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PDB: 214 件
377D
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5'-R(*CP*GP*UP*AP*CP*DG)-3'
分子名称: RNA-DNA (5'-R(*CP*GP*UP*AP*CP*DG)-3')
著者Biswas, R, Mitra, S.N, Sundaralingam, M.
登録日1998-01-26
公開日1998-08-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献1.76 A structure of a pyrimidine start alternating A-RNA hexamer r(CGUAC)dG.
Acta Crystallogr.,Sect.D, 54, 1998
6TVI
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Salmonella typhimurium mutant neuraminidase (D100S)+ DANA
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, GLYCEROL, Sialidase
著者Garman, E.F, Salinger, M.T, Murray, J.W, Laver, W.G, Kuhn, P, Vimr, E.R.
登録日2020-01-09
公開日2020-02-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Salmonella typhimurium mutant neuraminidase (D100S)+ DANA
To Be Published
1DQH
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CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS
分子名称: RNA (5'-R(*CP*AP*GP*GP*GP*UP*CP*GP*GP*C)-3'), RNA (5'-R(*GP*CP*CP*AP*CP*CP*CP*UP*G)-3')
著者Xiong, Y, Sundaralingam, M.
登録日2000-01-04
公開日2000-11-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Two crystal forms of helix II of Xenopus laevis 5S rRNA with a cytosine bulge.
RNA, 6, 2000
1DNS
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BASE ONLY BINDING OF SPERMINE IN THE DEEP GROOVE OF THE A-DNA OCTAMER D(GTGTACAC)
分子名称: DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3'), SPERMINE
著者Jain, S.C, Zon, G, Sundaralingam, M.
登録日1989-02-22
公開日1990-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Base only binding of spermine in the deep groove of the A-DNA octamer d(GTGTACAC).
Biochemistry, 28, 1989
1DN8
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STRUCTURE OF A Z-DNA WITH TWO DIFFERENT BACKBONE CHAIN CONFORMATIONS. STABILIZATION OF THE DECADEOXYOLIGONUCLEOTIDE D(CGTACGTACG) BY (CO(NH3)6)3+ BINDING TO THE GUANINE
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*P*CP*GP*TP*AP*CP*GP*TP*AP*CP*G)-3')
著者Brennan, R.G, Westhof, E, Sundaralingam, M.
登録日1987-05-12
公開日1988-04-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a Z-DNA with two different backbone chain conformations. Stabilization of the decadeoxyoligonucleotide d(CGTACGTACG) by [Co(NH3)6]3+ binding to the guanine.
J.Biomol.Struct.Dyn., 3, 1986
1DQF
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CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS
分子名称: CALCIUM ION, RNA (5'-R(*CP*AP*GP*GP*GP*UP*CP*GP*GP*C)-3'), RNA (5'-R(*GP*CP*CP*AP*CP*CP*CP*UP*G)-3')
著者Xiong, Y, Sundaralingam, M.
登録日2000-01-04
公開日2000-11-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Two crystal forms of helix II of Xenopus laevis 5S rRNA with a cytosine bulge.
RNA, 6, 2000
1DVL
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CRYSTAL STRUCTURE OF THE 1:1 NETROPSIN-DECAMER D(CCIICICCII)2 COMPLEX WITH ONLY ONE DRUG BOUND AT ONE END
分子名称: 5'-D(*CP*CP*IP*IP*CP*IP*CP*CP*IP*I)-3', NETROPSIN
著者Shi, K, Mitra, S.N, Sundaralingam, M.
登録日2000-01-21
公開日2002-03-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the 1:1 netropsin-decamer d(CCIICICCII)2 complex with a single bound netropsin.
Acta Crystallogr.,Sect.D, 58, 2002
1EFO
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CRYSTAL STRUCTURE OF AN ADENINE BULGE IN THE RNA CHAIN OF A DNA/RNA HYBRID, D(CTCCTCTTC)/R(GAAGAGAGAG)
分子名称: DNA (5'-D(*CP*TP*CP*CP*TP*CP*TP*TP*C)-3'), RNA (5'-R(*GP*AP*AP*GP*AP*GP*AP*GP*AP*G)-3')
著者Sudarsanakumar, C, Xiong, Y, Sundaralingam, M.
登録日2000-02-09
公開日2000-05-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of an adenine bulge in the RNA chain of a DNA.RNA hybrid, d(CTCCTCTTC).r(gaagagagag).
J.Mol.Biol., 299, 2000
1FLV
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STRUCTURE OF THE OXIDIZED LONG CHAIN FLAVODOXIN FROM ANABAENA 7120 AT 2 ANGSTROMS RESOLUTION
分子名称: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
著者Rao, S.T, Sundaralingam, M.
