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PDB: 51964 件

4OPJ
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Bh-RNaseH:tcdA-DNA complex
分子名称: 5'-D(*CP*GP*CP*GP*AP*(TCY)P*TP*TP*CP*GP*CP*G)-3', GLYCEROL, Ribonuclease H
著者Pallan, P.S, Egli, M.
登録日2014-02-05
公開日2015-02-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.541 Å)
主引用文献Generating Crystallographic Models of DNA Dodecamers from Structures of RNase H:DNA Complexes.
Methods Mol.Biol., 1320
4K5U
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Recognition of the BG-H Antigen by a Lamprey Variable Lymphocyte Receptor
分子名称: Variable lymphocyte receptor, beta-D-galactopyranose
著者Luo, M, Velikovsky, C.A, Yang, X.B, Mariuzza, R.A.
登録日2013-04-15
公開日2013-06-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Recognition of the thomsen-friedenreich pancarcinoma carbohydrate antigen by a lamprey variable lymphocyte receptor.
J.Biol.Chem., 288, 2013
4O6S
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1.32A resolution structure of the hemophore HasA from Pseudomonas aeruginosa (H83A mutant, Zinc Bound)
分子名称: 1,2-ETHANEDIOL, HasAp, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Lovell, S, Kumar, R, Battaile, K.P, Matsumura, H, Yao, H, Rodriguez, J.C, Moenne-Loccoz, P, Rivera, M.
登録日2013-12-23
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Replacing the Axial Ligand Tyrosine 75 or Its Hydrogen Bond Partner Histidine 83 Minimally Affects Hemin Acquisition by the Hemophore HasAp from Pseudomonas aeruginosa.
Biochemistry, 53, 2014
4K7S
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Crystal structure of Zn2-hUb (human ubiquitin) adduct from a solution 35 mM zinc acetate/1.3 mM hUb
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ZINC ION, ...
著者Fermani, S, Falini, G, Calvaresi, M, Bottoni, A, Arnesano, F, Natile, G.
登録日2013-04-17
公開日2013-05-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Conformational selection of ubiquitin quaternary structures driven by zinc ions.
Chemistry, 19, 2013
6TK2
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Femtosecond to millisecond structural changes in a light-driven sodium pump: 1ms structure of KR2 with extrapolated, light and dark datasets
分子名称: EICOSANE, RETINAL, SODIUM ION, ...
著者Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
登録日2019-11-28
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
4FK6
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JAK1 kinase (JH1 domain) in complex with compound 72
分子名称: N-({1-[(1R,2R,4S)-bicyclo[2.2.1]hept-2-yl]-1,6-dihydroimidazo[4,5-d]pyrrolo[2,3-b]pyridin-2-yl}methyl)methanesulfonamide, Tyrosine-protein kinase JAK1
著者Eigenbrot, C, Steffek, M.
登録日2012-06-12
公開日2012-11-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-based discovery of C-2 substituted imidazo-pyrrolopyridine JAK1 inhibitors with improved selectivity over JAK2.
Bioorg.Med.Chem.Lett., 22, 2012
6FZ7
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Crystal Structure of lipase from Geobacillus stearothermophilus T6 methanol stable variant L184F
分子名称: CALCIUM ION, Lipase, ZINC ION
著者Gihaz, S, Kanteev, M, Pazy, Y, Fishman, A.
登録日2018-03-14
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.736 Å)
主引用文献Filling the Void: Introducing Aromatic Interactions into Solvent Tunnels To Enhance Lipase Stability in Methanol.
Appl.Environ.Microbiol., 84, 2018
4ZY3
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Crystal Structure of Keap1 in Complex with a small chemical compound, K67
分子名称: FORMIC ACID, Kelch-like ECH-associated protein 1, N,N'-[2-(2-oxopropyl)naphthalene-1,4-diyl]bis(4-ethoxybenzenesulfonamide)
著者Fukutomi, T, Iso, T, Suzuki, T, Takagi, K, Mizushima, T, Komatsu, M, Yamamoto, M.
登録日2015-05-21
公開日2016-05-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献p62/Sqstm1 promotes malignancy of HCV-positive hepatocellular carcinoma through Nrf2-dependent metabolic reprogramming
Nat Commun, 7, 2016
1KBE
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Solution structure of the cysteine-rich C1 domain of Kinase Suppressor of Ras
分子名称: Kinase Suppressor of Ras, ZINC ION
著者Zhou, M, Horita, D.A, Waugh, D.S, Byrd, R.A, Morrison, D.K.
