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PDB: 308 results

473D
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BU of 473d by Molmil
NI2+/GUANINE INTERACTIONS AND NETROPSIN/GUANINE STACKING IN D(CGTATATACG)2
Descriptor: DNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*CP*G)-3'), NETROPSIN, NICKEL (II) ION
Authors:Abrescia, N.G.A, Malinina, L, Subirana, J.A.
Deposit date:1999-05-18
Release date:1999-12-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Stacking interaction of guanine with netropsin in the minor groove of d(CGTATATACG)2.
J.Mol.Biol., 294, 1999
1NZR
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BU of 1nzr by Molmil
CRYSTAL STRUCTURE OF THE AZURIN MUTANT NICKEL-TRP48MET FROM PSEUDOMONAS AERUGINOSA AT 2.2 ANGSTROMS RESOLUTION
Descriptor: AZURIN, NICKEL (II) ION, NITRATE ION
Authors:Tsai, L.-C, Sjolin, L, Langer, V, Bonander, N, Karlsson, B.G, Vanngard, T, Hammann, C, Nar, H.
Deposit date:1994-12-09
Release date:1995-02-27
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the azurin mutant nickel-Trp48Met from Pseudomonas aeruginosa at 2.2 A resolution.
Acta Crystallogr.,Sect.D, 51, 1995
426D
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BU of 426d by Molmil
THE STRUCTURE OF MOST STUDIED DNA FRAGMENT CHANGES UNDER THE INFLUENCE OF IONS: A NEW PACKING OF D(CGCGAATTCGCG)
Descriptor: 5'-D(CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', CALCIUM ION
Authors:Liu, J, Malinina, L, Subirana, J.A.
Deposit date:1998-09-17
Release date:1998-11-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the most studied DNA fragment changes under the influence of ions: a new packing of d(CGCGAATTCGCG).
FEBS Lett., 438, 1998
1R9F
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BU of 1r9f by Molmil
Crystal structure of p19 complexed with 19-bp small interfering RNA
Descriptor: 5'-R(*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3', 5'-R(*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3', Core protein P19, ...
Authors:Ye, K, Malinina, L, Patel, D.J.
Deposit date:2003-10-28
Release date:2004-01-27
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Recognition of small interfering RNA by a viral suppressor of RNA
Nature, 426, 2003
2ASL
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BU of 2asl by Molmil
oxoG-modified Postinsertion Binary Complex
Descriptor: 5'-D(*CP*T*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DOC))-3', CALCIUM ION, ...
Authors:Rechkoblit, O, Malinina, L, Cheng, Y, Kuryavyi, V, Broyde, S, Geacintov, N.E, Patel, D.J.
Deposit date:2005-08-23
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion
Plos Biol., 4, 2006
2TSB
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BU of 2tsb by Molmil
AZURIN MUTANT M121A-AZIDE
Descriptor: AZIDE ION, AZURIN AZIDE, COPPER (II) ION
Authors:Tsai, L.-C, Bonander, N, Harata, K, Karlsson, B.G, Vanngard, T, Langer, V, Sjolin, L.
Deposit date:1996-05-10
Release date:1996-11-08
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mutant Met121Ala of Pseudomonas aeruginosa azurin and its azide derivative: crystal structures and spectral properties.
Acta Crystallogr.,Sect.D, 52, 1996
2TSA
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BU of 2tsa by Molmil
AZURIN MUTANT M121A
Descriptor: AZURIN, COPPER (II) ION
Authors:Tsai, L.-C, Bonander, N, Harata, K, Karlsson, B.G, Vanngard, T, Langer, V, Sjolin, L.
Deposit date:1996-05-10
Release date:1996-11-08
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutant Met121Ala of Pseudomonas aeruginosa azurin and its azide derivative: crystal structures and spectral properties.
Acta Crystallogr.,Sect.D, 52, 1996
2ASJ
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BU of 2asj by Molmil
oxoG-modified Preinsertion Binary Complex
Descriptor: 5'-D(*CP*TP*AP*AP*CP*(8OG)*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3', CALCIUM ION, ...
Authors:Rechkoblit, O, Malinina, L, Cheng, Y, Kuryavyi, V, Broyde, S, Geacintov, N.E, Patel, D.J.
Deposit date:2005-08-23
Release date:2006-01-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion
Plos Biol., 4, 2006
1G2N
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BU of 1g2n by Molmil
CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF THE ULTRASPIRACLE PROTEIN USP, THE ORTHOLOG OF RXRS IN INSECTS
Descriptor: L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, ULTRASPIRACLE PROTEIN
Authors:Billas, I.M.L, Moulinier, L, Rochel, N, Moras, D, Structural Proteomics in Europe (SPINE)
Deposit date:2000-10-20
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the ligand-binding domain of the ultraspiracle protein USP, the ortholog of retinoid X receptors in insects.