登録日1992-07-02
公開日1993-10-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the oxidized long-chain flavodoxin from Anabaena 7120 at 2 A resolution.
Protein Sci., 1, 1992
6TRG
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Salmonella typhimurium neuraminidase mutant (D100S)
分子名称: GLYCEROL, PHOSPHATE ION, Sialidase
著者Garman, E.F, Salinger, M.T, Murray, J.W, Laver, W.G, Kuhn, P, Vimr, E.R.
登録日2019-12-18
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Salmonella typhimurium neuraminidase mutant (D100S)
To Be Published
2FDP
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Crystal structure of beta-secretase complexed with an amino-ethylene inhibitor
分子名称: Beta-secretase 1, N1-((2S,3S,5R)-3-AMINO-6-(4-FLUOROPHENYLAMINO)-5-METHYL-6-OXO-1-PHENYLHEXAN-2-YL)-N3,N3-DIPROPYLISOPHTHALAMIDE
著者Yang, W, Lu, W, Lu, Y, Zhong, M, Sun, J, Thomas, A.E, Wilkinson, J.M, Fucini, R.V, Lam, M, Randal, M, Shi, X.P, Jacobs, J.W, McDowell, R.S, Gordon, E.M, Ballinger, M.D.
登録日2005-12-14
公開日2006-01-24
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Aminoethylenes: a tetrahedral intermediate isostere yielding potent inhibitors of the aspartyl protease BACE-1.
J.Med.Chem., 49, 2006
1VTF
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STRUCTURE OF 5'-D(*(BRO)CP*GP*(BRO)CP*G)-3' IN COMPLEX WITH PROFLAVINE
分子名称: DNA (5'-D(*(BRO)CP*GP*(BRO)CP*G)-3'), PROFLAVIN
著者Westhof, E, Hosur, M.V, Sundaralingam, M.
登録日1988-12-13
公開日2011-07-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Nonintercalative binding of proflavin to Z-DNA: structure of a complex between d(5BrC-G-5BrC-G) and proflavin.
Biochemistry, 27, 1988
1W36
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RecBCD:DNA complex
分子名称: CALCIUM ION, DNA HAIRPIN, EXODEOXYRIBONUCLEASE V ALPHA CHAIN, ...
著者Singleton, M.R, Dillingham, M.S, Gaudier, M, C Kowalczykowski, S, Wigley, D.B.
登録日2004-07-13
公開日2004-11-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure of Recbcd Enzyme Reveals a Machine for Processing DNA Breaks
Nature, 432, 2004
2GRB
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Crystal Structure of an RNA Quadruplex Containing Inosine-tetrad
分子名称: 5'-R(*(U33)P*GP*IP*GP*GP*U)-3', POTASSIUM ION, STRONTIUM ION
著者Pan, B, Shi, K, Sundaralingam, M.
登録日2006-04-24
公開日2006-11-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of an RNA quadruplex containing inosine tetrad: implications for the roles of NH2 group in purine tetrads.
J.Mol.Biol., 363, 2006
1V58
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Crystal Structure Of the Reduced Protein Disulfide Bond Isomerase DsbG
分子名称: SULFATE ION, Thiol:disulfide interchange protein dsbG
著者Heras, B, Edeling, M.A, Schirra, H.J, Raina, S, Martin, J.L.
登録日2003-11-21
公開日2004-06-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of the DsbG disulfide isomerase reveal an unstable disulfide
Proc.Natl.Acad.Sci.USA, 101, 2004
4BAB
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Redesign of a Phenylalanine Aminomutase into a beta-Phenylalanine Ammonia Lyase
分子名称: PHENYLALANINE AMINOMUTASE
著者Bartsch, S, Wybenga, G.G, Jansen, M, Heberling, M.M, Wu, B, Dijkstra, B.W, Janssen, D.B.
登録日2012-09-12
公開日2013-01-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Redesign of a Phenylalanine Aminomutase Into a Phenylalanine Ammonia Lyase
To be Published
2G91
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Crystal Structure Analysis of the an RNA nonamer r(GGUGCGC)d(BrC)r(C)
分子名称: 5'-R(*GP*GP*UP*GP*CP*GP*CP*(CBR)P*C-3', MAGNESIUM ION
著者Shi, K, Pan, B, Sundaralingam, M.