登録日2001-11-06
公開日2002-01-23
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure and functional analysis of the cysteine-rich C1 domain of kinase suppressor of Ras (KSR).
J.Mol.Biol., 315, 2002
1K7F
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CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE COMPLEXED WITH N-[1H-INDOL-3-YL-ACETYL]VALINE ACID
分子名称: N-[1H-INDOL-3-YL-ACETYL]VALINE ACID, PYRIDOXAL-5'-PHOSPHATE, TRYPTOPHAN SYNTHASE ALPHA CHAIN, ...
著者Weyand, M, Schlichting, I, Marabotti, A, Mozzarelli, A.
登録日2001-10-19
公開日2002-07-10
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of a new class of allosteric effectors complexed to tryptophan synthase.
J.Biol.Chem., 277, 2002
3CLY
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Crystal Structure of FGF Receptor 2 (FGFR2) Kinase Domains Trapped in Trans-Phosphorylation Reaction
分子名称: Fibroblast growth factor receptor 2, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
著者Chen, H, Mohammadi, M.
登録日2008-03-20
公開日2009-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A crystallographic snapshot of tyrosine trans-phosphorylation in action
Proc.Natl.Acad.Sci.USA, 105, 2008
1K8R
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Crystal structure of Ras-Bry2RBD complex
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Protein kinase byr2, ...
著者Scheffzek, K, Gruenewald, P, Wohlgemuth, S, Kabsch, W, Tu, H, Wigler, M, Wittinghofer, A, Herrmann, C.
登録日2001-10-25
公開日2002-03-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The Ras-Byr2RBD complex: structural basis for Ras effector recognition in yeast.
Structure, 9, 2001
4ZYE
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Crystal structure of Sulfolobus solfataricus O6-methylguanine methyltransferase
分子名称: GLYCEROL, Methylated-DNA--protein-cysteine methyltransferase, NITRATE ION
著者Miggiano, R, Rossi, F, Rizzi, M.
登録日2015-05-21
公開日2015-08-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure-function relationships governing activity and stability of a DNA alkylation damage repair thermostable protein.
Nucleic Acids Res., 43, 2015
1K8X
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Crystal Structure Of AlphaT183V Mutant Of Tryptophan Synthase From Salmonella Typhimurium
分子名称: PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, TRYPTOPHAN SYNTHASE, ...
著者Kulik, V, Weyand, M, Siedel, R, Niks, D, Arac, D, Dunn, M.F, Schlichting, I.
登録日2001-10-26
公開日2002-12-18
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献On the Role of AlphaThr183 in the Allosteric Regulation and Catalytic Mechanism of Tryptophan Synthase
J.Mol.Biol., 324, 2002
4K7M
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Crystal structure of RNase S variant (K7C/Q11C) with bound mercury ions
分子名称: MERCURY (II) ION, Ribonuclease pancreatic, SULFATE ION
著者Genz, M, Straeter, N.
登録日2013-04-17
公開日2013-11-27
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Apo- and Metalated Thiolate containing RNase S as Structural Basis for the Design of Artificial Metalloenzymes by Peptide- Protein Complementation
Z.Anorg.Allg.Chem., 639, 2013
1K3U
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CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE COMPLEXED WITH N-[1H-INDOL-3-YL-ACETYL]ASPARTIC ACID
分子名称: N-[1H-INDOL-3-YL-ACETYL]ASPARTIC ACID, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
著者Weyand, M, Schlichting, I, Marabotti, A, Mozzarelli, A.
登録日2001-10-04
公開日2002-07-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of a new class of allosteric effectors complexed to tryptophan synthase.
J.Biol.Chem., 277, 2002
4O93
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Crystal structure of Thermus thermophilis transhydrogeanse domain II dimer
分子名称: MERCURY (II) ION, NAD(P) transhydrogenase subunit alpha 2, NAD(P) transhydrogenase subunit beta
著者Leung, J.H, Yamaguchi, M, Moeller, A, Schurig-Briccio, L.A, Gennis, R.B, Potter, C.S, Carragher, B, Stout, C.D.
