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PDB: 954 件

8Y2T
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Crystal structure of 3C protease from coxsackievirus B3
分子名称: Protease 3C
著者Jiang, H.H, Zou, X.F, Zhang, J, Li, J.
登録日2024-01-27
公開日2024-08-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of the 3C proteases from Coxsackievirus B3 and B4.
Acta Crystallogr.,Sect.F, 80, 2024
8HQH
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Crystal structure of SARS-Cov-2 main protease M49I mutant in complex with inhibitor YH-53
分子名称: 3C-like proteinase nsp5, N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide
著者Zou, X.F, Zhang, J, Li, J.
登録日2022-12-13
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structure of SARS-Cov-2 main protease M49I mutant in complex with inhibitor YH-53
To Be Published
8Y2U
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Crystal structure of 3C protease from coxsackievirus B4
分子名称: Protease 3C
著者Jiang, H.H, Lin, C, Zhang, J, Li, J.
登録日2024-01-27
公開日2024-08-14
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structures of the 3C proteases from Coxsackievirus B3 and B4.
Acta Crystallogr.,Sect.F, 80, 2024
8HQJ
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Crystal structure of SARS-Cov-2 main protease Y54C mutant in complex with inhibitor YH-53
分子名称: 3C-like proteinase nsp5, N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide
著者Zhou, X.L, Zhang, J, Li, J.
登録日2022-12-13
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structure of SARS-Cov-2 main protease Y54C mutant in complex with inhibitor YH-53
To Be Published
5GSK
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Crystal structure of duplex DNA3 in complex with Hg(II) and Sr(II)
分子名称: DNA (5'-D(*GP*GP*TP*CP*GP*TP*CP*C)-3'), MERCURY (II) ION, STRONTIUM ION
著者Liu, H.H, Wang, R, Yao, Q.Q, Cheng, Y.Q, Yang, C, Luo, Q, Wu, B.X, Li, J.X, Ma, J.B, Sheng, J, Gan, J.H.
登録日2016-08-16
公開日2017-02-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Flexibility and stabilization of HgII-mediated C:T and T:T base pairs in DNA duplex
Nucleic Acids Res., 45, 2017
7MHR
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KcsA E71V closed gate with K+
分子名称: Fab heavy chain, Fab light chain, POTASSIUM ION, ...
著者Rohaim, A, Li, J, Weingarth, M, Roux, B.
登録日2021-04-15
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
7MHX
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KcsA E71V closed gate with Ba2+
分子名称: BARIUM ION, DIACYL GLYCEROL, Fab heavy chain, ...
著者Rohaim, A, Li, J, Weingarth, M, Roux, B.
登録日2021-04-15
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
7MUB
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KcsA Open gate E71V mutant in Potassium
分子名称: Fab heavy chain, Fab light chain, POTASSIUM ION, ...
著者Rohaim, A, Li, J, Weingarth, M, Roux, B.
登録日2021-05-14
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
7MK6
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KcsA open gate E71V mutant with sodium
分子名称: Fab heavy chain, Fab light chain, pH-gated potassium channel KcsA
著者Rohaim, A, Li, J, Weingarth, M, Roux, B.
登録日2021-04-21
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
7MJT
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KcsA open gate E71V mutant with Barium
分子名称: BARIUM ION, Fab heavy chain, Fab light chain, ...
著者Rohaim, A, Li, J, Weingarth, M, Roux, B.
登録日2021-04-20
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
4N6F
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Crystal structure of Amycolatopsis orientalis BexX complexed with G6P
分子名称: CALCIUM ION, FRUCTOSE -6-PHOSPHATE, Putative thiosugar synthase
著者Zhang, X, Zhang, Y, Kinsland, C, Sasaki, E, Sun, H.G, Lu, M.J, Liu, T, Ou, A, Li, J, Chen, Y, Liu, H, Ealick, S.E.
登録日2013-10-11
公開日2014-05-14
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Co-opting sulphur-carrier proteins from primary metabolic pathways for 2-thiosugar biosynthesis.
Nature, 509, 2014
4FWV
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Crystal structure of the N-terminal domain of the Lon-like protease MtaLonC
分子名称: SULFATE ION, TTC1975 peptidase
著者Chang, C.I, Li, J.K, Kuo, C.I, Huang, K.F.
登録日2012-07-02
公開日2013-06-26
最終更新日2014-03-12
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The N-terminal substrate-recognition domain of a LonC protease exhibits structural and functional similarity to cytosolic chaperones
Acta Crystallogr.,Sect.D, 69, 2013
3WWE
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The complex of pOPH with PEG
分子名称: 2-(2-ETHOXYETHOXY)ETHANOL, Oxidized polyvinyl alcohol hydrolase
著者Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chen, J, Guo, R.T, Du, G.C.
登録日2014-06-17
公開日2015-04-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Roles of tryptophan residue and disulfide bond in the variable lid region of oxidized polyvinyl alcohol hydrolase
Biochem.Biophys.Res.Commun., 452, 2014
3WWD
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The complex of pOPH_S172C with DMSO
分子名称: CITRIC ACID, DIMETHYL SULFOXIDE, Oxidized polyvinyl alcohol hydrolase
著者Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chen, J, Guo, R.T, Du, G.C.
登録日2014-06-17
公開日2015-04-29