登録日2006-03-04
公開日2007-04-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of an RNA nonamer r(GGUGCGC)d(BrC)r(C) at 1.5 A resolution
To be Published
438D
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STRUCTURE OF AN RNA DUPLEX R(GGGCGCUCC)2 WITH NON-ADJACENT G.U BASE PAIRS
分子名称: RNA (5'-R(*GP*GP*GP*CP*GP*CP*UP*CP*C)-3')
著者Shi, K, Wahl, M.C, Sundaralingam, M.
登録日1998-12-28
公開日1999-05-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of an RNA duplex r(G GCGC CC)2 with non-adjacent G*U base pairs.
Nucleic Acids Res., 27, 1999
4BAA
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Redesign of a Phenylalanine Aminomutase into a beta-Phenylalanine Ammonia Lyase
分子名称: PHENYLALANINE AMMONIA-LYASE
著者Bartsch, S, Wybenga, G.G, Jansen, M, Heberling, M.M, Wu, B, Dijkstra, B.W, Janssen, D.B.
登録日2012-09-12
公開日2013-01-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Redesign of a Phenylalanine Aminomutase Into a Phenylalanine Ammonia Lyase
To be Published
1VTB
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THE HEXAGONAL CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GTGTACAC) AND ITS COMPARISON WITH THE TETRAGONAL STRUCTURE CORRELATED VARIATIONS IN HELICAL PARAMETERS
分子名称: DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3')
著者Jain, S.C, Zon, G, Sundaralingam, M.
登録日1991-05-28
公開日2011-07-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Hexagonal Crystal Structure of the A-DNA Octamer d(GTGTACAC) and Its Comparison with the Tetragonal Structure Correlated Variations in Helical Parameters
Biochemistry, 30, 1991
2PJR
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HELICASE PRODUCT COMPLEX
分子名称: DNA (5'-D(*AP*CP*TP*GP*C)-3'), DNA (5'-D(*GP*C)-3'), DNA (5'-D(*TP*TP*TP*TP*T)-3'), ...
著者Velankar, S.S, Soultanas, P, Dillingham, M.S, Subramanya, H.S, Wigley, D.B.
登録日1999-03-12
公開日1999-04-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism.
Cell(Cambridge,Mass.), 97, 1999
1V57
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Crystal Structure of the Disulfide Bond Isomerase DsbG
分子名称: SULFATE ION, Thiol:disulfide interchange protein dsbG
著者Heras, B, Edeling, M.A, Schirra, H.J, Raina, S, Martin, J.L.
登録日2003-11-21
公開日2004-06-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the DsbG disulfide isomerase reveal an unstable disulfide
Proc.Natl.Acad.Sci.USA, 101, 2004
246D
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STRUCTURE OF THE PURINE-PYRIMIDINE ALTERNATING RNA DOUBLE HELIX, R(GUAUAUA)D(C) , WITH A 3'-TERMINAL DEOXY RESIDUE
分子名称: DNA/RNA (5'-R(*GP*UP*AP*UP*AP*UP*AP*)-D(*C)-3'), SODIUM ION
著者Wahl, M.C, Ban, C, Sekharudu, C, Ramakrishnan, B, Sundaralingam, M.
登録日1996-01-25
公開日1996-08-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the purine-pyrimidine alternating RNA double helix, r(GUAUAUA)d(C), with a 3'-terminal deoxy residue.
Acta Crystallogr.,Sect.D, 52, 1996
100D
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CRYSTAL STRUCTURE OF THE HIGHLY DISTORTED CHIMERIC DECAMER R(C)D(CGGCGCCG)R(G)-SPERMINE COMPLEX-SPERMINE BINDING TO PHOSPHATE ONLY AND MINOR GROOVE TERTIARY BASE-PAIRING
分子名称: DNA/RNA (5'-R(*CP*)-D(*CP*GP*GP*CP*GP*CP*CP*GP*)-R(*G)-3'), SPERMINE
著者Ban, C, Ramakrishnan, B, Sundaralingam, M.
登録日1994-12-05
公開日1995-03-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the highly distorted chimeric decamer r(C)d(CGGCGCCG)r(G).spermine complex--spermine binding to phosphate only and minor groove tertiary base-pairing.
Nucleic Acids Res., 22, 1994
116D
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CRYSTAL AND MOLECULAR STRUCTURE OF THE A-DNA DODECAMER D(CCGTACGTACGG): CHOICE OF FRAGMENT HELICAL AXIS
分子名称: DNA (5'-D(*CP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*G)-3')
著者Bingman, C.A, Zon, G, Sundaralingam, M.
登録日1993-02-10
公開日1993-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal and molecular structure of the A-DNA dodecamer d(CCGTACGTACGG). Choice of fragment helical axis.
J.Mol.Biol., 227, 1992

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