登録日2013-12-31
公開日2014-12-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structural biology. Division of labor in transhydrogenase by alternating proton translocation and hydride transfer.
Science, 347, 2015
1K9A
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Crystal structure analysis of full-length carboxyl-terminal Src kinase at 2.5 A resolution
分子名称: Carboxyl-terminal Src kinase
著者Ogawa, A, Takayama, Y, Nagata, A, Chong, K.T, Takeuchi, S, Sakai, H, Nakagawa, A, Nada, S, Okada, M, Tsukihara, T.
登録日2001-10-28
公開日2002-03-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the carboxyl-terminal Src kinase, Csk.
J.Biol.Chem., 277, 2002
4KA4
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Crystal structure of a proteolytically defined Zbeta domain of human DAI (ZBP1, DLM-1)
分子名称: DNA (5'-D(*TP*CP*GP*CP*GP*CP*G)-3'), Z-DNA-binding protein 1
著者Athanasiadis, A, de Rosa, M, De Sanctis, D.
登録日2013-04-22
公開日2013-05-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of a proteolytically defined Zbeta domain of human DAI (ZBP1, DLM-1)
To be Published
4KAC
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X-Ray Structure of the complex HaloTag2 with HALTS. Northeast Structural Genomics Consortium (NESG) Target OR150.
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, AMMONIUM ION, Haloalkane dehalogenase, ...
著者Kuzin, A, Lew, S, Neklesa, T.K, Noblin, D, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Wang, H, Everett, J.K, Acton, T.B, Kornhaber, G, Montelione, G.T, Crews, C.M, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2013-04-22
公開日2013-06-05
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.223 Å)
主引用文献Northeast Structural Genomics Consortium Target OR150
To be Published
4O9I
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Structure of CHD4 double chromodomains depicts cooperative folding for DNA binding
分子名称: Chromodomain-helicase-DNA-binding protein 4
著者Wiggs, K.R, Chruszcz, M, Su, X, Minor, W, Khorasanizadeh, S.
登録日2014-01-02
公開日2015-07-08
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of CHD4 double chromodomains depicts cooperative folding for DNA binding
TO BE PUBLISHED
6G9W
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Crystal Structure of Aspergillus fumigatus UDP-N-acetylglucosamine pyrophosphorylase in complex with UTP
分子名称: UDP-N-acetylglucosamine pyrophosphorylase, URIDINE 5'-TRIPHOSPHATE
著者Raimi, O.G, Hurtado-Guerrero, R, Borodin, V, Urbaniak, M, Ferguson, M, van Aalten, D.
登録日2018-04-11
公開日2019-04-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A mechanism-inspired UDP-N-acetylglucosamine pyrophosphorylase inhibitor
RSC Chem. Biol., 2020
3RC8
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Human Mitochondrial Helicase Suv3 in Complex with Short RNA Fragment
分子名称: ATP-dependent RNA helicase SUPV3L1, mitochondrial, RNA fragment
著者Dauter, Z, Jedrzejczak, R, Dauter, M, Wang, J, Szczesny, R, Stepien, P.
登録日2011-03-30
公開日2011-05-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Human Suv3 protein reveals unique features among SF2 helicases.
Acta Crystallogr.,Sect.D, 67, 2011
6THV
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X-ray structure of the Danio rerio histone deacetylase 6 (HDAC6; catalytic domain 2) in complex with Tubastatin A
分子名称: 1,2-ETHANEDIOL, 4-[(2-methyl-3,4-dihydro-1~{H}-pyrido[4,3-b]indol-5-yl)methyl]-~{N}-oxidanyl-benzamide, DI(HYDROXYETHYL)ETHER, ...
著者Barinka, C, Motlova, L, Svoboda, M.
登録日2019-11-21
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural and in Vivo Characterization of Tubastatin A, a Widely Used Histone Deacetylase 6 Inhibitor.
Acs Med.Chem.Lett., 11, 2020
4OIX
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Crystal structure of truncated Acylphosphatase from S. sulfataricus
分子名称: Acylphosphatase
著者Dilovic, I, Bolognesi, M, Ricagno, S.
登録日2014-01-20
公開日2014-02-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of truncated Acylphosphatase from S. sulfataricus
TO BE PUBLISHED

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件を2024-10-09に公開中

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