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PDB: 97 results

3LKT
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BU of 3lkt by Molmil
Tyrosine 447 of Protocatechuate 3,4-Dioxygenase Controls Efficient Progress Through Catalysis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Lipscomb, J.D, Purpero, V.M.
Deposit date:2010-01-27
Release date:2011-02-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Tyrosine 447 of Protocatechuate 3,4-Dioxygenase Controls Efficient Progress Through Catalysis
To be Published
5HYG
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BU of 5hyg by Molmil
CmlI (peroxo bound state), arylamine oxygenase of chloramphenicol biosynthetic pathway
Descriptor: FE (III) ION, HYDROGEN PEROXIDE, L(+)-TARTARIC ACID, ...
Authors:Knoot, C.J, Lipscomb, J.D.
Deposit date:2016-02-01
Release date:2016-06-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of CmlI, the arylamine oxygenase from the chloramphenicol biosynthetic pathway.
J.Biol.Inorg.Chem., 21, 2016
5HYH
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BU of 5hyh by Molmil
CmlI (chemically reduced state), arylamine oxygenase of chloramphenicol biosynthetic pathway
Descriptor: FE (III) ION, L(+)-TARTARIC ACID, Uncharacterized protein
Authors:Knoot, C.J, Lipscomb, J.D.
Deposit date:2016-02-01
Release date:2016-06-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of CmlI, the arylamine oxygenase from the chloramphenicol biosynthetic pathway.
J.Biol.Inorg.Chem., 21, 2016
3PCD
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BU of 3pcd by Molmil
PROTOCATECHUATE 3,4-DIOXYGENASE Y447H MUTANT
Descriptor: BETA-MERCAPTOETHANOL, CARBONATE ION, FE (III) ION, ...
Authors:Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-11-24
Release date:1998-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The axial tyrosinate Fe3+ ligand in protocatechuate 3,4-dioxygenase influences substrate binding and product release: evidence for new reaction cycle intermediates.
Biochemistry, 37, 1998
3PCN
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BU of 3pcn by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3,4-DIHYDROXYPHENYLACETATE
Descriptor: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-08-19
Release date:1998-02-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure and resonance Raman studies of protocatechuate 3,4-dioxygenase complexed with 3,4-dihydroxyphenylacetate.
Biochemistry, 36, 1997
3LXV
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BU of 3lxv by Molmil
Tyrosine 447 of Protocatechuate 3,4-Dioxygenase Controls Efficient Progress Through Catalysis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-NITROCATECHOL, BETA-MERCAPTOETHANOL, ...
Authors:Purpero, V.M, Lipscomb, J.D.
Deposit date:2010-02-25
Release date:2011-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tyrosine 447 of Protocatechuate 3,4-Dioxygenase Controls Efficient Progress Through Catalysis
To be Published, 2010
3MI5
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BU of 3mi5 by Molmil
Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Descriptor: BETA-MERCAPTOETHANOL, CATECHOL, CHLORIDE ION, ...
Authors:Purpero, V.M, Lipscomb, J.D.
Deposit date:2010-04-09
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
To be Published
3MI1
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BU of 3mi1 by Molmil
Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, FE (III) ION, ...
Authors:Purpero, V.M, Lipscomb, J.D.
Deposit date:2010-04-09
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
To be Published
4WHQ
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BU of 4whq by Molmil
Alkylperoxo reaction intermediate trapped in Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 6.5
Descriptor: (6S)-4-fluoro-6-hydroperoxy-6-hydroxycyclohexa-2,4-dien-1-one, 4-fluorobenzene-1,2-diol, BETA-MERCAPTOETHANOL, ...
Authors:Knoot, C.J, Purpero, V.M, Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WHO
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BU of 4who by Molmil
Resting Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 8.5
Descriptor: BETA-MERCAPTOETHANOL, BICARBONATE ION, FE (III) ION, ...
Authors:Knoot, C.J, Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WHS
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BU of 4whs by Molmil
4-fluorocatechol bound to Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 8.5
Descriptor: 4-fluorobenzene-1,2-diol, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Knoot, C.J, Purpero, V.M, Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
3PCG
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BU of 3pcg by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH THE INHIBITOR 4-HYDROXYPHENYLACETATE
Descriptor: 4-HYDROXYPHENYLACETATE, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Elango, N, Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-04-29
Release date:1998-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site.
Biochemistry, 36, 1997
3PCE
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BU of 3pce by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-HYDROXYPHENYLACETATE
Descriptor: 3-HYDROXYPHENYLACETATE, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Elango, N, Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-04-29
Release date:1998-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site.
Biochemistry, 36, 1997
3PCC
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BU of 3pcc by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 4-HYDROXYBENZOATE
Descriptor: BETA-MERCAPTOETHANOL, FE (III) ION, P-HYDROXYBENZOIC ACID, ...
