Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51689 件

8CER
DownloadVisualize
BU of 8cer by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with inhibitor TO494
分子名称: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-naphthalen-1-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
著者Klima, M, Silhan, J, Boura, E.
登録日2023-02-02
公開日2023-04-05
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
5ELG
DownloadVisualize
BU of 5elg by Molmil
The structure of DHAR1 from Arabidopsis thaliana
分子名称: GLUTATHIONE, GLYCEROL, Glutathione S-transferase DHAR1, ...
著者Menault, M, Roszak, A.W, Lapthorn, A.J.
登録日2015-11-04
公開日2016-11-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Arabidopsis thaliana DHAR1 apo structure
To Be Published
8CEQ
DownloadVisualize
BU of 8ceq by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with inhibitor TO427
分子名称: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-phenylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
著者Klima, M, Silhan, J, Boura, E.
登録日2023-02-02
公開日2023-04-05
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
5ELK
DownloadVisualize
BU of 5elk by Molmil
Crystal structure of mouse Unkempt zinc fingers 4-6 (ZnF4-6), bound to RNA
分子名称: RING finger protein unkempt homolog, RNA, ZINC ION
著者Teplova, M, Murn, J, Zarnack, K, Shi, Y, Patel, D.J.
登録日2015-11-04
公開日2015-12-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Recognition of distinct RNA motifs by the clustered CCCH zinc fingers of neuronal protein Unkempt.
Nat.Struct.Mol.Biol., 23, 2016
8CES
DownloadVisualize
BU of 8ces by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with inhibitor TO500
分子名称: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-[4-azanyl-5-[2-(1~{H}-benzimidazol-2-yl)ethynyl]pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
著者Klima, M, Silhan, J, Boura, E.
登録日2023-02-02
公開日2023-04-05
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
8CET
DownloadVisualize
BU of 8cet by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with inhibitor TO507
分子名称: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-quinolin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
著者Klima, M, Silhan, J, Boura, E.
登録日2023-02-02
公開日2023-04-05
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
5ERM
DownloadVisualize
BU of 5erm by Molmil
Crystal structure of cyclization domain of Phomopsis amygdali fusicoccadiene synthase complexed with magnesium ions and pamidronate
分子名称: CHLORIDE ION, Fusicoccadiene synthase, MAGNESIUM ION, ...
著者Chen, M, Christianson, D.W.
登録日2015-11-14
公開日2016-01-20
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Structure and Function of Fusicoccadiene Synthase, a Hexameric Bifunctional Diterpene Synthase.
Acs Chem.Biol., 11, 2016
7PZD
DownloadVisualize
BU of 7pzd by Molmil
Cryo-EM structure of the NLRP3 PYD filament
分子名称: NACHT, LRR and PYD domains-containing protein 3
著者Hochheiser, I.V, Hagelueken, G, Behrmann, H, Behrmann, E, Geyer, M.
登録日2021-10-12
公開日2022-04-20
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Directionality of PYD filament growth determined by the transition of NLRP3 nucleation seeds to ASC elongation.
Sci Adv, 8, 2022
5I6E
DownloadVisualize
BU of 5i6e by Molmil
Crystal structure of the central domain of yeast acetyl-CoA carboxylase
分子名称: Acetyl-CoA carboxylase, MALONATE ION
著者Hunkeler, M, Stuttfeld, E, Hagmann, A, Imseng, S, Maier, T.
登録日2016-02-16
公開日2016-04-20
最終更新日2016-04-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The dynamic organization of fungal acetyl-CoA carboxylase.
Nat Commun, 7, 2016
7Q35
DownloadVisualize
BU of 7q35 by Molmil
Crystal structure of the mutant bacteriorhodopsin pressurized with krypton
分子名称: Bacteriorhodopsin, EICOSANE, HEXANE, ...
著者Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A.
登録日2021-10-27
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action.
Commun Biol, 5, 2022
7Q36
DownloadVisualize
BU of 7q36 by Molmil
Crystal structure of KR2 sodium pump rhodopsin pressurized with krypton
分子名称: EICOSANE, HEXANE, KRYPTON, ...
著者Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A.
登録日2021-10-27
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action.
Commun Biol, 5, 2022
7PXY
DownloadVisualize
BU of 7pxy by Molmil
Crystal structure of Arabidopsis thaliana 5-enol-pyruvyl-shikimate-3-phosphate synthase (EPSPS) in open conformation
分子名称: 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic, CHLORIDE ION, ...
著者Ruszkowski, M.
登録日2021-10-08
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Deciphering the structure of Arabidopsis thaliana 5- enol -pyruvyl-shikimate-3-phosphate synthase: An essential step toward the discovery of novel inhibitors to supersede glyphosate.
Comput Struct Biotechnol J, 20, 2022
7Q37
DownloadVisualize
BU of 7q37 by Molmil
Crystal structure of proton pump MAR rhodopsin pressurized with krypton
分子名称: Bacteriorhodopsin, EICOSANE, HEXANE, ...
著者Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A.
登録日2021-10-27
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action.
Commun Biol, 5, 2022
7Q38
DownloadVisualize
BU of 7q38 by Molmil
Crystal structure of the mutant bacteriorhodopsin pressurized with argon
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ARGON, Bacteriorhodopsin, ...
著者Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A.
登録日2021-10-27
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action.
Commun Biol, 5, 2022
1AG6
DownloadVisualize
BU of 1ag6 by Molmil
PLASTOCYANIN FROM SPINACH
分子名称: COPPER (II) ION, PLASTOCYANIN
著者Xue, Y, Okvist, M, Young, S.
