Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 463 件

6NYF
DownloadVisualize
BU of 6nyf by Molmil
Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 1 (OA-1)
分子名称: Vacuolating cytotoxin autotransporter
著者Zhang, K, Zhang, H, Li, S, Au, S, Chiu, W.
登録日2019-02-11
公開日2019-03-27
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structures ofHelicobacter pylorivacuolating cytotoxin A oligomeric assemblies at near-atomic resolution.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
1H52
DownloadVisualize
BU of 1h52 by Molmil
Binding of Phosphate and Pyrophosphate ions at the active site of human Angiogenin as revealed by X-ray Crystallography
分子名称: ANGIOGENIN, PYROPHOSPHATE 2-
著者Leonidas, D.D, Chavali, G.B, Jardine, A.M, Li, S, Shapiro, R, Acharya, K.R.
登録日2001-05-18
公開日2001-08-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Binding of Phosphate and Pyrophosphate Ions at the Active Site of Human Angiogenin as Revealed by X-Ray Crystallography
Protein Sci., 10, 2001
5WSN
DownloadVisualize
BU of 5wsn by Molmil
Structure of Japanese encephalitis virus
分子名称: E protein, M protein
著者Wang, X, Zhu, L, Li, S, Yuan, S, Qin, C, Fry, E.E, Stuart, I.D, Rao, Z.
登録日2016-12-07
公開日2017-05-17
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Near-atomic structure of Japanese encephalitis virus reveals critical determinants of virulence and stability
Nat Commun, 8, 2017
6NYM
DownloadVisualize
BU of 6nym by Molmil
Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2d (OA-2d)
分子名称: Vacuolating cytotoxin autotransporter
著者Zhang, K, Zhang, H, Li, S, Au, S, Chiu, W.
登録日2019-02-11
公開日2019-03-27
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structures ofHelicobacter pylorivacuolating cytotoxin A oligomeric assemblies at near-atomic resolution.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6NYJ
DownloadVisualize
BU of 6nyj by Molmil
Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2b (OA-2b)
分子名称: Vacuolating cytotoxin autotransporter
著者Zhang, K, Zhang, H, Li, S, Au, S, Chiu, W.
登録日2019-02-11
公開日2019-03-27
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structures ofHelicobacter pylorivacuolating cytotoxin A oligomeric assemblies at near-atomic resolution.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6NYL
DownloadVisualize
BU of 6nyl by Molmil
Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2c (OA-2c)
分子名称: Vacuolating cytotoxin autotransporter
著者Zhang, K, Zhang, H, Li, S, Au, S, Chiu, W.
登録日2019-02-11
公開日2019-03-27
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structures ofHelicobacter pylorivacuolating cytotoxin A oligomeric assemblies at near-atomic resolution.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6NYN
DownloadVisualize
BU of 6nyn by Molmil
Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2e (OA-2e)
分子名称: Vacuolating cytotoxin autotransporter
著者Zhang, K, Zhang, H, Li, S, Au, S, Chiu, W.
登録日2019-02-11
公開日2019-03-27
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structures ofHelicobacter pylorivacuolating cytotoxin A oligomeric assemblies at near-atomic resolution.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
1WM3
DownloadVisualize
BU of 1wm3 by Molmil
Crystal structure of human SUMO-2 protein
分子名称: Ubiquitin-like protein SMT3B
著者Huang, W.-C, Ko, T.-P, Li, S.S.-L, Wang, A.H.-J.
登録日2004-07-02
公開日2004-11-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structures of the human SUMO-2 protein at 1.6 A and 1.2 A resolution: implication on the functional differences of SUMO proteins
Eur.J.Biochem., 271, 2004
1H53
DownloadVisualize
BU of 1h53 by Molmil
Binding of Phosphate and Pyrophosphate ions at the active site of human Angiogenin as revealed by X-ray Crystallography
分子名称: ANGIOGENIN, CITRIC ACID, PHOSPHATE ION
著者Leonidas, D.D, Chavali, G.B, Jardine, A.M, Li, S, Shapiro, R, Acharya, K.R.
