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PDB: 244 results

2Z70
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BU of 2z70 by Molmil
E.coli RNase 1 in complex with d(CGCGATCGCG)
Descriptor: CALCIUM ION, DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DTP*DCP*DGP*DCP*DG)-3'), Ribonuclease I
Authors:Martinez-Rodriguez, S, Loris, R, Messens, J.
Deposit date:2007-08-09
Release date:2008-06-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Nonspecific base recognition mediated by water bridges and hydrophobic stacking in ribonuclease I from Escherichia coli
Protein Sci., 17, 2008
7NKV
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BU of 7nkv by Molmil
PaaR2 regulator N-terminal domain
Descriptor: Phage repressor protein CI
Authors:Prolic-Kalinsek, M, Loris, R, Volkov, A.N.
Deposit date:2021-02-19
Release date:2022-03-02
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Regulation of the Escherichia coli paaR2-paaA2-ParD2 toxin-antitoxin system
To Be Published
2AR6
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BU of 2ar6 by Molmil
Pterocarpus angolensis Lectin (PAL) In Complex With The Pentasaccharide M592
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose, CALCIUM ION, ...
Authors:Buts, L, Garcia-Pino, A, Imberty, A, Amiot, N, Boons, G.J, Beeckmans, S, Versees, W, Wyns, L, Loris, R.
Deposit date:2005-08-19
Release date:2006-08-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin.
Febs J., 273, 2006
2ARE
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BU of 2are by Molmil
Pterocarpus angolensis Lectin (PAL) In Complex With D-Mannose (anomeric mixture)
Descriptor: CALCIUM ION, MANGANESE (II) ION, alpha-D-mannopyranose, ...
Authors:Buts, L, Garcia-Pino, A, Imberty, A, Amiot, N, Boons, G.-J, Versees, W, Lah, J, Beeckmans, S, Wyns, L, Loris, R.
Deposit date:2005-08-19
Release date:2006-08-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin.
Febs J., 273, 2006
6Z1C
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BU of 6z1c by Molmil
Crystal structure of Arabidopsis thaliana CK2-alpha-1 in complex with TTP-22
Descriptor: 3-[5-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]sulfanylpropanoic acid, CHLORIDE ION, Casein kinase II subunit alpha-1
Authors:Demulder, M, Loris, R, De Veylder, L.
Deposit date:2020-05-13
Release date:2021-03-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Arabidopsis casein kinase 2 triggers stem cell exhaustion under Al toxicity and phosphate deficiency through activating the DNA damage response pathway.
Plant Cell, 33, 2021
2PHF
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BU of 2phf by Molmil
Pterocarpus angolensis lectin complexed with Man-6
Descriptor: CALCIUM ION, Lectin, MANGANESE (II) ION, ...
Authors:Garcia-Pino, A, Buts, L, Wyns, L, Imberty, A, Loris, R.
Deposit date:2007-04-11
Release date:2007-07-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:How a plant lectin recognizes high mannose oligosaccharides
Plant Physiol., 144, 2007
2PHX
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BU of 2phx by Molmil
Pterocarpus angolensis lectin (PAL) in complex with Man-5
Descriptor: CALCIUM ION, Lectin, MANGANESE (II) ION, ...
Authors:Garcia-Pino, A, Buts, L, Wyns, L, Imberty, A, Loris, R.
Deposit date:2007-04-12
Release date:2007-07-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:How a plant lectin recognizes high mannose oligosaccharides
Plant Physiol., 144, 2007
7R5A
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BU of 7r5a by Molmil
Vibrio cholera ParD2:ParE2 antitoxin:toxin complex
Descriptor: Antitoxin ParD, Toxin
Authors:Garcia-Rodriguez, G, Loris, R.
Deposit date:2022-02-10
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Toxin:antitoxin ratio sensing autoregulation of the Vibrio cholerae parDE2 module.
Sci Adv, 10, 2024
1QDO
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BU of 1qdo by Molmil
MAN(APLHA1-3)MAN(ALPHA1-O)METHYL CONCANAVALIN A COMPLEX
Descriptor: CALCIUM ION, MANGANESE (II) ION, PROTEIN (CONCANAVALIN A), ...
Authors:Bouckaert, J, Loris, R, Wyns, L.
Deposit date:1999-05-24
Release date:1999-10-14
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structures of Man(alpha1-3)Man(alpha1-O)Me and Man(alpha1-6)Man(alpha1-O)Me in complex with concanavalin A.
J.Biol.Chem., 274, 1999
3TCJ
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BU of 3tcj by Molmil
CcdB dimer from V. fisheri in complex with one C-terminal domain of F-plasmid CcdA
Descriptor: ACETATE ION, CcdB, Protein CcdA
Authors:De Jonge, N, Loris, R.
Deposit date:2011-08-09
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Energetic basis of uncoupling folding from binding for an intrinsically disordered protein.
J.Am.Chem.Soc., 135, 2013
4MZP
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BU of 4mzp by Molmil
MazF from S. aureus crystal form III, C2221, 2.7 A
Descriptor: MazF mRNA interferase
Authors:Zorzini, V, Loris, R, van Nuland, N.A.J, Cheung, A.
Deposit date:2013-09-30
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Structural and biophysical characterization of Staphylococcus aureus SaMazF shows conservation of functional dynamics.
Nucleic Acids Res., 42, 2014
4MZT
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BU of 4mzt by Molmil
MazF from S. aureus crystal form II, C2221, 2.3 A
Descriptor: MazF mRNA interferase
Authors:Zorzini, V, Loris, R, van Nuland, N.A.J, Cheung, A.
