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PDB: 31 件

8HMW
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Double methyl modification on guanosine promotes unusual structural distortion and conformational transition in Z-DNA
分子名称: DNA (5'-D(*CP*GP*CP*(SJO)P*CP*G)-3')
著者Lee, J.-H, Oh, K.-I.
登録日2022-12-06
公開日2023-04-26
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Entropy-driven conformational transition of flexible Z-DNA to a novel non-B helix by double-methylated guanosine
J Mol Liq, 2023
1CFL
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DNA DECAMER DUPLEX CONTAINING T5-T6 PHOTOADDUCT
分子名称: DNA (5'-D(*CP*GP*CP*AP*(64T)P*TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3')
著者Lee, J.-H, Hwang, G.-S, Choi, B.-S.
登録日1999-03-19
公開日1999-05-28
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of a DNA decamer duplex containing the stable 3' T.G base pair of the pyrimidine(6-4)pyrimidone photoproduct [(6-4) adduct]: implications for the highly specific 3' T --> C transition of the (6-4) adduct.
Proc.Natl.Acad.Sci.USA, 96, 1999
8OM5
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DNA-free open form of MutSbeta
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ...
著者Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
登録日2023-03-31
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献DNA-free open form of MutSbeta
To Be Published
8OMQ
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DNA-unbound MutSbeta-ATP complex (straight clamp form)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ...
著者Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
登録日2023-03-31
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献DNA-unbound MutSbeta-ATP complex (straight clamp form)
To Be Published
8OMO
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DNA-unbound MutSbeta-ATP complex (bent clamp form)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ...
著者Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
登録日2023-03-31
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献DNA-unbound MutSbeta-ATP complex (bent clamp form)
To Be Published
8OLX
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MutSbeta bound to (CAG)2 DNA (canonical form)
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (25-MER), DNA mismatch repair protein Msh2, ...
著者Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
登録日2023-03-30
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献MutSbeta bound to (CAG)2 DNA (canonical form)
To Be Published
8OMA
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MutSbeta bound to 61bp homoduplex DNA
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ...
著者Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
登録日2023-03-31
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献MutSbeta bound to 61bp homoduplex DNA
To Be Published
8OM9
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MutSbeta bound to (CAG)2 DNA (open form)
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ...
著者Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
登録日2023-03-31
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献MutSbeta bound to (CAG)2 DNA (open form)
To Be Published
6Z6F
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HDAC-PC
分子名称: HDA1 complex subunit 2, HDA1 complex subunit 3,HDA1 complex subunit 3, Histone deacetylase HDA1, ...
著者Lee, J.-H, Bollschweiler, D, Schaefer, T, Huber, R.
登録日2020-05-28
公開日2021-02-17
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Structural basis for the regulation of nucleosome recognition and HDAC activity by histone deacetylase assemblies.
Sci Adv, 7, 2021
6Z6H
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HDAC-DC
分子名称: HDA1 complex subunit 2, HDA1 complex subunit 3,HDA1 complex subunit 3, Histone deacetylase HDA1, ...
著者Lee, J.-H, Bollschweiler, D, Schaefer, T, Huber, R.
登録日2020-05-28
公開日2021-02-17
実験手法ELECTRON MICROSCOPY (8.55 Å)
主引用文献Structural basis for the regulation of nucleosome recognition and HDAC activity by histone deacetylase assemblies.
Sci Adv, 7, 2021
6Z6P
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HDAC-PC-Nuc
分子名称: DNA (145-MER), HDA1 complex subunit 2, HDA1 complex subunit 3,HDA1 complex subunit 3, ...
著者Lee, J.-H, Bollschweiler, D, Schaefer, T, Huber, R.
登録日2020-05-28
公開日2021-02-17
実験手法ELECTRON MICROSCOPY (4.43 Å)
主引用文献Structural basis for the regulation of nucleosome recognition and HDAC activity by histone deacetylase assemblies.
Sci Adv, 7, 2021
6Z6O
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HDAC-TC
分子名称: HDA1 complex subunit 2, HDA1 complex subunit 3,HDA1 complex subunit 3, Histone deacetylase HDA1, ...
著者Lee, J.-H, Bollschweiler, D, Schaefer, T, Huber, R.
登録日2020-05-28
公開日2021-02-17
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis for the regulation of nucleosome recognition and HDAC activity by histone deacetylase assemblies.
Sci Adv, 7, 2021
1QL5
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BU of 1ql5 by Molmil
DNA DECAMER DUPLEX CONTAINING T5-T6 PHOTOADDUCT
分子名称: DNA (5'-D(*CP*GP*CP*AP*TP*+TP*AP*CP*GP*C)- 3'), DNA (5'-D(*GP*CP*GP*TP*TP*AP*TP*GP*CP*G)-3')
著者Lee, J.-H, Hwang, G.-S, Choi, B.-S.
登録日1999-08-24
公開日2000-04-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of a DNA Decamer Duplex Containing the 3' T.T Base Pair of the Cis-Syn Cyclobutane Pyrimidine Dimer: Implication for the Mutagenic Property of the Cis-Syn Dimer.
Nucleic Acids Res., 28, 2000
1QKG
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DNA DECAMER DUPLEX CONTAINING T-T DEWAR PHOTOPRODUCT
