, A.K, Tempel, W, Yu, W, Li, Y, Nguyen, K.T, Federation, A, Marineau, J, Qi, J, Vedadi, M, Bradner, J.E, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2012-04-19
公開日2012-05-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Catalytic site remodelling of the DOT1L methyltransferase by selective inhibitors.
Nat Commun, 3, 2012
7ZWG
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The Crystal structure of RO4493940 bound to CK2alpha
分子名称: (5~{Z})-5-(quinolin-6-ylmethylidene)-1,3-thiazolidine-2,4-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, ...
著者Brear, P, Hyvonen, M.
登録日2022-05-19
公開日2023-05-31
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Chemical proteomics reveals the target landscape of 1,000 kinase inhibitors.
Nat.Chem.Biol., 20, 2024
7ZWE
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BU of 7zwe by Molmil
The Crystal structure of GW8695 bound to CK2alpha
分子名称: 7-(1~{H}-indol-2-yl)-5-methyl-~{N}-(3,4,5-trimethoxyphenyl)imidazo[5,1-f][1,2,4]triazin-2-amine, Casein kinase II subunit alpha
著者Brear, P, Hyvonen, M.
登録日2022-05-19
公開日2023-05-31
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Chemical proteomics reveals the target landscape of 1,000 kinase inhibitors.
Nat.Chem.Biol., 20, 2024
7ZKD
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The NMR structure of the MAX47 effector from Magnaporthe Oryzae
分子名称: MAX effector protein
著者Lahfa, M, Padilla, A, de Guillen, K, Pissarra, J, Raji, M, Cesari, S, Kroj, T, Gladieux, P, Roumestand, C, Barthe, P.
登録日2022-04-12
公開日2023-04-26
最終更新日2024-09-04
実験手法SOLUTION NMR
主引用文献The structural landscape and diversity of Pyricularia oryzae MAX effectors revisited.
Plos Pathog., 20, 2024
3X2O
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Neutron and X-ray joint refined structure of PcCel45A apo form at 298K.
分子名称: Endoglucanase V-like protein
著者Nakamura, A, Ishida, T, Kusaka, K, Yamada, T, Tanaka, I, Niimura, N, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-07
最終更新日2019-12-18
実験手法NEUTRON DIFFRACTION (1.5 Å), X-RAY DIFFRACTION
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2M
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X-ray structure of PcCel45A with cellopentaose at 0.64 angstrom resolution.
分子名称: Endoglucanase V-like protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (0.64 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
2L4J
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Yap ww2
分子名称: Yes-associated protein 2 (YAP2)
著者Webb, C, Upadhyay, A, Furutani-Seiki, M, Bagby, S.
登録日2010-10-07
公開日2010-11-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Features and Ligand Binding Properties of Tandem WW Domains from YAP and TAZ, Nuclear Effectors of the Hippo Pathway.
Biochemistry, 50, 2011
2L0W
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Solution NMR structure of the N-terminal PAS domain of HERG potassium channel
分子名称: Potassium voltage-gated channel, subfamily H (Eag-related), member 2, ...
著者Ng, C.A, Hunter, M.J, Mobli, M, King, G.F, Kuchel, P.W, Vandenberg, J.I.
登録日2010-07-19
公開日2011-01-26
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The N-Terminal Tail of hERG Contains an Amphipathic alpha-Helix That Regulates Channel Deactivation
PLoS ONE, 6, 2011
3X42
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Crystal structure of copper amine oxidase from Arthrobacter globiformis in the presence of sodium bromide
分子名称: BROMIDE ION, COPPER (II) ION, GLYCEROL, ...
著者Okajima, T, Nakanishi, S, Murakawa, T, Kataoka, M, Hayashi, H, Hamaguchi, A, Nakai, T, Kawano, Y, Yamaguchi, H, Tanizawa, K.
登録日2015-03-10
公開日2015-08-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.875 Å)
主引用文献Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions.
J.Biol.Chem., 290, 2015
3WZ8
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BU of 3wz8 by Molmil
Endothiapepsin in complex with Gewald reaction-derived inhibitor (8)
分子名称: DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, Endothiapepsin, ...
著者Kuhnert, M, Steuber, H, Diederich, W.E.
登録日2014-09-19
公開日2015-08-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Tracing binding modes in hit-to-lead optimization: chameleon-like poses of aspartic protease inhibitors
Angew.Chem.Int.Ed.Engl., 54, 2015
1LZ4
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BU of 1lz4 by Molmil
ENTHALPIC DESTABILIZATION OF A MUTANT HUMAN LYSOZYME LACKING A DISULFIDE BRIDGE BETWEEN CYSTEINE-77 AND CYSTEINE-95
分子名称: HUMAN LYSOZYME
著者Inaka, K, Matsushima, M, Kuroki, R, Taniyama, Y, Kikuchi, M.
登録日1993-02-03
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Enthalpic destabilization of a mutant human lysozyme lacking a disulfide bridge between cysteine-77 and cysteine-95.
Biochemistry, 31, 1992
2LD3
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BU of 2ld3 by Molmil
Solution structure of myosin VI lever arm extension
分子名称: Myosin VI
著者Feng, W, Yu, C, Zhang, M.
