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PDB: 153 results

1PSQ
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Structure of a probable thiol peroxidase from Streptococcus pneumoniae
Descriptor: probable thiol peroxidase
Authors:Kniewel, R, Buglino, J, Solorzano, V, Wu, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-06-21
Release date:2003-07-08
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a probable thiol peroxidase from Streptococcus pneumoniae
To be Published
1Q98
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Structure of a Thiol Peroxidase from Haemophilus influenzae Rd
Descriptor: Thiol Peroxidase
Authors:Kniewel, R, Buglino, J, Solorzano, V, Wu, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-08-22
Release date:2003-09-09
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a Thiol Peroxidase from Haemophilus influenzae Rd
To be Published
1TK9
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BU of 1tk9 by Molmil
Crystal Structure of Phosphoheptose isomerase 1
Descriptor: Phosphoheptose isomerase 1
Authors:Rajashankar, K.R, Solorzano, V, Kniewel, R, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-08
Release date:2004-06-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of two putative phosphoheptose isomerases.
Proteins, 63, 2006
1T3U
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BU of 1t3u by Molmil
Unknown conserved bacterial protein from Pseudomonas aeruginosa PAO1
Descriptor: conserved hypothetical protein
Authors:Rajashankar, K.R, Kneiwel, R, Solorzano, V, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-04-27
Release date:2004-05-04
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a conserved hypothetical protein Pseudomonas aeruginosa PA01
To be Published
1TO6
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BU of 1to6 by Molmil
Glycerate kinase from Neisseria meningitidis (serogroup A)
Descriptor: Glycerate kinase, SULFATE ION
Authors:Rajashankar, K.R, Kniewel, R, Solorzano, V, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-13
Release date:2004-06-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Glycerate kinase from Neisseria meningitidis (serogroup A)
To be Published
1TQ8
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BU of 1tq8 by Molmil
Crystal Structure of protein Rv1636 from Mycobacterium tuberculosis H37Rv
Descriptor: hypothetical protein Rv1636
Authors:Rajashankar, K.R, Kniewel, R, Solorzano, V, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-16
Release date:2004-06-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of hypothetical protein Rv1636 from Mycobacterium tuberculosis H37Rv
To be Published
1P1M
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BU of 1p1m by Molmil
Structure of Thermotoga maritima amidohydrolase TM0936 bound to Ni and methionine
Descriptor: Hypothetical protein TM0936, METHIONINE, NICKEL (II) ION
Authors:Kniewel, R, Buglino, J.A, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-04-12
Release date:2003-04-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the hypothetical protein TM0936 from Thermotoga maritima at 1.5A bound to Ni and methionine
To be Published, 2003
8DAR
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BU of 8dar by Molmil
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex unbound but in the presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
Authors:Lee, H.G, Lima, C.D.
Deposit date:2022-06-14
Release date:2022-11-30
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3 Å)
Cite:SUMO enhances unfolding of SUMO-polyubiquitin-modified substrates by the Ufd1/Npl4/Cdc48 complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DAU
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Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to two folded ubiquitin moieties and one unfolded ubiquitin in presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP, state 1 (uA)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
Authors:Lee, H.G, Lima, C.D.
Deposit date:2022-06-14
Release date:2022-11-30
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:SUMO enhances unfolding of SUMO-polyubiquitin-modified substrates by the Ufd1/Npl4/Cdc48 complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DAW
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Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to three ubiquitin moieties and one unfolded ubiquitin in presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP, state 2 (uD)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
Authors:Lee, H.G, Lima, C.D.
Deposit date:2022-06-14
Release date:2022-11-30
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:SUMO enhances unfolding of SUMO-polyubiquitin-modified substrates by the Ufd1/Npl4/Cdc48 complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DAS
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BU of 8das by Molmil
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to two ubiquitin moieties in presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP, state 1 (intA)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
Authors:Lee, H.G, Lima, C.D.
Deposit date:2022-06-14
Release date:2022-11-30
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:SUMO enhances unfolding of SUMO-polyubiquitin-modified substrates by the Ufd1/Npl4/Cdc48 complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DAT
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BU of 8dat by Molmil
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to three ubiquitin moieties in presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP, state 1 (intB)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
Authors:Lee, H.G, Lima, C.D.
Deposit date:2022-06-14
Release date:2022-11-30
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:SUMO enhances unfolding of SUMO-polyubiquitin-modified substrates by the Ufd1/Npl4/Cdc48 complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DAV
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BU of 8dav by Molmil
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to two ubiquitin moieties and one unfolded ubiquitin in presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP, state 2 (uC)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
Authors:Lee, H.G, Lima, C.D.