登録日1997-04-02
公開日1998-10-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of spinach plastocyanin at 1.7 A resolution.
Protein Sci., 7, 1998
5EO8
DownloadVisualize
BU of 5eo8 by Molmil
Crystal structure of AOL(868)
分子名称: Predicted protein, methyl 1-seleno-beta-L-fucopyranoside
著者Kato, R, Kiso, M, Ishida, H, Ando, H, Suzuki, T, Shimabukuro, S, Makyio, H.
登録日2015-11-10
公開日2016-06-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Six independent fucose-binding sites in the crystal structure of Aspergillus oryzae lectin
Biochem.Biophys.Res.Commun., 477, 2016
3LNL
DownloadVisualize
BU of 3lnl by Molmil
Crystal structure of Staphylococcus aureus protein SA1388
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, UPF0135 protein SA1388, ZINC ION
著者Singh, K.S, Chruszcz, M, Zhang, X, Minor, W, Zhang, H.
登録日2010-02-02
公開日2010-03-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a Conserved Hypothetical Protein Sa1388 from S. aureus Reveals a Capped Hexameric Toroid with Two Pii Domain Lids and a Dinuclear Metal Center.
Bmc Struct.Biol., 6, 2006
5EM0
DownloadVisualize
BU of 5em0 by Molmil
Crystal structure of mugwort allergen Art v 4
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Pollen allergen Art v 4.01, SODIUM ION
著者Offermann, L.R, Perdue, M.L, Chruszcz, M.
登録日2015-11-05
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural, Functional, and Immunological Characterization of Profilin Panallergens Amb a 8, Art v 4, and Bet v 2.
J.Biol.Chem., 291, 2016
1IRG
DownloadVisualize
BU of 1irg by Molmil
INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, 20 STRUCTURES
分子名称: INTERFERON REGULATORY FACTOR-2
著者Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y.
登録日1997-11-25
公開日1998-03-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family.
Structure, 6, 1998
1J7Y
DownloadVisualize
BU of 1j7y by Molmil
Crystal structure of partially ligated mutant of HbA
分子名称: CARBON MONOXIDE, Hemoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Miele, A.E, Draghi, F, Arcovito, A, Bellelli, A, Brunori, M, Travaglini-Allocatelli, C, Vallone, B.
登録日2001-05-19
公開日2002-02-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Control of heme reactivity by diffusion: structural basis and functional characterization in hemoglobin mutants.
Biochemistry, 40, 2001
8C0E
DownloadVisualize
BU of 8c0e by Molmil
The lipid linked oligosaccharide polymerase Wzy and its regulating co-polymerase Wzz form a complex in vivo and in vitro
分子名称: ECA polysaccharide chain length modulation protein
著者Weckener, M, Woodward, L.S, Clarke, B.R, Liu, H, Ward, P.N, Le Bas, A, Bhella, D, Whitfield, C, Naismith, J.H.
登録日2022-12-16
公開日2023-04-19
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献The lipid linked oligosaccharide polymerase Wzy and its regulating co-polymerase, Wzz, from enterobacterial common antigen biosynthesis form a complex.
Open Biology, 13, 2023
7PGX
DownloadVisualize
BU of 7pgx by Molmil
Structure of dark-adapted AsLOV2 wild type
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Gelfert, R, Weyand, M, Moeglich, A.
登録日2021-08-16
公開日2022-05-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.001 Å)
主引用文献Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine.
Nat Commun, 13, 2022
5I36
DownloadVisualize
BU of 5i36 by Molmil
Crystal structure of color device state A
分子名称: DNA (26-MER), DNA (5'-D(*AP*CP*AP*GP*TP*CP*GP*TP*GP*GP*TP*AP*TP*C)-3'), DNA (5'-D(*CP*AP*GP*AP*TP*AP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*TP*AP*CP*G)-3'), ...
著者Hao, Y, Kristiansen, M, Sha, R, Birktoft, J, Mao, C, Seeman, N.C.
登録日2016-02-09
公開日2017-01-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (5.123 Å)
主引用文献A device that operates within a self-assembled 3D DNA crystal.
Nat Chem, 9, 2017
1ITW
DownloadVisualize
BU of 1itw by Molmil
Crystal structure of the monomeric isocitrate dehydrogenase in complex with isocitrate and Mn
分子名称: ISOCITRIC ACID, Isocitrate dehydrogenase, MANGANESE (II) ION
著者Yasutake, Y, Watanabe, S, Yao, M, Takada, Y, Fukunaga, N, Tanaka, I.
登録日2002-02-12
公開日2002-12-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of the Monomeric Isocitrate Dehydrogenase: Evidence of a Protein Monomerization by a Domain Duplication
Structure, 10, 2002
5EQ9
DownloadVisualize
BU of 5eq9 by Molmil
Crystal structure of Medicago truncatula Histidinol-Phosphate Phosphatase (MtHPP) in complex with L-histidinol phosphate and Mg2+
分子名称: GLYCEROL, Inositol monophosphatase, MAGNESIUM ION, ...
著者Ruszkowski, M, Dauter, Z.
登録日2015-11-12
公開日2016-03-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Structural Studies of Medicago truncatula Histidinol Phosphate Phosphatase from Inositol Monophosphatase Superfamily Reveal Details of Penultimate Step of Histidine Biosynthesis in Plants.
J.Biol.Chem., 291, 2016

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon