Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 382 results

7X52
DownloadVisualize
BU of 7x52 by Molmil
Crystal structure of Bacteroides thetaiotaomicron glutamate decarboxylase BTGAD-PLP complex
Descriptor: ACETATE ION, Glutamate decarboxylase, MALONATE ION, ...
Authors:Liu, S, Du, G, Wang, Y, Wen, B, Xin, F.
Deposit date:2022-03-03
Release date:2023-04-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Coordinated regulation of Bacteroides thetaiotaomicron glutamate decarboxylase activity by multiple elements under different pH.
Food Chem, 403, 2023
4G2L
DownloadVisualize
BU of 4g2l by Molmil
Human PDE9 in complex with selective compound
Descriptor: 1-cyclopentyl-6-{(1R)-1-[3-(pyrimidin-2-yl)azetidin-1-yl]ethyl}-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Liu, S.
Deposit date:2012-07-12
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Application of structure-based drug design and parallel chemistry to identify selective, brain penetrant, in vivo active phosphodiesterase 9A inhibitors.
J.Med.Chem., 55, 2012
4G2J
DownloadVisualize
BU of 4g2j by Molmil
Human pde9 in complex with selective compound
Descriptor: 1-cyclopentyl-6-[(1R)-1-(3-phenoxyazetidin-1-yl)ethyl]-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Liu, S.
Deposit date:2012-07-12
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Application of structure-based drug design and parallel chemistry to identify selective, brain penetrant, in vivo active phosphodiesterase 9A inhibitors.
J.Med.Chem., 55, 2012
7X51
DownloadVisualize
BU of 7x51 by Molmil
Crystal structure of Bacteroides thetaiotaomicron glutamate decarboxylase BTGAD-PLP-GUA complex
Descriptor: GLUTARIC ACID, Glutamate decarboxylase, MALONATE ION, ...
Authors:Liu, S, Du, G, Wang, L, Wen, B, Xin, F.
Deposit date:2022-03-03
Release date:2023-04-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Coordinated regulation of Bacteroides thetaiotaomicron glutamate decarboxylase activity by multiple elements under different pH.
Food Chem, 403, 2023
4E90
DownloadVisualize
BU of 4e90 by Molmil
Human phosphodiesterase 9 in complex with inhibitors
Descriptor: 6-[(3S,4S)-4-methyl-1-(pyrimidin-2-ylmethyl)pyrrolidin-3-yl]-1-(tetrahydro-2H-pyran-4-yl)-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Liu, S.
Deposit date:2012-03-20
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Application of structure-based drug design and parallel chemistry to identify selective, brain penetrant, in vivo active phosphodiesterase 9A inhibitors.
J.Med.Chem., 55, 2012
7WUB
DownloadVisualize
BU of 7wub by Molmil
Cryo-EM structure of dodecamer P97
Descriptor: 3-[3-cyclopentylsulfanyl-5-[[3-methyl-4-(4-methylsulfonylphenyl)phenoxy]methyl]-1,2,4-triazol-4-yl]pyridine, ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Liu, S, Wang, T.
Deposit date:2022-02-08
Release date:2022-03-23
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structure of dodecamer P97 at 2.99 Angstroms resolution
To Be Published
7X4R
DownloadVisualize
BU of 7x4r by Molmil
Crystal structure of Bacteroides thetaiotaomicron glutamate decarboxylase
Descriptor: Glutamate decarboxylase
Authors:Liu, S, Wang, Y, Du, G, Wen, B, Xin, F.
Deposit date:2022-03-03
Release date:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Coordinated regulation of Bacteroides thetaiotaomicron glutamate decarboxylase activity by multiple motifs
To Be Published
5LQY
DownloadVisualize
BU of 5lqy by Molmil
Structure of F-ATPase from Pichia angusta, in state2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase OSCP subunit, ...
Authors:Vinothkumar, K.R, Montgomery, M.G, Liu, S, Walker, J.E.
Deposit date:2016-08-17
Release date:2016-11-16
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Structure of the mitochondrial ATP synthase fromPichia angustadetermined by electron cryo-microscopy.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LQX
DownloadVisualize
BU of 5lqx by Molmil
Structure of F-ATPase from Pichia angusta, state3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase AAP1 subunit, ...
Authors:Vinothkumar, K.R, Montgomery, M.G, Liu, S, Walker, J.E.
Deposit date:2016-08-17
Release date:2016-11-16
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Structure of the mitochondrial ATP synthase fromPichia angustadetermined by electron cryo-microscopy.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LQZ
DownloadVisualize
BU of 5lqz by Molmil
Structure of F-ATPase from Pichia angusta, state1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase OSCP subunit, ...
Authors:Vinothkumar, K.R, Montgomery, M.G, Liu, S, Walker, J.E.
Deposit date:2016-08-17
Release date:2016-11-16
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structure of the mitochondrial ATP synthase fromPichia angustadetermined by electron cryo-microscopy.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
6THY
DownloadVisualize
BU of 6thy by Molmil
Botulinum neurotoxin A3 Hc domain in complex with GD1a
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, BoNT/A3, ...
Authors:Gregory, K.S, Acharya, K.R, Liu, S.M.
Deposit date:2019-11-21
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of botulinum neurotoxin subtype A3 cell binding domain in complex with GD1a co-receptor ganglioside.
Febs Open Bio, 10, 2020
1KBL
DownloadVisualize
BU of 1kbl by Molmil
PYRUVATE PHOSPHATE DIKINASE
Descriptor: AMMONIUM ION, PYRUVATE PHOSPHATE DIKINASE, SULFATE ION
Authors:Herzberg, O, Chen, C.C, Liu, S.
Deposit date:2001-11-06
Release date:2002-01-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis
Biochemistry, 41, 2002
4DGP
DownloadVisualize
BU of 4dgp by Molmil
The wild-type Src homology 2 (SH2)-domain containing protein tyrosine phosphatase-2 (SHP2)
Descriptor: Tyrosine-protein phosphatase non-receptor type 11
Authors:Yu, Z.H, Xu, J, Walls, C.D, Chen, L, Zhang, S, Wu, L, Wang, L.N, Liu, S.J, Zhang, Z.Y.
Deposit date:2012-01-26
Release date:2013-03-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Mechanistic Insights into LEOPARD Syndrome-Associated SHP2 Mutations.
J.Biol.Chem., 288, 2013
8XVE
DownloadVisualize
BU of 8xve by Molmil
Cryo-EM structure of ETBR bound with BQ3020
Descriptor: BQ3020, Exo-alpha-sialidase,Endothelin receptor type B, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Hou, J.Y, Liu, S.H, Wu, L.J, Liu, Z.J, Hua, T.
Deposit date:2024-01-15
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of antagonist selectivity in endothelin receptors.
Cell Discov, 10, 2024
8XVH
DownloadVisualize
BU of 8xvh by Molmil
Cryo-EM structure of ETBR bound with Endothelin1
Descriptor: Endothelin-1, Exo-alpha-sialidase,Endothelin receptor type B, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Hou, J.Y, Liu, S.H, Wu, L.J, Liu, Z.J, Hua, T.
Deposit date:2024-01-15
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural basis of antagonist selectivity in endothelin receptors.
Cell Discov, 10, 2024
4WUY
DownloadVisualize
BU of 4wuy by Molmil
Crystal Structure of Protein Lysine Methyltransferase SMYD2 in complex with LLY-507, a Cell-Active, Potent and Selective Inhibitor
Descriptor: 5-cyano-2'-{4-[2-(3-methyl-1H-indol-1-yl)ethyl]piperazin-1-yl}-N-[3-(pyrrolidin-1-yl)propyl]biphenyl-3-carboxamide, GLYCEROL, N-lysine methyltransferase SMYD2, ...
Authors:Nguyen, H, Allali-Hassani, A, Antonysamy, S, Chang, S, Chen, L.H, Curtis, C, Emtage, S, Fan, L, Gheyi, T, Li, F, Liu, S, Martin, J.R, Mendel, D, Olsen, J.B, Pelletier, L, Shatseva, T, Wu, S, Zhang, F.F, Arrowsmith, C.H, Brown, P.J, Campbell, R.M, Garcia, B.A, Barsyte-Lovejoy, D, Mader, M, Vedadi, M.
Deposit date:2014-11-04
Release date:2015-04-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:LLY-507, a Cell-active, Potent, and Selective Inhibitor of Protein-lysine Methyltransferase SMYD2.
J.Biol.Chem., 290, 2015
8ZFK
DownloadVisualize
BU of 8zfk by Molmil
Caenorhabditis elegans ACR-23 in betaine and monepantel bound state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Betaine receptor acr-23,Soluble cytochrome b562, ...
Authors:Chen, Q.F, Liu, F.L, Li, T.Y, Gong, H.H, Guo, F, Liu, S.
Deposit date:2024-05-08
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Structural basis of acetylcholine receptor like-23 (ACR-23) activation by anthelmintics monepantel and betaine
To Be Published
8XVI
DownloadVisualize
BU of 8xvi by Molmil
Cryo-EM structure of ETAR bound with Endothelin1
Descriptor: Endoglucanase H,Endothelin-1 receptor, Endothelin-1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Hou, J.Y, Liu, S.H, Wu, L.J, Liu, Z.J, Hua, T.
Deposit date:2024-01-15
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structural basis of antagonist selectivity in endothelin receptors.
Cell Discov, 10, 2024
8HPV
DownloadVisualize
BU of 8hpv by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron Prototype S-trimer in complex with fab L4.65 and L5.34
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2', fab L4.65, ...
Authors:Gao, G.F, Liu, S.
Deposit date:2022-12-13
Release date:2024-01-31
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Dosing interval regimen shapes potency and breadth of antibody repertoire after vaccination of SARS-CoV-2 RBD protein subunit vaccine.
Cell Discov, 9, 2023
8HP9
DownloadVisualize
BU of 8hp9 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.2 S-trimer in complex with fab L4.65 and L5.34
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2', fab L4.65, ...
Authors:Gao, G.F, Liu, S.
Deposit date:2022-12-12
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Dosing interval regimen shapes potency and breadth of antibody repertoire after vaccination of SARS-CoV-2 RBD protein subunit vaccine.
Cell Discov, 9, 2023
8HPQ
DownloadVisualize
BU of 8hpq by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.4 S-trimer in complex with fab L4.65 and L5.34
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2', fab L4.65, ...
Authors:Gao, G.F, Liu, S.
Deposit date:2022-12-12
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Dosing interval regimen shapes potency and breadth of antibody repertoire after vaccination of SARS-CoV-2 RBD protein subunit vaccine.
Cell Discov, 9, 2023
8XVK
DownloadVisualize
BU of 8xvk by Molmil
Cryo-EM structure of ETAR bound with Ambrisentan
Descriptor: (2~{S})-2-(4,6-dimethylpyrimidin-2-yl)oxy-3-methoxy-3,3-diphenyl-propanoic acid, Endoglucanase H,Endothelin-1 receptor,Soluble cytochrome b562, anti-BRIL Fab Heavy chain, ...
Authors:Hou, J.Y, Liu, S.H, Wu, L.J, Liu, Z.J, Hua, T.
Deposit date:2024-01-15
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structural basis of antagonist selectivity in endothelin receptors.
Cell Discov, 10, 2024
8ZFL
DownloadVisualize
BU of 8zfl by Molmil
Caenorhabditis elegans ACR-23 in apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Betaine receptor acr-23,Soluble cytochrome b562
Authors:Chen, Q.F, Liu, F.L, Li, T.Y, Gong, H.H, Guo, F, Liu, S.
Deposit date:2024-05-08
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:Structural basis of acetylcholine receptor like-23 (ACR-23) activation by anthelmintics monepantel and betaine
To Be Published
8ZFM
DownloadVisualize
BU of 8zfm by Molmil
Caenorhabditis elegans ACR-23 in betaine bound state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Betaine receptor acr-23,Soluble cytochrome b562, ...
Authors:Chen, Q.F, Liu, F.L, Li, T.Y, Gong, H.H, Guo, F, Liu, S.
Deposit date:2024-05-08
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structural basis of acetylcholine receptor like-23 (ACR-23) activation by anthelmintics monepantel and betaine
To Be Published
8XVL
DownloadVisualize
BU of 8xvl by Molmil
Cryo-EM structure of ETAR bound with Zibotentan
Descriptor: Endoglucanase H,Endothelin-1 receptor,Soluble cytochrome b562, anti-BRIL Fab Heavy chain, anti-BRIL Fab Light chain, ...
Authors:Hou, J.Y, Liu, S.H, Wu, L.J, Liu, Z.J, Hua, T.
Deposit date:2024-01-15
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structural basis of antagonist selectivity in endothelin receptors.
Cell Discov, 10, 2024

224931

数据于2024-09-11公开中

PDB statisticsPDBj update infoContact PDBjnumon