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PDB: 213 件

2YN7
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Crystal structure of an outer surface protein BBA66 from Borrelia burgdorferi
分子名称: OUTER SURFACE PROTEIN
著者Brangulis, K, Petrovskis, I, Kazaks, A, Ranka, R, Baumanis, V, Tars, K.
登録日2012-10-12
公開日2013-10-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of the Infectious Phenotype-Associated Outer Surface Protein Bba66 from the Lyme Disease Agent Borrelia Burgdorferi.
Ticks Tick Borne Dis., 5, 2014
4ALY
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Borrelia burgdorferi outer surface lipoprotein BBA64
分子名称: P35 ANTIGEN, SULFATE ION
著者Brangulis, K, Tars, K, Petrovskis, I, Kazaks, A, Ranka, R, Baumanis, V.
登録日2012-03-06
公開日2013-04-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of an Outer Surface Lipoprotein Bba64 from the Lyme Disease Agent Borrelia Burgdorferi which is Critical to Ensure Infection After a Tick Bite
Acta Crystallogr.,Sect.D, 69, 2013
4BOB
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Structure of Complement regulator-acquiring surface protein 3 (CRASP- 3, ErpP or BBN38) from Borrelia burgdorferi
分子名称: ERPP PROTEIN
著者Brangulis, K, Petrovskis, I, Baumanis, V, Tars, K.
登録日2013-05-18
公開日2014-06-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Crystal Structures of the Erp Protein Family Members Erpp and Erpc from Borrelia Burgdorferi Reveal the Reason for Different Affinities for Complement Regulator Factor H.
Biochim.Biophys.Acta, 1854, 2015
1ZX2
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Crystal Structure of Yeast UBP3-associated Protein BRE5
分子名称: UBP3-associated protein BRE5
著者Li, K, Zhao, K, Ossareh-Nazari, B, Da, G, Dargemont, C, Marmorstein, R.
登録日2005-06-06
公開日2005-06-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for interaction between the Ubp3 deubiquitinating enzyme and its Bre5 cofactor
J.Biol.Chem., 280, 2005
2QIY
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yeast Deubiquitinase Ubp3 and Bre5 cofactor complex
分子名称: UBP3-associated protein BRE5, Ubiquitin carboxyl-terminal hydrolase 3
著者Li, K, Liu, X, Marmorstein, R.
登録日2007-07-05
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Molecular basis for bre5 cofactor recognition by the ubp3 deubiquitylating enzyme.
J.Mol.Biol., 372, 2007
9EWM
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Mpro from SARS-CoV-2 with R4Q R298Q double mutations
分子名称: Non-structural protein 11
著者Plewka, J, Lis, K, Chykunova, Y, Czarna, A, Kantyka, T, Pyrc, K.
登録日2024-04-04
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EWN
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Mpro from SARS-CoV-2 with 4Q mutation
分子名称: Non-structural protein 11
著者Plewka, J, Lis, K, Czarna, A, Kantyka, T, Pyrc, K.
登録日2024-04-04
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.113 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EPL
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Mpro from SARS-CoV-2 with 298Q mutation
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Non-structural protein 11, ...
著者Plewka, J, Lis, K, Czarna, A, Pyrc, K, Kantyka, T, Chykunova, Y.
登録日2024-03-18
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EWO
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Mpro from SARS-CoV-2 with R4A R298A double mutations
分子名称: Non-structural protein 11, SULFATE ION
著者Plewka, J, Lis, K, Chykunova, Y, Czarna, A, Kantyka, T, Pyrc, K.
登録日2024-04-04
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EUS
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Mpro from SARS-CoV-2 with R298A mutation
分子名称: GLYCEROL, Replicase polyprotein 1a
著者Plewka, J, Lis, K, Czarna, A, Pyrc, K, Kantyka, T, Chykunova, Y.