登録日2011-05-13
公開日2012-05-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Membrane-induced lever arm expansion allows myosin VI to walk with large and variable step sizes
To be Published
3X0Y
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BU of 3x0y by Molmil
Crystal structure of FMN-bound DszC from Rhodococcus erythropolis D-1
分子名称: DszC, FLAVIN MONONUCLEOTIDE
著者Guan, L.J, Lee, W.C, Wang, S.P, Ohtsuka, J, Tanokura, M.
登録日2014-10-23
公開日2015-02-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of apo-DszC and FMN-bound DszC from Rhodococcus erythropolis D-1.
Febs J., 282, 2015
3X2P
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BU of 3x2p by Molmil
Neutron and X-ray joint refined structure of PcCel45A with cellopentaose at 298K.
分子名称: Endoglucanase V-like protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Nakamura, A, Ishida, T, Kusaka, K, Yamada, T, Tanaka, I, Niimura, N, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-14
最終更新日2020-07-29
実験手法NEUTRON DIFFRACTION (1.518 Å), X-RAY DIFFRACTION
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
2LHI
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BU of 2lhi by Molmil
Solution structure of Ca2+/CNA1 peptide-bound yCaM
分子名称: CALCIUM ION, Calmodulin,Serine/threonine-protein phosphatase 2B catalytic subunit A1
著者Ogura, K, Takahashi, K, Kobashigawa, Y, Yoshida, R, Itoh, H, Yazawa, M, Inagaki, F.
登録日2011-08-10
公開日2012-08-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structures of yeast Saccharomyces cerevisiae calmodulin in calcium- and target peptide-bound states reveal similarities and differences to vertebrate calmodulin.
Genes Cells, 17, 2012
3X31
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Crystal structure of the human vitamin D receptor ligand binding domain complexed with 7,8-cis-14-epi-1a,25-Dihydroxy-19-norvitamin D3
分子名称: (1R,3R,7Z,14beta,17alpha)-17-[(2R)-6-hydroxy-6-methylheptan-2-yl]-9,10-secoestra-5,7-diene-1,3-diol, Vitamin D3 receptor
著者Kakuda, S, Takimoto-Kamimura, M.
登録日2015-01-13
公開日2016-01-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Revisiting the 7,8-cis-vitamin D3 derivatives: synthesis, evaluating the biological activity, and study of the binding configuration
To be Published
2LM7
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NMR structure of the C-terminal domain of VP7 in membrane mimicking micelles
分子名称: Outer capsid glycoprotein VP7
著者Elaid, S, Libersou, S, Ouldali, M, Morellet, N, Lepault, J, Bouaziz, S.
登録日2011-11-23
公開日2012-10-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR structure of the C-terminal domain of VP7 in membrane mimicking micelles
To be Published
3XIS
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BU of 3xis by Molmil
A METAL-MEDIATED HYDRIDE SHIFT MECHANISM FOR XYLOSE ISOMERASE BASED ON THE 1.6 ANGSTROMS STREPTOMYCES RUBIGINOSUS STRUCTURES WITH XYLITOL AND D-XYLOSE
分子名称: D-xylose, MAGNESIUM ION, XYLOSE ISOMERASE, ...
著者Whitlow, M, Howard, A.J.
登録日1991-03-25
公開日1992-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A metal-mediated hydride shift mechanism for xylose isomerase based on the 1.6 A Streptomyces rubiginosus structures with xylitol and D-xylose.
Proteins, 9, 1991
3X44
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BU of 3x44 by Molmil
Crystal structure of O-ureido-L-serine-bound K43A mutant of O-ureido-L-serine synthase
分子名称: (E)-O-(carbamoylamino)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serine, O-ureido-L-serine synthase
著者Matoba, Y, Uda, N, Oda, K, Sugiyama, M.
登録日2015-03-13
公開日2015-07-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structural and mutational analyses of O-ureido-L-serine synthase necessary for D-cycloserine biosynthesis.
Febs J., 282, 2015
2LL6
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Solution NMR structure of CaM bound to iNOS CaM binding domain peptide
分子名称: Calmodulin, Nitric oxide synthase, inducible
著者Piazza, M, Futrega, K, Spratt, D.E, Dieckmann, T, Guillemette, J.G.
登録日2011-10-29
公開日2012-05-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and Dynamics of Calmodulin (CaM) Bound to Nitric Oxide Synthase Peptides: Effects of a Phosphomimetic CaM Mutation.
Biochemistry, 51, 2012
4EFL
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BU of 4efl by Molmil
Crystal structure of H-Ras WT in complex with GppNHp (state 1)
分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Muraoka, S, Shima, F, Araki, M, Inoue, T, Yoshimoto, A, Ijiri, Y, Seki, N, Tamura, A, Kumasaka, T, Yamamoto, M, Kataoka, T.
登録日2012-03-30
公開日2012-05-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of the state 1 conformations of the GTP-bound H-Ras protein and its oncogenic G12V and Q61L mutants
Febs Lett., 586, 2012
3WY1
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Crystal structure of alpha-glucosidase
分子名称: (3R,5R,7R)-octane-1,3,5,7-tetracarboxylic acid, Alpha-glucosidase, GLYCEROL, ...
著者Shen, X, Gai, Z, Kato, K, Yao, M.
登録日2014-08-18
公開日2015-06-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural analysis of the alpha-glucosidase HaG provides new insights into substrate specificity and catalytic mechanism
Acta Crystallogr. D Biol. Crystallogr., 71, 2015

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