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PDB: 38 results

3HZQ
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BU of 3hzq by Molmil
Structure of a tetrameric MscL in an expanded intermediate state
Descriptor: Large-conductance mechanosensitive channel
Authors:Liu, Z.F, Gandhi, C.S, Rees, D.C.
Deposit date:2009-06-24
Release date:2009-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.82 Å)
Cite:Structure of a tetrameric MscL in an expanded intermediate state.
Nature, 461, 2009
5WTR
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BU of 5wtr by Molmil
Crystal structure of a prokaryotic TRIC channel in 0.5 M KCl
Descriptor: 1,2-ETHANEDIOL, POTASSIUM ION, TRISTEAROYLGLYCEROL, ...
Authors:Ou, X.M, Wang, L.F, Yang, H.T, Liu, X.Y, Liu, Z.F.
Deposit date:2016-12-14
Release date:2017-04-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ion and water binding sites inside an occluded hourglass pore of a TRIC channel
BMC BIOL., 2017
3JCU
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BU of 3jcu by Molmil
Cryo-EM structure of spinach PSII-LHCII supercomplex at 3.2 Angstrom resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Wei, X.P, Zhang, X.Z, Su, X.D, Cao, P, Liu, X.Y, Li, M, Chang, W.R, Liu, Z.F.
Deposit date:2016-03-10
Release date:2016-05-25
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of spinach photosystem II-LHCII supercomplex at 3.2 A resolution
Nature, 534, 2016
7XZJ
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BU of 7xzj by Molmil
Cryo-EM structure of TOC complex from Chlamydomonas reinhardtii.
Descriptor: Ctap3, INOSITOL HEXAKISPHOSPHATE, Tic100, ...
Authors:Liu, H, Li, A.J, Liu, Z.F.
Deposit date:2022-06-02
Release date:2023-01-11
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Architecture of chloroplast TOC-TIC translocon supercomplex.
Nature, 615, 2023
7XZI
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BU of 7xzi by Molmil
Cryo-EM structure of TOC-TIC supercomplex from Chlamydomonas reinhardtii
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, Ctap3, ...
Authors:Liu, H, Li, A.J, Liu, Z.F.
Deposit date:2022-06-02
Release date:2023-01-11
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Architecture of chloroplast TOC-TIC translocon supercomplex.
Nature, 615, 2023
4YZH
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BU of 4yzh by Molmil
Structure of the Arabidopsis TAP38/PPH1 in complex with pLhcb1 phosphopeptide substrate
Descriptor: Chlorophyll a-b binding protein 2, chloroplastic, MANGANESE (II) ION, ...
Authors:Wei, X.P, Guo, J.T, Li, M, Liu, Z.F.
Deposit date:2015-03-25
Release date:2015-04-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Mechanism Underlying the Specific Recognition between the Arabidopsis State-Transition Phosphatase TAP38/PPH1 and Phosphorylated Light-Harvesting Complex Protein Lhcb1
Plant Cell, 27, 2015
4YZG
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BU of 4yzg by Molmil
Structure of the Arabidopsis TAP38/PPH1, a state-transition phosphatase responsible for dephosphorylation of LHCII
Descriptor: MANGANESE (II) ION, Protein phosphatase 2C 57, SULFATE ION
Authors:Wei, X.P, Guo, J.T, Li, M, Liu, Z.F.
Deposit date:2015-03-25
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Mechanism Underlying the Specific Recognition between the Arabidopsis State-Transition Phosphatase TAP38/PPH1 and Phosphorylated Light-Harvesting Complex Protein Lhcb1
Plant Cell, 27, 2015
5EGI
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BU of 5egi by Molmil
Structure of a Trimeric Intracellular Cation channel from C. elegans with bound Ca2+
Descriptor: CALCIUM ION, DECYL-BETA-D-MALTOPYRANOSIDE, Uncharacterized protein Y57A10A.10, ...
Authors:Yang, H.T, Hu, M.H, Liu, Z.F.
Deposit date:2015-10-27
Release date:2016-10-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Pore architecture of TRIC channels and insights into their gating mechanism.
Nature, 538, 2016
5EIK
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BU of 5eik by Molmil
Structure of a Trimeric Intracellular Cation channel from C. elegans in the absence of Ca2+
Descriptor: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ACETATE ION, DECYL-BETA-D-MALTOPYRANOSIDE, ...
Authors:Hu, M.H, Yang, H.T, Liu, Z.F.
Deposit date:2015-10-30
Release date:2016-10-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Pore architecture of TRIC channels and insights into their gating mechanism.
Nature, 538, 2016
6AE9
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BU of 6ae9 by Molmil
X-ray structure of the photosystem II phosphatase PBCP
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Liu, X.Y, Chai, J.C, Ou, X.M, Liu, Z.F.
Deposit date:2018-08-03
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural Insights into Substrate Selectivity, Catalytic Mechanism, and Redox Regulation of Rice Photosystem II Core Phosphatase.
Mol Plant, 12, 2019
7F3U
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BU of 7f3u by Molmil
Cryo-EM structure of human TMEM120A in the CoASH-free state
Descriptor: Transmembrane protein 120A
Authors:Rong, Y, Gao, Y.W, Song, D.F, Zhao, Y, Liu, Z.F.
Deposit date:2021-06-17
Release date:2021-06-30
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4 Å)
Cite:TMEM120A contains a specific coenzyme A-binding site and might not mediate poking- or stretch-induced channel activities in cells.
Elife, 10, 2021
7F3T
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BU of 7f3t by Molmil
Cryo-EM structure of human TMEM120A in the CoASH-bound state
Descriptor: COENZYME A, Transmembrane protein 120A
Authors:Song, D.F, Rong, Y, Liu, Z.F.
Deposit date:2021-06-17
Release date:2021-06-30