登録日2024-03-28
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EUR
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Mpro WT from SARS-CoV-2 with 298Q mutation
分子名称: Replicase polyprotein 1a
著者Plewka, J, Lis, K, Czarna, A, Pyrc, K, Kantyka, T, Chykunova, Y.
登録日2024-03-28
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.113 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EPM
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BU of 9epm by Molmil
Mpro from SARS-CoV-2 with 4A mutation
分子名称: Non-structural protein 11
著者Plewka, J, Lis, K, Czarna, A, Pyrc, K, Kantyka, T, Chykunova, Y.
登録日2024-03-19
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.981 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
5DGJ
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1.0A resolution structure of Norovirus 3CL protease in complex an oxadiazole-based, cell permeable macrocyclic (20-mer) inhibitor
分子名称: 3C-LIKE PROTEASE, tert-butyl [(4S,7S,10S)-7-(cyclohexylmethyl)-10-(hydroxymethyl)-5,8,13-trioxo-22-oxa-6,9,14,20,21-pentaazabicyclo[17.2.1]docosa-1(21),19-dien-4-yl]carbamate
著者Lovell, S, Battaile, K.P, Mehzabeen, N, Damalanka, V.C, Kim, Y, Alliston, K.R, Weerawarna, P.M, Kankanamalage, A.C.G, Lushington, G.H, Chang, K.-O, Groutas, W.C.
登録日2015-08-27
公開日2016-02-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Oxadiazole-Based Cell Permeable Macrocyclic Transition State Inhibitors of Norovirus 3CL Protease.
J.Med.Chem., 59, 2016
5DG6
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2.35A resolution structure of Norovirus 3CL protease in complex an oxadiazole-based, cell permeable macrocyclic (21-mer) inhibitor
分子名称: 3C-LIKE PROTEASE, CHLORIDE ION, tert-butyl [(4S,7S,10S)-7-(cyclohexylmethyl)-10-(hydroxymethyl)-5,8,13-trioxo-23-oxa-6,9,14,21,22-pentaazabicyclo[18.2.1]tricosa-1(22),20-dien-4-yl]carbamate
著者Lovell, S, Battaile, K.P, Mehzabeen, N, Damalanka, V.C, Kim, Y, Alliston, K.R, Weerawarna, P.M, Kankanamalage, A.C.G, Lushington, G.H, Chang, K.-O, Groutas, W.C.
登録日2015-08-27
公開日2016-02-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Oxadiazole-Based Cell Permeable Macrocyclic Transition State Inhibitors of Norovirus 3CL Protease.
J.Med.Chem., 59, 2016
5K3J
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BU of 5k3j by Molmil
Crystals structure of Acyl-CoA oxidase-2 in Caenorhabditis elegans bound with FAD, ascaroside-CoA, and ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Acyl-coenzyme A oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Zhang, X, Li, K, Jones, R.A, Bruner, S.D, Butcher, R.A.
登録日2016-05-19
公開日2016-08-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans.
Proc.Natl.Acad.Sci.USA, 113, 2016
8JJR
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BU of 8jjr by Molmil
Cryo-EM structure of Symbiodinium photosystem I
分子名称: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Zhao, L.S, Wang, N, Li, K, Zhang, Y.Z, Liu, L.N.
登録日2023-05-31
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Architecture of symbiotic dinoflagellate photosystem I-light-harvesting supercomplex in Symbiodinium.
Nat Commun, 15, 2024
7UX5
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Structure of PDL1 in complex with FP28136, a Helicon Polypeptide
分子名称: Helicon FP28136, N,N'-(1,4-phenylene)diacetamide, Programmed cell death 1 ligand 1
著者Agarwal, S, Li, K, Tokareva, O, Thomson, T, Travaline, T, Wahl, S, Verdine, G, McGee, J.
登録日2022-05-05
公開日2022-12-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献De novo mapping of alpha-helix recognition sites on protein surfaces using unbiased libraries.
