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PDB: 128 件

7D5D
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Left-handed G-quadruplex containing one bulge
分子名称: 1xBulge-LHG4motif, POTASSIUM ION, SPERMINE
著者Das, P, Ngo, K.H, Winnerdy, F.R, Maity, A, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
登録日2020-09-25
公開日2021-02-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
7D5E
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Left-handed G-quadruplex containing two bulges
分子名称: 2xBulge-LHG4motif, POTASSIUM ION, SODIUM ION, ...
著者Das, P, Maity, A, Ngo, K.H, Winnerdy, F.R, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
登録日2020-09-25
公開日2021-02-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.296 Å)
主引用文献Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
7DFY
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Novel motif for left-handed G-quadruplex formation
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2xMotif2, POTASSIUM ION, ...
著者Das, P, Winnerdy, F.R, Maity, A, Mechulam, Y, Phan, A.T.
登録日2020-11-10
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献A novel minimal motif for left-handed G-quadruplex formation.
Chem.Commun.(Camb.), 57, 2021
7D5F
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Left-handed G-quadruplex containing 3 bulges
分子名称: 3xBulge-LHG4motif
著者Winnerdy, F.R, Das, P, Ngo, K.H, Maity, A, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
登録日2020-09-25
公開日2021-02-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
1XTY
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BU of 1xty by Molmil
Crystal structure of Sulfolobus solfataricus peptidyl-tRNA hydrolase
分子名称: Peptidyl-tRNA hydrolase, SULFATE ION
著者Fromant, M, Schmitt, E, Mechulam, Y, Lazennec, C, Plateau, P, Blanquet, S.
登録日2004-10-25
公開日2005-03-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure at 1.8 A resolution and identification of active site residues of Sulfolobus solfataricus peptidyl-tRNA hydrolase.
Biochemistry, 44, 2005
1YZ6
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Crystal structure of intact alpha subunit of aIF2 from Pyrococcus abyssi
分子名称: Probable translation initiation factor 2 alpha subunit
著者Yatime, L, Schmitt, E, Blanquet, S, Mechulam, Y.
登録日2005-02-28
公開日2005-06-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.37 Å)
主引用文献Structure-Function Relationships of the Intact aIF2alpha Subunit from the Archaeon Pyrococcus abyssi
Biochemistry, 44, 2005
2FMT
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METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET
分子名称: FORMYL-METHIONYL-TRNAFMET2, MAGNESIUM ION, METHIONYL-TRNA FMET FORMYLTRANSFERASE, ...
著者Schmitt, E, Mechulam, Y, Blanquet, S.
登録日1998-07-29
公開日1999-07-29
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of methionyl-tRNAfMet transformylase complexed with the initiator formyl-methionyl-tRNAfMet.
EMBO J., 17, 1998
7ZKI
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Cryo-EM structure of aIF1A:aIF5B:Met-tRNAiMet complex from a Pyrococcus abyssi 30S initiation complex
分子名称: MAGNESIUM ION, METHIONINE, Met-tRNAiMet, ...
著者Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R.
登録日2022-04-13
公開日2022-07-20
最終更新日2022-08-31
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
7ZAG
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BU of 7zag by Molmil
Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B.
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R.
登録日2022-03-22
公開日2022-08-03
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
7ZAH
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Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA, aIF1A and aIF5B
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R.
登録日2022-03-22
公開日2022-08-03
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
9FS6
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BU of 9fs6 by Molmil
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA with h44 in up position
分子名称: GUANOSINE-5'-TRIPHOSPHATE, LSU ribosomal protein S26E (Rps26E), LSU ribosomal protein S30E (Rps30E), ...
著者Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
登録日2024-06-20
公開日2025-01-15
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FSF
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Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNA with h44 in up position
分子名称: ADENOSINE-5'-TRIPHOSPHATE, LSU ribosomal protein S30E (Rps30E), Large ribosomal subunit protein eL8, ...
著者Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
登録日2024-06-21
公開日2025-01-15
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FS8
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Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aEF1A-like mRNA
分子名称: LSU ribosomal protein S26E (Rps26E), LSU ribosomal protein S30E (Rps30E), Large ribosomal subunit protein eL8, ...
著者Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
登録日2024-06-20
公開日2025-01-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FY0
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BU of 9fy0 by Molmil
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA
分子名称: GUANOSINE-5'-TRIPHOSPHATE, LSU ribosomal protein S26E (Rps26E), LSU ribosomal protein S30E (Rps30E), ...
著者Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
登録日2024-07-02
公開日2025-01-15
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
1P7P
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Methionyl-tRNA synthetase from Escherichia coli complexed with methionine phosphonate
分子名称: (1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHONIC ACID, Methionyl-tRNA synthetase, ZINC ION
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-05
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
9FHL
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BU of 9fhl by Molmil
High-resolution cryo-EM structure of Saccharolobus solfataricus 30S ribosomal subunit bound to mRNA and initiator tRNA
分子名称: Initiator tRNA Met, LSU ribosomal protein S30E (Rps30E), Large ribosomal subunit protein eL8, ...
著者Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
登録日2024-05-27
公開日2025-01-15
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FRA
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BU of 9fra by Molmil
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNA
分子名称: LSU ribosomal protein S30E (Rps30E), Large ribosomal subunit protein eL8, MAGNESIUM ION, ...
著者Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
登録日2024-06-18
公開日2025-01-15
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FRL
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BU of 9frl by Molmil
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNA with h44 in up position
分子名称: LSU ribosomal protein S30E (Rps30E), Large ribosomal subunit protein eL8, MAGNESIUM ION, ...
著者Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
登録日2024-06-19
公開日2025-01-15
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FRK
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BU of 9frk by Molmil
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNA
分子名称: LSU ribosomal protein S30E (Rps30E), Large ribosomal subunit protein eL8, MAGNESIUM ION, ...
著者Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
登録日2024-06-19
公開日2025-01-15
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
1PFY
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METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONYL SULPHAMOYL ADENOSINE
分子名称: 5'-O-[(L-METHIONYL)-SULPHAMOYL]ADENOSINE, Methionyl-tRNA synthetase, ZINC ION
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PFU
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METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONINE PHOSPHINATE
分子名称: (1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHINIC ACID, Methionyl-tRNA synthetase, ZINC ION
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PG0
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Methionyl-trna synthetase from escherichia coli complexed with methioninyl adenylate
分子名称: L-METHIONYL ADENYLATE, Methionyl-tRNA synthetase
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PFW
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METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH TRIFLUOROMETHIONINE
分子名称: 2-AMINO-4-TRIFLUOROMETHYLSULFANYL-BUTYRIC ACID, Methionyl-tRNA synthetase, ZINC ION
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PFV
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METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH DIFLUOROMETHIONINE
分子名称: Methionyl-tRNA synthetase, S-(DIFLUOROMETHYL)HOMOCYSTEINE, ZINC ION
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PG2
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METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONINE AND ADENOSINE
分子名称: ADENOSINE, METHIONINE, Methionyl-tRNA synthetase
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003

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