Deposit date:2013-09-30
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Structural and biophysical characterization of Staphylococcus aureus SaMazF shows conservation of functional dynamics.
Nucleic Acids Res., 42, 2014
8A0X
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BU of 8a0x by Molmil
Crystal structure of the HigB2-HigA2 tetramer in complex with operator DNA
Descriptor: Antitoxin HigA-2, DNA (30-MER), DNA (31-MER), ...
Authors:Hadzi, S, Loris, R.
Deposit date:2022-05-30
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.296 Å)
Cite:Fuzzy DNA recognition by a prokaryotic transcription factor
To Be Published
8A0W
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BU of 8a0w by Molmil
Crystal structure of the HigA2 antitoxin in complex with operator DNA
Descriptor: Antitoxin HigA-2, DNA (17-MER), PHOSPHATE ION
Authors:Hadzi, S, Loris, R.
Deposit date:2022-05-30
Release date:2023-05-03
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.334 Å)
Cite:Fuzzy recognition by the prokaryotic transcription factor HigA2 from Vibrio cholerae.
Nat Commun, 15, 2024
1QMO
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BU of 1qmo by Molmil
Structure of FRIL, a legume lectin that delays hematopoietic progenitor maturation
Descriptor: CALCIUM ION, MANGANESE (II) ION, MANNOSE BINDING LECTIN, ...
Authors:Hamelryck, T.W, Moore, J.G, Chrispeels, M, Loris, R, Wyns, L.
Deposit date:1999-10-04
Release date:1999-10-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The Role of Weak Protein-Protein Interactions in Multivalent Lectin-Carbohydrate Binding: Crystal Structure of Cross-Linked Fril
J.Mol.Biol., 299, 2000
6F8S
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BU of 6f8s by Molmil
Toxin-Antitoxin complex GraTA
Descriptor: DI(HYDROXYETHYL)ETHER, Putative Killer protein, SULFATE ION, ...
Authors:Talavera, A, Loris, R.
Deposit date:2017-12-13
Release date:2018-07-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A dual role in regulation and toxicity for the disordered N-terminus of the toxin GraT.
Nat Commun, 10, 2019
6F8H
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BU of 6f8h by Molmil
antitoxin GraA
Descriptor: XRE family transcriptional regulator
Authors:Talavera, A, Loris, R.
Deposit date:2017-12-13
Release date:2019-01-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:A dual role in regulation and toxicity for the disordered N-terminus of the toxin GraT.
Nat Commun, 10, 2019
6FIX
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BU of 6fix by Molmil
antitoxin GraA in complex with its operator
Descriptor: DNA (30-MER), XRE family transcriptional regulator
Authors:Talavera, A, Loris, R.
Deposit date:2018-01-19
Release date:2019-01-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:A dual role in regulation and toxicity for the disordered N-terminus of the toxin GraT.
Nat Commun, 10, 2019
8OJE
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BU of 8oje by Molmil
Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 in complex with L-malate
Descriptor: (2S)-2-hydroxybutanedioic acid, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Haesaerts, S, Loris, R, Larsen, P.B.
Deposit date:2023-03-24
Release date:2023-05-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.142399 Å)
Cite:Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants
To Be Published
3M7H
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BU of 3m7h by Molmil
Crystal structure of the bacteriocin LLPA from Pseudomonas sp.
Descriptor: Putidacin L1
Authors:Garcia-Pino, A, Loris, R.
Deposit date:2010-03-16
Release date:2011-03-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Determinants for Activity and Specificity of the Bacterial Toxin LlpA
Plos Pathog., 9, 2013
8OJQ
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BU of 8ojq by Molmil
Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 T778 mutant with bound phosphate
Descriptor: PHOSPHATE ION, Phosphoenolpyruvate carboxylase 1
Authors:Haesaerts, S, Loris, R, Larsen, P.
Deposit date:2023-03-24
Release date:2024-04-03
Method:X-RAY DIFFRACTION (3.04938388 Å)
Cite:Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants
To Be Published
8OJ9
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BU of 8oj9 by Molmil
Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 free form
Descriptor: Phosphoenolpyruvate carboxylase 1
Authors:Haesaerts, S, Loris, R, Larsen, P.B.
Deposit date:2023-03-24
Release date:2023-04-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.246383 Å)
Cite:Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants
To Be Published
8OJF
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BU of 8ojf by Molmil
Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 with bound phosphate
Descriptor: CHLORIDE ION, PHOSPHATE ION, Phosphoenolpyruvate carboxylase 1
Authors:Haesaerts, S, Loris, R, Larsen, P.B.
Deposit date:2023-03-24
Release date:2023-05-31
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.03683758 Å)
Cite:Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants
To Be Published
5JA8
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BU of 5ja8 by Molmil
Crystal structure of the HigB2 toxin in complex with Nb2
Descriptor: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Hadzi, S, Loris, R.
Deposit date:2016-04-12
Release date:2017-04-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
8BT1
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BU of 8bt1 by Molmil
YdaT transcription regulator (CII functional analog)
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Prolic-Kalinsek, M, Loris, R.
Deposit date:2022-11-27
Release date:2023-02-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.39788437 Å)
Cite:Structural basis of DNA binding by YdaT, a functional equivalent of the CII repressor in the cryptic prophage CP-933P from Escherichia coli O157:H7.
Acta Crystallogr D Struct Biol, 79, 2023

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