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PDB: 200 results

7QXP
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BU of 7qxp by Molmil
Proteasome-ZFAND5 Complex Z+B state
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-26
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QXX
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BU of 7qxx by Molmil
Proteasome-ZFAND5 Complex Z+E state
Descriptor: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QXU
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BU of 7qxu by Molmil
Proteasome-ZFAND5 Complex Z+C state
Descriptor: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QY7
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BU of 7qy7 by Molmil
Proteasome-ZFAND5 Complex Z-A state
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QXW
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BU of 7qxw by Molmil
Proteasome-ZFAND5 Complex Z+D state
Descriptor: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QYA
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BU of 7qya by Molmil
Proteasome-ZFAND5 Complex Z-B state
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QYB
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BU of 7qyb by Molmil
Proteasome-ZFAND5 Complex Z-C state
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
1U1Z
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BU of 1u1z by Molmil
The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)
Descriptor: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, SULFATE ION
Authors:Kimber, M.S, Martin, F, Lu, Y, Houston, S, Vedadi, M, Dharamsi, A, Fiebig, K.M, Schmid, M, Rock, C.O.
Deposit date:2004-07-16
Release date:2004-09-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Structure of (3R)-hydroxyacyl-acyl carrier protein dehydratase (FabZ) from Pseudomonas aeruginosa
J.Biol.Chem., 279, 2004
5HAV
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BU of 5hav by Molmil
Sperm whale myoglobin mutant L29H F33Y F43H (F33Y CuBMb) with oxygen bound
Descriptor: Myoglobin, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Petrik, I.D, Lu, Y.
Deposit date:2015-12-31
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.268 Å)
Cite:Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin.
J.Am.Chem.Soc., 138, 2016
7YQM
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BU of 7yqm by Molmil
2.9-angstrom cryo-EM structure of Ecoli malate synthase G
Descriptor: Malate synthase G
Authors:Wu, K.-P, Wu, Y.-M, Lu, Y.-C.
Deposit date:2022-08-08
Release date:2023-03-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Cryo-EM reveals the structure and dynamics of a 723-residue malate synthase G.
J.Struct.Biol., 215, 2023
4QLW
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BU of 4qlw by Molmil
Azurin mutant M121E with iron
Descriptor: Azurin, FE (III) ION, NITRATE ION, ...
Authors:Liu, J, Robinson, H, Lu, Y.
Deposit date:2014-06-13
Release date:2014-08-13
Last modified:2014-10-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Redesigning the Blue Copper Azurin into a Redox-Active Mononuclear Nonheme Iron Protein: Preparation and Study of Fe(II)-M121E Azurin.
J.Am.Chem.Soc., 136, 2014
4QKT
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BU of 4qkt by Molmil
Azurin mutant M121EM44K with copper
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, Azurin, ...
Authors:Liu, J, Robinson, H, Lu, Y.
Deposit date:2014-06-09
Release date:2014-08-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Redesigning the Blue Copper Azurin into a Redox-Active Mononuclear Nonheme Iron Protein: Preparation and Study of Fe(II)-M121E Azurin.
J.Am.Chem.Soc., 136, 2014
4AUA
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BU of 4aua by Molmil
Liganded X-ray crystal structure of cyclin dependent kinase 6 (CDK6)
Descriptor: 1H-benzimidazol-2-yl(1H-pyrrol-2-yl)methanone, CYCLIN-DEPENDENT KINASE 6
Authors:Cho, Y.S, Angove, H, Brain, C, Chen, C.H.T, Cheng, R, Chopra, R, Chung, K, Congreve, M, Dagostin, C, Davis, D, Feltell, R, Giraldes, J, Hiscock, S, Kim, S, Kovats, S, Lagu, B, Lewry, K, Loo, A, Lu, Y, Luzzio, M, Maniara, W, Mcmenamin, R, Mortenson, P, Benning, R, O'Reilly, M, Rees, D, Shen, J, Smith, T, Wang, Y, Williams, G, Woolford, A, Wrona, W, Xu, M, Yang, F, Howard, S.
Deposit date:2012-05-15
Release date:2013-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Fragment-Based Discovery of 7-Azabenzimidazoles as Potent, Highly Selective, and Orally Active CDK4/6 Inhibitors.
ACS Med Chem Lett, 3, 2012
8U8P
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BU of 8u8p by Molmil
S292F Streptomyces coelicolor Laccase
Descriptor: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
Authors:Wang, J.-X, Lu, Y.