登録日2001-05-18
公開日2001-08-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Binding of Phosphate and Pyrophosphate Ions at the Active Site of Human Angiogenin as Revealed by X-Ray Crystallography
Protein Sci., 10, 2001
1FNJ
DownloadVisualize
BU of 1fnj by Molmil
CRYSTAL STRUCTURE ANALYSIS OF CHORISMATE MUTASE MUTANT C88S/R90K
分子名称: PROTEIN (CHORISMATE MUTASE)
著者Kast, P, Grisostomi, C, Chen, I.A, Li, S, Krengel, U, Xue, Y, Hilvert, D.
登録日2000-08-22
公開日2000-10-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A strategically positioned cation is crucial for efficient catalysis by chorismate mutase.
J.Biol.Chem., 275, 2000
5D1M
DownloadVisualize
BU of 5d1m by Molmil
Crystal Structure of UbcH5B in Complex with the RING-U5BR Fragment of AO7 (P199A)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase RNF25, ...
著者Liang, Y.-H, Li, S, Weissman, A.M, Ji, X.
登録日2015-08-04
公開日2015-10-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.581 Å)
主引用文献Insights into Ubiquitination from the Unique Clamp-like Binding of the RING E3 AO7 to the E2 UbcH5B.
J.Biol.Chem., 290, 2015
1WM2
DownloadVisualize
BU of 1wm2 by Molmil
Crystal structure of human SUMO-2 protein
分子名称: Ubiquitin-like protein SMT3B
著者Huang, W.-C, Ko, T.-P, Li, S.S.-L, Wang, A.H.-J.
登録日2004-07-02
公開日2004-11-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of the human SUMO-2 protein at 1.6 A and 1.2 A resolution: implication on the functional differences of SUMO proteins
Eur.J.Biochem., 271, 2004
3UIU
DownloadVisualize
BU of 3uiu by Molmil
Crystal structure of Apo-PKR kinase domain
分子名称: Interferon-induced, double-stranded RNA-activated protein kinase
著者Li, F, Li, S, Yang, X, Shen, Y, Zhang, T.
登録日2011-11-06
公開日2012-11-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.903 Å)
主引用文献Crystal structure of Apo-PKR kinase domain
TO BE PUBLISHED
7K3V
DownloadVisualize
BU of 7k3v by Molmil
Apoferritin structure at 1.34 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with K3 detector
分子名称: Ferritin heavy chain, SODIUM ION, ZINC ION
著者Zhang, K, Pintilie, G, Li, S, Schmid, M, Chiu, W.
登録日2020-09-14
公開日2020-11-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (1.34 Å)
主引用文献Resolving individual atoms of protein complex by cryo-electron microscopy.
Cell Res., 30, 2020
1Q34
DownloadVisualize
BU of 1q34 by Molmil
Crystal structures of two UBC (E2) enzymes of the ubiquitin-conjugating system in Caenorhabditis elegans
分子名称: Ubiquitin-conjugating enzyme E2-21.5 kDa
著者Schormann, N, Lin, G, Li, S, Symersky, J, Qiu, S, Finley, J, Luo, D, Stanton, A, Carson, M, Luo, M, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2003-07-28
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of two UBC (E2) enzymes of the ubiquitin-conjugating system in Caenorhabditis elegans
To be Published
7K3W
DownloadVisualize
BU of 7k3w by Molmil
Apoferritin structure at 1.36 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with Falcon4 detector
分子名称: Ferritin heavy chain, SODIUM ION, ZINC ION
著者Zhang, K, Pintilie, G, Li, S, Schmid, M, Chiu, W.
登録日2020-09-14
公開日2020-11-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (1.36 Å)
主引用文献Resolving individual atoms of protein complex by cryo-electron microscopy.
