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PDB: 802 results

6GL1
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BU of 6gl1 by Molmil
HLA-E*01:03 in complex with the HIV epitope, RL9HIV
Descriptor: ARG-MET-TYR-SER-PRO-THR-SER-ILE-LEU, Beta-2-microglobulin, MHC class I antigen, ...
Authors:Walters, L.C, Gillespie, G.M, McMichael, A.J, Rozbesky, D, Jones, E.Y, Harlos, K.
Deposit date:2018-05-22
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.623 Å)
Cite:Pathogen-derived HLA-E bound epitopes reveal broad primary anchor pocket tolerability and conformationally malleable peptide binding.
Nat Commun, 9, 2018
6I3T
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BU of 6i3t by Molmil
Crystal structure of murine neuroglobin bound to CO at 40 K.
Descriptor: ACETATE ION, CARBON MONOXIDE, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Ardiccioni, C, Exertier, C.
Deposit date:2018-11-07
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand pathways in neuroglobin revealed by low-temperature photodissociation and docking experiments.
Iucrj, 6, 2019
6H5Z
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BU of 6h5z by Molmil
Ferric murine neuroglobin F106A mutant
Descriptor: 1,4-DIETHYLENE DIOXIDE, Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Exertier, C, Vallone, B, Savino, C, Freda, I, Montemiglio, L.C, Cerutti, G, Scaglione, A, Parisi, G.
Deposit date:2018-07-25
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Proximal and distal control for ligand binding in neuroglobin: role of the CD loop and evidence for His64 gating.
Sci Rep, 9, 2019
6I40
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BU of 6i40 by Molmil
Crystal structure of murine neuroglobin bound to CO at 15K under illumination using optical fiber
Descriptor: ACETATE ION, CARBON MONOXIDE, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Ardiccioni, C, Exertier, C, Vallone, B.
Deposit date:2018-11-08
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ligand pathways in neuroglobin revealed by low-temperature photodissociation and docking experiments.
Iucrj, 6, 2019
6IDW
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BU of 6idw by Molmil
GH6 Orpinomyces sp. Y102 enzyme
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, GLYCEROL, ...
Authors:Tsai, L.C, Huang, H.C.
Deposit date:2018-09-11
Release date:2018-10-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Crystal structures of the GH6 Orpinomyces sp. Y102 CelC7 enzyme with exo and endo activity and its complex with cellobiose.
Acta Crystallogr D Struct Biol, 75, 2019
5VZ7
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BU of 5vz7 by Molmil
Pre-catalytic ternary complex of human Polymerase Mu (G433A) mutant with incoming nonhydrolyzable UMPNPP
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZD
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BU of 5vzd by Molmil
Pre-catalytic ternary complex of human Polymerase Mu (W434A) mutant with incoming nonhydrolyzable UMPNPP
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZF
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BU of 5vzf by Molmil
Post-catalytic complex of human Polymerase Mu (W434A) mutant with incoming dTTP
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*AP*T)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZA
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BU of 5vza by Molmil
Pre-catalytic ternary complex of human Polymerase Mu (G433S) mutant with incoming nonhydrolyzable UMPNPP
Descriptor: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZI
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BU of 5vzi by Molmil
Post-catalytic complex of human Polymerase Mu (W434H) mutant with incoming dTTP
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*AP*T)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZ8
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BU of 5vz8 by Molmil
Post-catalytic complex of human Polymerase Mu (G433A) mutant with incoming UTP
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZE
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BU of 5vze by Molmil
Post-catalytic complex of human Polymerase Mu (W434A) mutant with incoming UTP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.506 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZB
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BU of 5vzb by Molmil
Post-catalytic complex of human Polymerase Mu (G433S) mutant with incoming UTP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZH
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BU of 5vzh by Molmil
Post-catalytic complex of human Polymerase Mu (W434H) mutant with incoming UTP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5W7Y
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BU of 5w7y by Molmil
Crystal Structure of FHA domain of human APLF in complex with XRCC1 monophosphorylated mutated peptide
Descriptor: Aprataxin and PNK-like factor, DNA repair protein XRCC1
Authors:Pedersen, L.C, Kim, K, London, R.E.
Deposit date:2017-06-21
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications.
Nucleic Acids Res., 45, 2017
5W7W
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BU of 5w7w by Molmil
Crystal Structure of FHA domain of human APLF
Descriptor: Aprataxin and PNK-like factor, FORMIC ACID, SODIUM ION
Authors:Pedersen, L.C, Kim, K, London, R.E.
Deposit date:2017-06-21
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.348 Å)
Cite:Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications.
Nucleic Acids Res., 45, 2017
5W7X
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BU of 5w7x by Molmil
Crystal Structure of FHA domain of human APLF in complex with XRCC1 bisphospho peptide
Descriptor: Aprataxin and PNK-like factor, DNA repair protein XRCC1
Authors:Pedersen, L.C, Kim, K, London, R.E.
Deposit date:2017-06-21
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications.
Nucleic Acids Res., 45, 2017
5W4G
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BU of 5w4g by Molmil
Importin binding to NLS peptide of DNA polymerase lambda
Descriptor: DNA polymerase lambda, GLYCEROL, Importin subunit alpha-1, ...
Authors:Pedersen, L.C, London, R.E.
Deposit date:2017-06-10
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.038 Å)
Cite:Structure of Importin with bound NLS from DNA polymerase lambda
To Be Published
5W4F
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BU of 5w4f by Molmil
Importin binding to pol Mu NLS peptide
Descriptor: DNA-directed DNA/RNA polymerase mu, GLYCEROL, Importin subunit alpha-1
Authors:Pedersen, L.C, London, R.E.
Deposit date:2017-06-10
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Variations in nuclear localization strategies among pol X family enzymes.
Traffic, 2018
5W4E
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BU of 5w4e by Molmil
Importin binding to Tdt NLS peptide
Descriptor: GLYCEROL, Importin subunit alpha-1,Importin subunit alpha-1, human DNA repair polymerase Tdt
Authors:Pedersen, L.C, London, R.
Deposit date:2017-06-10
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Variations in nuclear localization strategies among pol X family enzymes.
Traffic, 2018
5VZ9
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BU of 5vz9 by Molmil
Post-catalytic complex of human Polymerase Mu (G433A) mutant with incoming dTTP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZG
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BU of 5vzg by Molmil
Pre-catalytic ternary complex of human Polymerase Mu (W434H) mutant with incoming nonhydrolyzable UMPNPP
Descriptor: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, CHLORIDE ION, ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5VZC
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BU of 5vzc by Molmil
Post-catalytic complex of human Polymerase Mu (G433S) mutant with incoming dTTP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2017-05-27
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.552 Å)
Cite:Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
5Y3X
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BU of 5y3x by Molmil
Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis
Descriptor: Beta-xylanase
Authors:Liu, X, Sun, L.C, Zhang, Y.B, Liu, T.F, Xin, F.J.
Deposit date:2017-07-31
Release date:2017-12-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights into the Thermophilic Adaption Mechanism of Endo-1,4-beta-Xylanase from Caldicellulosiruptor owensensis.
J. Agric. Food Chem., 66, 2018
4DZT
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BU of 4dzt by Molmil
Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1
Descriptor: Aqualysin-1, CALCIUM ION, phenylmethanesulfonic acid
Authors:Barnett, B.L, Green, P.R, Strickland, L.C, Oliver, J.D, Rydel, T, Sullivan, J.F.
Deposit date:2012-03-01
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1
To be Published

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