Deposit date:2023-09-18
Release date:2023-11-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8Q
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BU of 8u8q by Molmil
V290N/S292F Streptomyces coelicolor Laccase
Descriptor: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
Authors:Wang, J.-X, Lu, Y.
Deposit date:2023-09-18
Release date:2023-11-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8T
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BU of 8u8t by Molmil
Y229F/V290N Streptomyces coelicolor Laccase
Descriptor: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
Authors:Wang, J.-X, Lu, Y.
Deposit date:2023-09-18
Release date:2023-11-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8R
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BU of 8u8r by Molmil
Y229F/V290N/S292F Streptomyces coelicolor Laccase
Descriptor: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
Authors:Wang, J.-X, Lu, Y.
Deposit date:2023-09-18
Release date:2023-11-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
8U8S
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BU of 8u8s by Molmil
Y229F/S292F Streptomyces coelicolor Laccase
Descriptor: BORIC ACID, COPPER (II) ION, Copper oxidase, ...
Authors:Wang, J.-X, Lu, Y.
Deposit date:2023-09-18
Release date:2023-11-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.
Angew.Chem.Int.Ed.Engl., 62, 2023
7YQN
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BU of 7yqn by Molmil
Crystal structure of Ecoli malate synthase G
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, GLYCEROL, ...
Authors:Wu, K.-P, Lu, Y.-C, Ko, T.-P.
Deposit date:2022-08-08
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cryo-EM reveals the structure and dynamics of a 723-residue malate synthase G.
J.Struct.Biol., 215, 2023
2B3G
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BU of 2b3g by Molmil
p53N (fragment 33-60) bound to RPA70N
Descriptor: Cellular tumor antigen p53, Replication protein A 70 kDa DNA-binding subunit
Authors:Bochkareva, E, Kaustov, L, Ayed, A, Yi, G.S, Lu, Y, Pineda-Lucena, A, Liao, J.C, Okorokov, A.L, Milner, J, Arrowsmith, C.H, Bochkarev, A.
Deposit date:2005-09-20
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Single-stranded DNA mimicry in the p53 transactivation domain interaction with replication protein A.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1CC3
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BU of 1cc3 by Molmil
PURPLE CUA CENTER
Descriptor: COPPER (II) ION, PROTEIN (CUA AZURIN)
Authors:Robinson, H, Ang, M.C, Gao, Y.-G, Hay, M.T, Lu, Y, Wang, A.H.-J.
Deposit date:1999-03-03
Release date:1999-12-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis of electron transfer modulation in the purple CuA center.
Biochemistry, 38, 1999
4MFH
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BU of 4mfh by Molmil
Crystal Structure of M121G Azurin
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Azurin, COPPER (II) ION
Authors:Tian, S, Lu, Y.
Deposit date:2013-08-27
Release date:2014-01-15
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Copper-sulfenate complex from oxidation of a cavity mutant of Pseudomonas aeruginosa azurin.
Proc.Natl.Acad.Sci.USA, 111, 2014
1LUF
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BU of 1luf by Molmil
Crystal Structure of the MuSK Tyrosine Kinase: Insights into Receptor Autoregulation
Descriptor: muscle-specific tyrosine kinase receptor musk
Authors:Till, J.H, Becerra, M, Watty, A, Lu, Y, Ma, Y, Neubert, T.A, Burden, S.J, Hubbard, S.R.
Deposit date:2002-05-22
Release date:2002-09-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of the MuSK tyrosine kinase: insights into receptor autoregulation.
Structure, 10, 2002
8X7T
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BU of 8x7t by Molmil
MCM in the Apo state.
Descriptor: mini-chromosome maintenance complex 3
Authors:Ma, J, Yi, G, Ye, M, MacGregor-Chatwin, C, Sheng, Y, Lu, Y, Li, M, Gilbert, R.J.C, Zhang, P.
Deposit date:2023-11-25
Release date:2024-01-17
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:MCM in the Apo state
To Be Published
8X7U
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BU of 8x7u by Molmil
MCM in complex with dsDNA in presence of ATP.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, mini-chromosome maintenance complex 3
Authors:Ma, J, Yi, G, Ye, M, MacGregor-Chatwin, C, Sheng, Y, Lu, Y, Li, M, Gilbert, R.J.C, Zhang, P.
Deposit date:2023-11-25
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:MCM in complex with dsDNA in presence of ATP
To Be Published

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