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Roles of tryptophan residue and disulfide bond in the variable lid region of oxidized polyvinyl alcohol hydrolase
Biochem.Biophys.Res.Commun., 452, 2014
3WWC
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The complex of pOPH_S172A of pNPB
分子名称: CITRIC ACID, Oxidized polyvinyl alcohol hydrolase, butanoic acid
著者Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chen, J, Guo, R.T, Du, G.C.
登録日2014-06-17
公開日2015-04-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Roles of tryptophan residue and disulfide bond in the variable lid region of oxidized polyvinyl alcohol hydrolase
Biochem.Biophys.Res.Commun., 452, 2014
1TR4
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Solution structure of human oncogenic protein gankyrin
分子名称: 26S proteasome non-ATPase regulatory subunit 10
著者Yuan, C, Li, J, Mahajan, A, Poi, M.J, Byeon, I.J, Tsai, M.D.
登録日2004-06-19
公開日2004-11-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the human oncogenic protein gankyrin containing seven ankyrin repeats and analysis of its structure--function relationship.
Biochemistry, 43, 2004
8HVM
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Crystal structure of SARS-Cov-2 main protease K90R mutant in complex with PF07321332
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
著者Wang, J, Zhang, J, Li, J.
登録日2022-12-27
公開日2023-12-27
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal structure of SARS-Cov-2 main protease K90R mutant in complex with PF07321332
To Be Published
8FV5
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Representation of 16-mer phiPA3 PhuN Lattice, p2
分子名称: Maltose/maltodextrin-binding periplasmic protein, phiPA3 PhuN
著者Nieweglowska, E.S, Brilot, A.F, Mendez-Moran, M, Kokontis, C, Baek, M, Li, J, Cheng, Y, Baker, D, Bondy-Denomy, J, Agard, D.A.
登録日2023-01-18
公開日2023-03-01
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.21 Å)
主引用文献The phi PA3 phage nucleus is enclosed by a self-assembling 2D crystalline lattice.
Nat Commun, 14, 2023
8HVY
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Crystal structure of SARS-Cov-2 main protease K90R mutant in complex with PF07304814
分子名称: 3C-like proteinase nsp5, [(3~{S})-3-[[(2~{S})-2-[(4-methoxy-1~{H}-indol-2-yl)carbonylamino]-4-methyl-pentanoyl]amino]-2-oxidanylidene-4-[(3~{R})-2-oxidanylidene-3,4-dihydropyrrol-3-yl]butyl] dihydrogen phosphate
著者Wang, J, Zhang, J, Li, J.
登録日2022-12-28
公開日2024-01-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structures of main protease (M pro ) mutants of SARS-CoV-2 variants bound to PF-07304814.
Mol Biomed, 4, 2023
8FIA
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The structure of fly Teneurin self assembly
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Bandekar, S.J, Li, J, Arac, D.
登録日2022-12-15
公開日2023-05-03
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of fly Teneurin-m reveals an asymmetric self-assembly that allows expansion into zippers.
Embo Rep., 24, 2023
7FAJ
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CARM1 bound with compound 43
分子名称: Histone-arginine methyltransferase CARM1, N'-[[3-[4-(3,5-dimethyl-1,2-oxazol-4-yl)-5-methyl-6-phenylazanyl-pyrimidin-2-yl]phenyl]methyl]-N-methyl-ethane-1,2-diamine
著者Cao, D.Y, Li, J, Xiong, B.
登録日2021-07-06
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2450726 Å)
主引用文献Structure-Based Discovery of Potent CARM1 Inhibitors for Solid Tumor and Cancer Immunology Therapy.
J.Med.Chem., 64, 2021
7FAI
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CARM1 bound with compound 9
分子名称: Histone-arginine methyltransferase CARM1, N'-[[3-[4-(3,5-dimethyl-1,2-oxazol-4-yl)-5-methyl-6-(oxan-4-ylamino)pyrimidin-2-yl]phenyl]methyl]-N-methyl-ethane-1,2-diamine
著者Cao, D.Y, Li, J, Xiong, B.
登録日2021-07-06
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.09749269 Å)
主引用文献Structure-Based Discovery of Potent CARM1 Inhibitors for Solid Tumor and Cancer Immunology Therapy.
J.Med.Chem., 64, 2021
7FB5
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Crystal structure of FAM134B/GABARAP complex
分子名称: Gamma-aminobutyric acid receptor-associated protein, Reticulophagy regulator 1
著者Zhao, J, Li, J.
登録日2021-07-08
公開日2022-03-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献The crystal structure of the FAM134B-GABARAP complex provides mechanistic insights into the selective binding of FAM134 to the GABARAP subfamily.
Febs Open Bio, 12, 2022
3PDX
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Crystal structural of mouse tyrosine aminotransferase
分子名称: Tyrosine aminotransferase
著者Mehere, P.V, Han, Q, Lemkul, J.A, Robinson, H, Bevan, D.R, Li, J.
登録日2010-10-25
公開日2010-11-03
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Tyrosine aminotransferase: biochemical and structural properties and molecular dynamics simulations.
Protein Cell, 1, 2010
6KEU
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Wildtype E53, a microbial HSL esterase
分子名称: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, GLYCEROL, ...
著者Yang, X.C, Li, Z.Y, Xu, X.W, Li, J.X.
登録日2019-07-05
公開日2020-07-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Wildtype E53, a microbial HSL esterase
To Be Published

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件を2024-08-28に公開中

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