Authors:Elango, N, Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-04-29
Release date:1998-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site.
Biochemistry, 36, 1997
3PCF
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BU of 3pcf by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-FLURO-4-HYDROXYBENZOATE
Descriptor: 3-FLUORO-4-HYDROXYBENZOIC ACID, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Orville, A.M, Elango, N, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-06-27
Release date:1998-01-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site.
Biochemistry, 36, 1997
3PCB
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BU of 3pcb by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-HYDROXYBENZOATE
Descriptor: 3-HYDROXYBENZOIC ACID, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Elango, N, Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-04-25
Release date:1998-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site.
Biochemistry, 36, 1997
3PCA
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BU of 3pca by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3,4-DIHYDROXYBENZOATE
Descriptor: 3,4-DIHYDROXYBENZOIC ACID, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-07-18
Release date:1998-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of substrate and substrate analog complexes of protocatechuate 3,4-dioxygenase: endogenous Fe3+ ligand displacement in response to substrate binding.
Biochemistry, 36, 1997
3PCM
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BU of 3pcm by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 6-HYDROXYNICOTINIC ACID N-OXIDE AND CYANIDE
Descriptor: 6-HYDROXYISONICOTINIC ACID N-OXIDE, CYANIDE ION, FE (III) ION, ...
Authors:Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-07-18
Release date:1998-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structures of substrate and substrate analog complexes of protocatechuate 3,4-dioxygenase: endogenous Fe3+ ligand displacement in response to substrate binding.
Biochemistry, 36, 1997
3PCI
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BU of 3pci by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-IODO-4-HYDROXYBENZOATE
Descriptor: 3-IODO-4-HYDROXYBENZOIC ACID, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Orville, A.M, Elango, N, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-07-02
Release date:1998-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site.
Biochemistry, 36, 1997
3PCK
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BU of 3pck by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 6-HYDROXYNICOTINIC ACID N-OXIDE
Descriptor: 6-HYDROXYISONICOTINIC ACID N-OXIDE, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-07-18
Release date:1998-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structures of substrate and substrate analog complexes of protocatechuate 3,4-dioxygenase: endogenous Fe3+ ligand displacement in response to substrate binding.
Biochemistry, 36, 1997
3PCH
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BU of 3pch by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-CHLORO-4-HYDROXYBENZOATE
Descriptor: 3-CHLORO-4-HYDROXYBENZOIC ACID, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Orville, A.M, Elango, N, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-07-01
Release date:1998-01-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site.
Biochemistry, 36, 1997
3PCJ
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BU of 3pcj by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 2-HYDROXYISONICOTINIC ACID N-OXIDE
Descriptor: 2-HYDROXYISONICOTINIC ACID N-OXIDE, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-07-18
Release date:1998-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structures of substrate and substrate analog complexes of protocatechuate 3,4-dioxygenase: endogenous Fe3+ ligand displacement in response to substrate binding.
Biochemistry, 36, 1997
3PCL
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BU of 3pcl by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 2-HYDROXYISONICOTINIC ACID N-OXIDE AND CYANIDE
Descriptor: 2-HYDROXYISONICOTINIC ACID N-OXIDE, CYANIDE ION, FE (III) ION, ...
Authors:Orville, A.M, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-07-18
Release date:1998-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of substrate and substrate analog complexes of protocatechuate 3,4-dioxygenase: endogenous Fe3+ ligand displacement in response to substrate binding.
Biochemistry, 36, 1997
4JO0
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BU of 4jo0 by Molmil
Crystal Structure of CmlA, a diiron beta-hydroxylase from Streptomyces venezuelae
Descriptor: ACETATE ION, CmlA, FE (III) ION, ...
Authors:Knoot, C.J, Makris, T.M, Wilmot, C.M, Lipscomb, J.D.
Deposit date:2013-03-16
Release date:2013-09-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure of a Dinuclear Iron Cluster-Containing beta-Hydroxylase Active in Antibiotic Biosynthesis.
Biochemistry, 52, 2013
3BZA
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BU of 3bza by Molmil
Structure of Mn-substituted Homoprotocatechuate 2,3-Dioxygenase from B.fuscum at 1.7 Ang resolution
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2008-01-17
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Swapping metals in Fe- and Mn-dependent dioxygenases: evidence for oxygen activation without a change in metal redox state.
Proc.Natl.Acad.Sci.Usa, 105, 2008

 

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