Deposit date:2022-06-14
Release date:2022-11-30
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:SUMO enhances unfolding of SUMO-polyubiquitin-modified substrates by the Ufd1/Npl4/Cdc48 complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
1PSW
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BU of 1psw by Molmil
Structure of E. coli ADP-heptose lps heptosyltransferase II
Descriptor: ADP-HEPTOSE LPS HEPTOSYLTRANSFERASE II
Authors:Kniewel, R, Buglino, J, Solorzano, V, Wu, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-06-21
Release date:2003-07-08
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of E. coli ADP-heptose lps heptosyltransferase II
To be Published
1PUJ
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BU of 1puj by Molmil
Structure of B. subtilis YlqF GTPase
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, conserved hypothetical protein ylqF
Authors:Kniewel, R, Buglino, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-06-24
Release date:2003-07-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the YlqF GTPase from B. subtilis
To be Published
1PSU
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BU of 1psu by Molmil
Structure of the E. coli PaaI protein from the phyenylacetic acid degradation operon
Descriptor: Phenylacetic acid degradation protein PaaI
Authors:Kniewel, R, Buglino, J, Solorzano, V, Wu, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-06-21
Release date:2003-07-08
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure, function, and mechanism of the phenylacetate pathway hot dog-fold thioesterase PaaI.
J.Biol.Chem., 281, 2006
1PUI
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BU of 1pui by Molmil
Structure of EngB GTPase
Descriptor: Probable GTP-binding protein engB, SULFATE ION
Authors:Kniewel, R, Buglino, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-06-24
Release date:2003-07-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of an EngB GTPase
To be Published
1ST0
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BU of 1st0 by Molmil
Structure of DcpS bound to m7GpppG
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, YTTRIUM (III) ION, mRNA decapping enzyme
Authors:Gu, M, Fabrega, C, Liu, S.W, Liu, H, Kiledjian, M, Lima, C.D.
Deposit date:2004-03-24
Release date:2004-04-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into the structure, mechanism, and regulation of scavenger mRNA decapping activity
Mol.Cell, 14, 2004
1ST4
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BU of 1st4 by Molmil
Structure of DcpS bound to m7GpppA
Descriptor: P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, YTTRIUM (III) ION, mRNA decapping enzyme
Authors:Gu, M, Fabrega, C, Liu, S.W, Liu, H, Kiledjian, M, Lima, C.D.
Deposit date:2004-03-24
Release date:2004-04-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Insights into the structure, mechanism, and regulation of scavenger mRNA decapping activity
Mol.Cell, 14, 2004
1T35
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BU of 1t35 by Molmil
CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN YVDD- A PUTATIVE LYSINE DECARBOXYLASE
Descriptor: HYPOTHETICAL PROTEIN YVDD, Putative Lysine Decarboxylase, SULFATE ION
Authors:Rajashankar, K.R, Kniewel, R, Solorzano, V, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-04-23
Release date:2004-05-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Crystal Structure of a Hypothetical Protein Yvdd - Putative Lysine Decarboxylase
To be Published
1TGZ
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BU of 1tgz by Molmil
Structure of human Senp2 in complex with SUMO-1
Descriptor: SULFATE ION, Sentrin-specific protease 2, Ubiquitin-like protein SMT3C
Authors:Reverter, D, Lima, C.D.
Deposit date:2004-05-31
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A basis for SUMO protease specificity provided by analysis of human Senp2 and a Senp2-SUMO complex
Structure, 12, 2004
1TIK
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BU of 1tik by Molmil
CRYSTAL STRUCTURE OF ACYL CARRIER PROTEIN PHOSPHODIESTERASE
Descriptor: Acyl carrier protein phosphodiesterase, SULFATE ION
Authors:Rajashankar, K.R, Kniewel, R, Solorzano, V, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-02
Release date:2004-06-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:CRYSTAL STRUCTURE OF ACYL CARRIER PROTEIN PHOSPHODIESTERASE
To be Published
1TH0
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BU of 1th0 by Molmil
Structure of human Senp2
Descriptor: Sentrin-specific protease 2
Authors:Reverter, D, Lima, C.D.
Deposit date:2004-05-31
Release date:2004-09-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A basis for SUMO protease specificity provided by analysis of human Senp2 and a Senp2-SUMO complex
Structure, 12, 2004
1SZQ
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BU of 1szq by Molmil
Crystal Structure of 2-methylcitrate dehydratase
Descriptor: 2-methylcitrate dehydratase
Authors:Rajashankar, K.R, Kniewel, R, Solorzano, V, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-04-06
Release date:2004-04-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of 2-methylcitrate dehydratase
To be Published
1TLT
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Crystal Structure of a Putative Oxidoreductase (VIRULENCE FACTOR mviM HOMOLOG)
Descriptor: PUTATIVE OXIDOREDUCTASE (VIRULENCE FACTOR mviM HOMOLOG), SULFATE ION
Authors:Rajashankar, K.R, Solorzano, V, Kniewel, R, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-09
Release date:2004-06-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of a Putative Oxidoreductase (VIRULENCE FACTOR mviM HOMOLOG)
To be Published

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