Cell Res., 30, 2020
1FNK
DownloadVisualize
BU of 1fnk by Molmil
CRYSTAL STRUCTURE ANALYSIS OF CHORISMATE MUTASE MUTANT C88K/R90S
分子名称: PROTEIN (CHORISMATE MUTASE)
著者Kast, P, Grisostomi, C, Chen, I.A, Li, S, Krengel, U, Xue, Y, Hilvert, D.
登録日2000-08-22
公開日2000-10-11
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A strategically positioned cation is crucial for efficient catalysis by chorismate mutase.
J.Biol.Chem., 275, 2000
1OOJ
DownloadVisualize
BU of 1ooj by Molmil
Structural genomics of Caenorhabditis elegans : Calmodulin
分子名称: CALCIUM ION, Calmodulin CMD-1
著者Symersky, J, Lin, G, Li, S, Qiu, S, Luan, C.-H, Luo, D, Tsao, J, Carson, M, DeLucas, L, Luo, M, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2003-03-03
公開日2003-03-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structural genomics of caenorhabditis elegans: crystal structure of calmodulin.
Proteins, 53, 2003
6VQV
DownloadVisualize
BU of 6vqv by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF9
分子名称: AcrF9, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
著者Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
登録日2020-02-06
公開日2020-03-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VQX
DownloadVisualize
BU of 6vqx by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF6
分子名称: AcrF6, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
著者Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
登録日2020-02-06
公開日2020-03-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
7PVN
DownloadVisualize
BU of 7pvn by Molmil
Crystal Structure of Human UBA6 in Complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Truongvan, N, Li, S, Schindelin, H.
登録日2021-10-05
公開日2022-08-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structures of UBA6 explain its dual specificity for ubiquitin and FAT10.
Nat Commun, 13, 2022
4WVR
DownloadVisualize
BU of 4wvr by Molmil
Crystal structure of Dscam1 Ig7 domain, isoform 5
分子名称: Down syndrome cell adhesion molecule, isoform AK
著者Chen, Q, Yu, Y, Li, S, Cheng, L.
登録日2014-11-07
公開日2015-11-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.948 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
7R7S
DownloadVisualize
BU of 7r7s by Molmil
p47-bound p97-R155H mutant with ATPgammaS
分子名称: NSFL1 cofactor p47, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Nandi, P, Li, S, Coulmbres, R.C.A, Wang, F, Williams, D.R, Malyutin, A.G, Poh, Y.-P, Chou, T.-F, Chiu, P.-L.
登録日2021-06-25
公開日2021-08-04
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.23 Å)
主引用文献Structural and Functional Analysis of Disease-Linked p97 ATPase Mutant Complexes.
Int J Mol Sci, 22, 2021
7R7T
DownloadVisualize
BU of 7r7t by Molmil
p47-bound p97-R155H mutant with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, NSFL1 cofactor p47, Transitional endoplasmic reticulum ATPase
著者Nandi, P, Li, S, Coulmbres, R.C.A, Wang, F, Williams, D.R, Malyutin, A.G, Poh, Y.-P, Chou, T.-F, Chiu, P.-L.
登録日2021-06-25
公開日2021-08-04
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural and Functional Analysis of Disease-Linked p97 ATPase Mutant Complexes.
Int J Mol Sci, 22, 2021
7R7U
DownloadVisualize
BU of 7r7u by Molmil
D1 and D2 domain structure of the p97(R155H)-p47 complex
分子名称: Transitional endoplasmic reticulum ATPase
著者Nandi, P, Li, S, Coulmbres, R.C.A, Wang, F, Williams, D.R, Poh, Y.-P, Chou, T.-F, Chiu, P.-L.
登録日2021-06-25
公開日2021-08-04
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural and Functional Analysis of Disease-Linked p97 ATPase Mutant Complexes.
Int J Mol Sci, 22, 2021

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon