5W5E
 
 | | Re-refinement of the pyocin tube structure | | Descriptor: | FIIR2 protein | | Authors: | Wang, F, Zheng, W, Taylor, N.M, Guerrero-Ferreira, R.C, Leiman, P.G, Egelman, E.H. | | Deposit date: | 2017-06-15 | | Release date: | 2017-08-16 | | Last modified: | 2024-03-13 | | Method: | ELECTRON MICROSCOPY (3.5 Å) | | Cite: | Refined Cryo-EM Structure of the T4 Tail Tube: Exploring the Lowest Dose Limit.
Structure, 25, 2017
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2BSG
 | | The modeled structure of fibritin (gpwac) of bacteriophage T4 based on cryo-EM reconstruction of the extended tail of bacteriophage T4 | | Descriptor: | FIBRITIN | | Authors: | Kostyuchenko, V.A, Chipman, P.R, Leiman, P.G, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G. | | Deposit date: | 2005-05-20 | | Release date: | 2005-09-21 | | Last modified: | 2024-05-08 | | Method: | ELECTRON MICROSCOPY (15 Å) | | Cite: | The Tail Structure of Bacteriophage T4 and its Mechanism of Contraction.
Nat.Struct.Mol.Biol., 12, 2005
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1FOQ
 | | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | | Descriptor: | BACTERIOPHAGE PHI29 PROHEAD RNA | | Authors: | Simpson, A.A, Tao, Y, Leiman, P.G, Badasso, M.O, He, Y, Jardine, P.J, Olson, N.H, Morais, M.C, Grimes, S, Anderson, D.L, Baker, T.S, Rossmann, M.G. | | Deposit date: | 2000-08-28 | | Release date: | 2000-12-22 | | Last modified: | 2024-02-07 | | Method: | ELECTRON MICROSCOPY (20 Å) | | Cite: | Structure of the bacteriophage phi29 DNA packaging motor.
Nature, 408, 2000
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1FOU
 | | CONNECTOR PROTEIN FROM BACTERIOPHAGE PHI29 | | Descriptor: | UPPER COLLAR PROTEIN | | Authors: | Simpson, A.A, Tao, Y, Leiman, P.G, Badasso, M.O, He, Y, Jardine, P.J, Olson, N.H, Morais, M.C, Grimes, S.N, Anderson, D.L, Baker, T.S, Rossmann, M.G. | | Deposit date: | 2000-08-28 | | Release date: | 2000-12-22 | | Last modified: | 2024-02-07 | | Method: | X-RAY DIFFRACTION (3.2 Å) | | Cite: | Structure of the bacteriophage phi29 DNA packaging motor.
Nature, 408, 2000
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1IJG
 | | Structure of the Bacteriophage phi29 Head-Tail Connector Protein | | Descriptor: | UPPER COLLAR PROTEIN | | Authors: | Simpson, A.A, Leiman, P.G, Tao, Y, He, Y, Badasso, M, Jardine, P.J, Anderson, D.L, Rossmann, M.G. | | Deposit date: | 2001-04-26 | | Release date: | 2001-05-09 | | Last modified: | 2023-08-16 | | Method: | X-RAY DIFFRACTION (2.9 Å) | | Cite: | Structure determination of the head-tail connector of bacteriophage phi29.
Acta Crystallogr.,Sect.D, 57, 2001
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1K28
 | | The Structure of the Bacteriophage T4 Cell-Puncturing Device | | Descriptor: | BASEPLATE STRUCTURAL PROTEIN GP27, PHOSPHATE ION, POTASSIUM ION, ... | | Authors: | Kanamaru, S, Leiman, P.G, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Arisaka, F, Rossmann, M.G. | | Deposit date: | 2001-09-26 | | Release date: | 2002-02-06 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.9 Å) | | Cite: | Structure of the cell-puncturing device of bacteriophage T4.