J.Biol.Chem., 276, 2001
1OOW
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BU of 1oow by Molmil
The crystal structure of the spinach plastocyanin double mutant G8D/L12E gives insight into its low reactivity towards photosystem 1 and cytochrome f
Descriptor: COPPER (II) ION, Plastocyanin, chloroplast
Authors:Jansson, H, Okvist, M, Jacobson, F, Ejdeback, M, Hansson, O, Sjolin, L.
Deposit date:2003-03-04
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the spinach plastocyanin double mutant G8D/L12E gives insight into its low reactivity towards photosystem 1 and cytochrome f.
Biochim.Biophys.Acta, 1607, 2003
1SDY
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BU of 1sdy by Molmil
STRUCTURE SOLUTION AND MOLECULAR DYNAMICS REFINEMENT OF THE YEAST CU,ZN ENZYME SUPEROXIDE DISMUTASE
Descriptor: COPPER (II) ION, COPPER,ZINC SUPEROXIDE DISMUTASE, ZINC ION
Authors:Djinovic, K, Gatti, G, Coda, A, Antolini, L, Pelosi, G, Desideri, A, Falconi, M, Marmocchi, F, Rotilio, G, Bolognesi, M.
Deposit date:1991-06-14
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure solution and molecular dynamics refinement of the yeast Cu,Zn enzyme superoxide dismutase.
Acta Crystallogr.,Sect.B, 47, 1991
3RIC
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BU of 3ric by Molmil
Crystal Structure of D48V||A47D mutant of Human Glycolipid Transfer Protein complexed with 3-O-sulfo-galactosylceramide containing nervonoyl acyl chain (24:1)
Descriptor: (15Z)-N-((1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D-GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-ENYL)TETRACOS-15-ENAMIDE, Glycolipid transfer protein
Authors:Samygina, V, Ochoa-Lizarralde, B, Patel, D.J, Brown, R.E, Malinina, L.
Deposit date:2011-04-13
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Enhanced selectivity for sulfatide by engineered human glycolipid transfer protein.
Structure, 19, 2011
1G6D
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BU of 1g6d by Molmil
STRUCTURE OF PEPTIDYL-D(CGCAATTGCG) IN THE PRESENCE OF ZINC IONS
Descriptor: PEPTIDYL-D(CGCAATTGCG), ZINC ION
Authors:Soler-Lopez, M, Malinina, L, Tereshko, V, Zarytova, V, Subirana, J.A.
Deposit date:2000-11-04
Release date:2002-04-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Interaction of zinc ions with d(CGCAATTGCG) in a 2.9 A resolution X-ray structure.
J.Biol.Inorg.Chem., 7, 2002
1FW4
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BU of 1fw4 by Molmil
CRYSTAL STRUCTURE OF E. COLI FRAGMENT TR2C FROM CALMODULIN TO 1.7 A RESOLUTION
Descriptor: CALCIUM ION, CALMODULIN
Authors:Olsson, L.-L, Sjolin, L.
Deposit date:2000-09-21
Release date:2001-05-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of Escherichia coli fragment TR2C from calmodulin to 1.7 A resolution.
Acta Crystallogr.,Sect.D, 57, 2001
2A3T
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BU of 2a3t by Molmil
Cu-containing nitrite reductase
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, MAGNESIUM ION
Authors:Jacobson, F, Guo, H, Olesen, K, Okvist, M, Neutze, R, Sjolin, L.
Deposit date:2005-06-27
Release date:2005-08-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of the oxidized and reduced forms of nitrite reductase from Rhodobacter sphaeroides 2.4.3 at high pH: changes in the interactions of the type 2 copper.
Acta Crystallogr.,Sect.D, 61, 2005
2ATL
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BU of 2atl by Molmil
Unmodified Insertion Ternary Complex
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*CP*T*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3', ...
Authors:Rechkoblit, O, Malinina, L, Cheng, Y, Kuryavyi, V, Broyde, S, Geacintov, N.E, Patel, D.J.
Deposit date:2005-08-25
Release date:2006-01-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion
Plos Biol., 4, 2006
1SP8
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BU of 1sp8 by Molmil
4-Hydroxyphenylpyruvate Dioxygenase
Descriptor: 4-Hydroxyphenylpyruvate Dioxygenase, FE (II) ION
Authors:Fritze, I.M, Linden, L, Freigang, J, Auerbach, G, Huber, R, Steinbacher, S.
Deposit date:2004-03-16
Release date:2004-09-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structures of Zea mays and Arabidopsis 4-Hydroxyphenylpyruvate Dioxygenase
Plant physiol., 134, 2004
2CJM
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BU of 2cjm by Molmil
Mechanism of CDK inhibition by active site phosphorylation: CDK2 Y15p T160p in complex with cyclin A structure
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CELL DIVISION PROTEIN KINASE 2, CYCLIN A2, ...