分子名称: DNA (5'-D(*CP*GP*CP*AP*(HYD)TP*+TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3')
著者Lee, J.-H, Bae, S.-H, Choi, Y.-J, Choi, B.-S.
登録日1999-07-20
公開日2000-05-11
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The Dewar Photoproduct of Thymidylyl(3'-->5')-Thymidine (Dewar Product) Exhibits Mutagenic Behavior in Accordance with the "A Rule".
Proc.Natl.Acad.Sci.USA, 97, 2000
4OWI
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peptide structure
分子名称: p53LZ2
著者Lee, J.-H.
登録日2014-02-02
公開日2014-05-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.202 Å)
主引用文献Protein grafting of p53TAD onto a leucine zipper scaffold generates a potent HDM dual inhibitor.
Nat Commun, 5, 2014
1X3Z
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Structure of a peptide:N-glycanase-Rad23 complex
分子名称: UV excision repair protein RAD23, ZINC ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, ...
著者Lee, J.-H, Choi, J.M, Lee, C, Yi, K.J, Cho, Y.
登録日2005-05-11
公開日2005-06-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of a peptide:N-glycanase-Rad23 complex: insight into the deglycosylation for denatured glycoproteins.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1X3W
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Structure of a peptide:N-glycanase-Rad23 complex
分子名称: UV excision repair protein RAD23, ZINC ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, ...
著者Lee, J.-H, Choi, J.M, Lee, C, Yi, K.J, Cho, Y.
登録日2005-05-11
公開日2005-06-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of a peptide:N-glycanase-Rad23 complex: insight into the deglycosylation for denatured glycoproteins.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4LCT
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BU of 4lct by Molmil
Crystal Structure and Versatile Functional Roles of the COP9 Signalosome Subunit 1
分子名称: COP9 signalosome complex subunit 1, SULFATE ION
著者Lee, J.-H, Yi, L, Li, J, Schweitzer, K, Borgmann, M, Naumann, M, Wu, H.
登録日2013-06-23
公開日2013-07-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure and versatile functional roles of the COP9 signalosome subunit 1.
Proc.Natl.Acad.Sci.USA, 110, 2013
4XCS
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Human peroxiredoxin-1 C83S mutant
分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, GLYCEROL, Peroxiredoxin-1
著者Cho, K.J, Lee, J.-H, Khan, T.G, Park, Y, Cho, A, Chang, T.-S, Kim, K.H.
登録日2014-12-18
公開日2016-01-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Dimeric Human Peroxiredoxin-1 C83S Mutant
Bull.Korean Chem.Soc., 36, 2015
4LVH
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Insight into highly conserved H1 subtype-specific epitopes in influenza virus hemagglutinin
分子名称: CALCIUM ION, Hemagglutinin, MONOCLONAL ANTIBODY H-CHAIN, ...
著者Kim, K.H, Cho, K.J, Kim, S, Seok, J.H, Lee, J.-H.
登録日2013-07-26
公開日2014-04-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Insight into highly conserved h1 subtype-specific epitopes in influenza virus hemagglutinin
Plos One, 9, 2014
5Y3D
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Structural insight into the interaction between RNA polymerase and VPg for norovirus replication
分子名称: RNA-dependent RNA polymerase, viral protein genome-linked (VPg)
著者Kim, K.H, Lee, J.-H, Seok, J.H.
登録日2017-07-28
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Insight Into the Interaction Between RNA Polymerase and VPg for Murine Norovirus Replication.
Front Microbiol, 9, 2018
1MNL
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HIGH-RESOLUTION SOLUTION STRUCTURE OF A SWEET PROTEIN SINGLE-CHAIN MONELLIN (SCM) DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND DYNAMICAL SIMULATED ANNEALING CALCULATIONS, 21 STRUCTURES
分子名称: MONELLIN
著者Lee, S.-Y, Lee, J.-H, Chang, H.-J, Jo, J.-M, Jung, J.-W, Lee, W.
登録日1998-08-06
公開日1999-06-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a sweet protein single-chain monellin determined by nuclear magnetic resonance and dynamical simulated annealing calculations.
Biochemistry, 38, 1999
4ES0
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BU of 4es0 by Molmil
X-ray structure of WDR5-SETd1b Win motif peptide binary complex
分子名称: Histone-lysine N-methyltransferase SETD1B, WD repeat-containing protein 5
著者Dharmarajan, V, Lee, J.-H, Patel, A, Skalnik, D.G, Cosgrove, M.S.
登録日2012-04-21
公開日2012-05-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.817 Å)
主引用文献Structural basis for WDR5 interaction (Win) motif recognition in human SET1 family histone methyltransferases.
J.Biol.Chem., 287, 2012
4ERZ
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X-ray structure of WDR5-MLL4 Win motif peptide binary complex
分子名称: Histone-lysine N-methyltransferase MLL4, WD repeat-containing protein 5
著者Dharmarajan, V, Lee, J.-H, Patel, A, Skalnik, D.G, Cosgrove, M.S.
登録日2012-04-21
公開日2012-05-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for WDR5 interaction (Win) motif recognition in human SET1 family histone methyltransferases.
J.Biol.Chem., 287, 2012
4EWR
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X-ray structure of WDR5-SETd1a Win motif peptide binary complex
分子名称: Histone-lysine N-methyltransferase SETD1A, WD repeat-containing protein 5
著者Dharmarajan, V, Lee, J.-H, Patel, A, Skalnik, D.G, Cosgrove, M.S.
登録日2012-04-27
公開日2012-05-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.503 Å)
主引用文献Structural basis for WDR5 interaction (Win) motif recognition in human SET1 family histone methyltransferases.
J.Biol.Chem., 287, 2012

 

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