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:TMEM120A contains a specific coenzyme A-binding site and might not mediate poking- or stretch-induced channel activities in cells.
Elife, 10, 2021
5XNN
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BU of 5xnn by Molmil
Structure of M-LHCII and CP24 complexes in the stacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
7DRK
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BU of 7drk by Molmil
Crystal structure of phosphatidylglycerol phosphate synthase in complex with cytidine diphosphate-diacylglycerol
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1,4-BUTANEDIOL, 5'-O-[(R)-{[(S)-{(2R)-2,3-bis[(9E)-octadec-9-enoyloxy]propoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]cytidine, ...
Authors:Yang, B.W, Liu, Z.F.
Deposit date:2020-12-28
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:The phosphatidylglycerol phosphate synthase PgsA utilizes a trifurcated amphipathic cavity for catalysis at the membrane-cytosol interface.
Curr Res Struct Biol, 3, 2021
7DRJ
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BU of 7drj by Molmil
Crystal structure of phosphatidylglycerol phosphate synthase in complex with phosphatidylglycerol phosphate
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1,4-BUTANEDIOL, ACETIC ACID, ...
Authors:Yang, B.W, Liu, Z.F.
Deposit date:2020-12-28
Release date:2021-12-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The phosphatidylglycerol phosphate synthase PgsA utilizes a trifurcated amphipathic cavity for catalysis at the membrane-cytosol interface.
Curr Res Struct Biol, 3, 2021
5XNL
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BU of 5xnl by Molmil
Structure of stacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
5ZJI
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BU of 5zji by Molmil
Structure of photosystem I supercomplex with light-harvesting complexes I and II
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X.W, Ma, J, Su, X.D, Cao, P, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2018-03-20
Release date:2018-06-20
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the maize photosystem I supercomplex with light-harvesting complexes I and II.
Science, 360, 2018
5XNM
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BU of 5xnm by Molmil
Structure of unstacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2019-05-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
5XNO
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BU of 5xno by Molmil
Structure of M-LHCII and CP24 complexes in the unstacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
6IG4
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BU of 6ig4 by Molmil
Structure of mitochondrial CDP-DAG synthase Tam41, delta 74
Descriptor: PLATINUM (II) ION, Phosphatidate cytidylyltransferase, mitochondrial, ...
Authors:Jiao, H.Z, Yin, Y, Liu, Z.F.
Deposit date:2018-09-23
Release date:2019-07-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.261 Å)
Cite:Structures of the Mitochondrial CDP-DAG Synthase Tam41 Suggest a Potential Lipid Substrate Pathway from Membrane to the Active Site.
Structure, 27, 2019
6KAD
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BU of 6kad by Molmil
Cryo-EM structure of the C2S2M2L2-type PSII-LHCII supercomplex from Chlamydomonas reihardtii
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Sheng, X, Watanabe, A, Li, A.J, Kim, E, Song, C, Murata, K, Song, D.F, Minagawa, J, Liu, Z.F.
Deposit date:2019-06-21
Release date:2019-10-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insight into light harvesting for photosystem II in green algae.
Nat.Plants, 5, 2019
6KIF
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BU of 6kif by Molmil
Structure of cyanobacterial photosystem I-IsiA-flavodoxin supercomplex
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Cao, P, Cao, D.F, Si, L, Su, X.D, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2019-07-18
Release date:2020-02-12
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for energy and electron transfer of the photosystem I-IsiA-flavodoxin supercomplex.
Nat.Plants, 6, 2020
6KVL
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BU of 6kvl by Molmil
Crystal structure of UDP-RebB-SrUGT76G1
Descriptor: (8alpha,9beta,10alpha,13alpha)-13-{[beta-D-glucopyranosyl-(1->2)-[beta-D-glucopyranosyl-(1->3)]-beta-D-glucopyranosyl]oxy}kaur-16-en-18-oic acid, UDP-glycosyltransferase 76G1, URIDINE-5'-DIPHOSPHATE
Authors:Li, J.X, Liu, Z.F, Wang, Y, Zhang, P.
Deposit date:2019-09-04
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Structural Insights into the Catalytic Mechanism of a Plant Diterpene Glycosyltransferase SrUGT76G1.
Plant Commun., 1, 2020
6KVI
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BU of 6kvi by Molmil
Crystal structure of UDP-SrUGT76G1
Descriptor: UDP-glycosyltransferase 76G1, URIDINE-5'-DIPHOSPHATE
Authors:Li, J.X, Liu, Z.F, Wang, Y, Zhang, P.
Deposit date:2019-09-04
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Structural Insights into the Catalytic Mechanism of a Plant Diterpene Glycosyltransferase SrUGT76G1.
Plant Commun., 1, 2020
6KVJ
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BU of 6kvj by Molmil
Crystal structure of UDPX-SrUGT76G1
Descriptor: UDP-glycosyltransferase 76G1, URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE
Authors:Li, J.X, Liu, Z.F, Wang, Y, Zhang, P.
Deposit date:2019-09-04
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Structural Insights into the Catalytic Mechanism of a Plant Diterpene Glycosyltransferase SrUGT76G1.
Plant Commun., 1, 2020

 

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