Authors:Welburn, J.P.I, Tucker, J, Johnson, T, Lindert, L, Morgan, M, Willis, A, Noble, M.E.M, Endicott, J.A.
Deposit date:2006-04-05
Release date:2006-04-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:How Tyrosine 15 Phosphorylation Inhibits the Activity of Cyclin-Dependent Kinase 2-Cyclin A.
J.Biol.Chem., 282, 2007
1SP9
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BU of 1sp9 by Molmil
4-Hydroxyphenylpyruvate Dioxygenase
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, FE (II) ION
Authors:Fritze, I.M, Linden, L, Freigang, J, Auerbach, G, Huber, R, Steinbacher, S.
Deposit date:2004-03-16
Release date:2004-09-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structures of Zea mays and Arabidopsis 4-Hydroxyphenylpyruvate Dioxygenase
Plant Physiol., 134, 2004
3RWV
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BU of 3rwv by Molmil
Crystal Structure of apo-form of Human Glycolipid Transfer Protein at 1.5 A resolution
Descriptor: Glycolipid transfer protein, SULFATE ION
Authors:Samygina, V, Cabo-Bilbao, A, Popov, A.N, Ochoa-Lizarralde, B, Goni-de-Cerio, F, Patel, D.J, Brown, R.E, Malinina, L.
Deposit date:2011-05-09
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Enhanced selectivity for sulfatide by engineered human glycolipid transfer protein.
Structure, 19, 2011
3S0K
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BU of 3s0k by Molmil
Crystal Structure of Human Glycolipid Transfer Protein complexed with glucosylceramide containing oleoyl acyl chain (18:1)
Descriptor: (9Z)-N-[(2S,3R,4E)-1-(beta-D-glucopyranosyloxy)-3-hydroxyoctadec-4-en-2-yl]octadec-9-enamide, Glycolipid transfer protein, NICKEL (II) ION
Authors:Cabo-Bilbao, A, Samygina, V, Popov, A.N, Ochoa-Lizarralde, B, Goni-de-Cerio, F, Patel, D.J, Brown, R.E, Malinina, L.
Deposit date:2011-05-13
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Enhanced selectivity for sulfatide by engineered human glycolipid transfer protein.
Structure, 19, 2011
1TEG
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BU of 1teg by Molmil
Crystal structure of the spinach plastocyanin mutants G8D/K30C/T69C and K30C/T69C- a study of the effect on crystal packing and thermostability from the introduction of a novel disulfide bond
Descriptor: CHLORIDE ION, COPPER (II) ION, Plastocyanin, ...
Authors:Okvist, M, Jacobson, F, Jansson, H, Hansson, O, Sjolin, L.
Deposit date:2004-05-25
Release date:2005-11-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Novel Disulfide Bonds Effect the Thermostability of Plastocyanin. Crystal structures of the triple plastocyanin mutant G8D/K30C/T69C and the double plastocyanin mutant K30C/T69C from spinach at 1.90 A and 1.96 A resolution, respectively.
To be Published
4E48
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BU of 4e48 by Molmil
Structure of 20mer double-helical RNA composed of CUG/CUG-repeats
Descriptor: 5'-R(P*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*C)-3', POTASSIUM ION, SULFATE ION
Authors:Katorcha, E, Malinina, L.
Deposit date:2012-03-12
Release date:2012-07-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural dynamics of double-helical RNAs composed of CUG/CUG- and CUG/CGG-repeats.
J.Biomol.Struct.Dyn., 30, 2012
4GHS
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BU of 4ghs by Molmil
Crystal structure of human GLTP bound with 12:0 disulfatide (orthorombic form; two subunits in asymmetric unit)
Descriptor: Glycolipid transfer protein, N-{(2S,3R,4E)-1-[(3,6-di-O-sulfo-beta-D-galactopyranosyl)oxy]-3-hydroxyoctadec-4-en-2-yl}dodecanamide
Authors:Samygina, V.R, Popov, A.N, Goni-de-Cerio, F, Cabo-Bilbao, A, Malinina, L.
Deposit date:2012-08-08
Release date:2013-06-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into lipid-dependent reversible dimerization of human GLTP.
Acta Crystallogr.,Sect.D, 69, 2013
4GHP
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BU of 4ghp by Molmil
Crystal Structure of D48V||A47D mutant of Human GLTP bound with 12:0 monosulfatide
Descriptor: Glycolipid transfer protein, N-{(2S,3R,4E)-3-hydroxy-1-[(3-O-sulfo-beta-D-galactopyranosyl)oxy]octadec-4-en-2-yl}dodecanamide
Authors:Samygina, V.R, Ochoa-Lizarralde, B, Popov, A.N, Malinina, L.
Deposit date:2012-08-08
Release date:2013-04-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into lipid-dependent reversible dimerization of human GLTP.
Acta Crystallogr.,Sect.D, 69, 2013

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數據於2024-07-24公開中

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