Nature, 415, 2002
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3FO8
 | | Crystal structure of the bacteriophage T4 tail sheath protein, protease resistant fragment gp18PR | | Descriptor: | ACETATE ION, Tail sheath protein Gp18 | | Authors: | Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G. | | Deposit date: | 2008-12-29 | | Release date: | 2009-03-10 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
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3FOI
 | | Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 contracted tail | | Descriptor: | Tail sheath protein Gp18 | | Authors: | Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G. | | Deposit date: | 2008-12-30 | | Release date: | 2009-03-10 | | Last modified: | 2024-02-21 | | Method: | ELECTRON MICROSCOPY (16 Å) | | Cite: | The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
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3FOA
 | | Crystal structure of the bacteriophage T4 tail sheath protein, deletion mutant gp18M | | Descriptor: | Tail sheath protein Gp18 | | Authors: | Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G. | | Deposit date: | 2008-12-29 | | Release date: | 2009-03-10 | | Last modified: | 2023-09-06 | | Method: | X-RAY DIFFRACTION (3.5 Å) | | Cite: | The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
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3FOH
 | | Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 extended tail | | Descriptor: | Tail sheath protein Gp18 | | Authors: | Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G. | | Deposit date: | 2008-12-30 | | Release date: | 2009-03-10 | | Last modified: | 2024-02-21 | | Method: | ELECTRON MICROSCOPY (15 Å) | | Cite: | The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
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6PYT
 | | CryoEM Structure of Pyocin R2 - precontracted - trunk | | Descriptor: | Pyocin sheath PA0622, Pyocin tube PA0623 | | Authors: | Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H. | | Deposit date: | 2019-07-30 | | Release date: | 2020-04-15 | | Last modified: | 2024-03-20 | | Method: | ELECTRON MICROSCOPY (2.9 Å) | | Cite: | Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
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4JJ2
 | | High resolution structure of a C-terminal fragment of the T4 phage gp5 beta-helix | | Descriptor: | 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ... | | Authors: | Buth, S.A, Leiman, P.G, Boudko, S.P. | | Deposit date: | 2013-03-07 | | Release date: | 2014-03-12 | | Last modified: | 2024-05-29 | | Method: | X-RAY DIFFRACTION (1.28 Å) | | Cite: | Structure and Biophysical Properties of a Triple-Stranded Beta-Helix Comprising the Central Spike of Bacteriophage T4.
Viruses, 7, 2015
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4KU0
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4JK6
 | | Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Aba) | | Descriptor: | 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ... | | Authors: | Buth, S.A, Leiman, P.G, Chen, S, Heinis, C. | | Deposit date: | 2013-03-09 | | Release date: | 2013-07-17 | | Last modified: | 2024-07-10 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids.
Chembiochem, 14, 2013
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4JIW
 | | c1882 PAAR-repeat protein from Escherichia coli in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5 | | Descriptor: | CHLORIDE ION, MAGNESIUM ION, Putative uncharacterized protein, ... | | Authors: | Buth, S.A, Leiman, P.G, Shneider, M.M. | | Deposit date: | 2013-03-07 | | Release date: | 2013-08-14 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (3.402 Å) | | Cite: | PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
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4JK5
 | | Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Ser) | | Descriptor: | 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ... | | Authors: | Buth, S.A, Leiman, P.G, Chen, S, Heinis, C. | | Deposit date: | 2013-03-09 | | Release date: | 2013-07-17 | | Last modified: | 2023-09-20 | | Method: | X-RAY DIFFRACTION (1.55 Å) | | Cite: | Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids.
Chembiochem, 14, 2013
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4JIV
 | | VCA0105 PAAR-repeat protein from Vibrio cholerae in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5 | | Descriptor: | 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ... | | Authors: | Buth, S.A, Leiman, P.G, Shneider, M.M. | | Deposit date: | 2013-03-07 | | Release date: | 2013-08-14 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (1.903 Å) | | Cite: | PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
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3PQI
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3QR8
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3QR7
 | | Crystal structure of the C-terminal fragment of the bacteriophage P2 membrane-piercing protein gpV | | Descriptor: | Baseplate assembly protein V, CALCIUM ION, CHLORIDE ION, ... | | Authors: | Browning, C, Shneider, M, Leiman, P.G. | | Deposit date: | 2011-02-17 | | Release date: | 2012-02-22 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (0.94 Å) | | Cite: | Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
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3PQH
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4RU4
 | | Crystal structure of the tailspike protein gp49 from Pseudomonas phage LKA1 | | Descriptor: | 1,2-ETHANEDIOL, CALCIUM ION, SODIUM ION, ... | | Authors: | Browning, C, Shneider, M.M, Leiman, P.G. | | Deposit date: | 2014-11-18 | | Release date: | 2015-11-18 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (1.903 Å) | | Cite: | The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.
Sci Rep, 7, 2017
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4RU5
 | | Crystal Structure of the Pseudomonas phage phi297 tailspike gp61 | | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ... | | Authors: | Browning, C, Sycheva, L.V, Shneider, M.M, Leiman, P.G. | | Deposit date: | 2014-11-18 | | Release date: | 2015-11-18 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (1.52 Å) | | Cite: | The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.
Sci Rep, 7, 2017
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4S36
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4RU3
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