Proc.Natl.Acad.Sci.USA, 119, 2022
8GO3
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Cryo-EM structure of Escherichia coli cytochrome bo3 in DDM detergent
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, COPPER (II) ION, Cytochrome bo(3) ubiquinol oxidase subunit 1, ...
著者Cao, H.Y, Li, K, Li, C.Y.
登録日2022-08-24
公開日2023-08-30
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Cryo-EM structure of Escherichia coli cytochrome bo3 in DDM detergent
To Be Published
8IVZ
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Crystal structure of talin R7 in complex with KANK1 KN motif
分子名称: KN motif and ankyrin repeat domains 1, Talin-1
著者Xu, Y, Li, K, Wei, Z, Cong, Y.
登録日2023-03-29
公開日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献KANK1 shapes focal adhesions by orchestrating protein binding, mechanical force sensing, and phase separation.
Cell Rep, 42, 2023
8GSP
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Complex of FMDV A/WH/CHA/09 and bovine neutralizing scFv antibody W2
分子名称: A/WH/CHA/09 VP1, A/WH/CHA/09 VP2, A/WH/CHA/09 VP3, ...
著者He, Y, Li, K.
登録日2022-09-06
公開日2023-10-11
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Conserved antigen structures and antibody-driven variations on foot-and-mouth disease virus serotype A revealed by bovine neutralizing monoclonal antibodies.
Plos Pathog., 19, 2023
7M6T
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Crystal structure of SOCS2/ElonginB/ElonginC bound to a non-canonical peptide that enhances phospho-peptide binding
分子名称: Elongin-B, Elongin-C, Non-canonical peptide F3, ...
著者Kershaw, N.J, Li, K, Linossi, E.M, Nicholson, S.E.
登録日2021-03-26
公開日2021-10-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.194 Å)
主引用文献Discovery of an exosite on the SOCS2-SH2 domain that enhances SH2 binding to phosphorylated ligands.
Nat Commun, 12, 2021
8H8F
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Structure of Xenopus tropicalis acid-sensitive outwardly rectifying channel ASOR (resting state)
分子名称: Proton-activated chloride channel
著者Chi, P, Wang, X, Li, J, Li, K, Zhang, Y, Geng, J, Wu, J, Deng, D.
登録日2022-10-22
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Structure of Xenopus tropicalis acid-sensitive outwardly rectifying channel ASOR (resting state)
To Be Published
8H8E
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Structure of the dimeric Xenopus tropical acid-sensitive outwardly rectifying channel ASOR trimer bound with tRNA (closed state)
分子名称: Proton-activated chloride channel, tRNA (75-MER)of Spodoptera frugiperda
著者Chi, P, Wang, X, Li, J, Li, K, Zhang, Y, Geng, J, Wu, J, Deng, D.
登録日2022-10-22
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (3.81 Å)
主引用文献Structure of the dimeric Xenopus tropical acid-sensitive outwardly rectifying channel ASOR trimer bound with tRNA (closed state)
To Be Published
8H8D
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Structure of Xenopus tropicalis acid-sensitive outwardly rectifying channel ASOR trimer bound with tRNA (intermediate state)
分子名称: Proton-activated chloride channel
著者Chi, P, Wang, X, Li, J, Li, K, Zhang, Y, Geng, J, Wu, J, Deng, D.
登録日2022-10-22
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (4.26 Å)
主引用文献Structure of Xenopus tropicalis acid-sensitive outwardly rectifying channel ASOR trimer bound with tRNA (intermediate state)
To Be Published
7Y8A
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Cryo-EM structure of cryptophyte photosystem I
分子名称: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol, (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol, (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol, ...
著者Zhao, L.S, Zhang, Y.Z, Liu, L.N, Li, K.
登録日2022-06-23
公開日2023-04-12
最終更新日2023-07-12
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Structural basis and evolution of the photosystem I-light-harvesting supercomplex of cryptophyte algae.
Plant Cell, 35, 2023

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件を2024-07-24に公開中

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