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PDB: 468 件
2DQB
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Crystal structure of dNTP triphosphohydrolase from Thermus thermophilus HB8, which is homologous to dGTP triphosphohydrolase
分子名称: Deoxyguanosinetriphosphate triphosphohydrolase, putative, MAGNESIUM ION
著者Kondo, N, Nakagawa, N, Ebihara, A, Chen, L, Liu, Z.-J, Wang, B.-C, Yokoyama, S, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-05-25
公開日2007-01-23
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of dNTP-inducible dNTP triphosphohydrolase: insight into broad specificity for dNTPs and triphosphohydrolase-type hydrolysis
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
2YVW
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Crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Aquifex aeolicus VF5
分子名称: PHOSPHATE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
著者Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-16
公開日2007-10-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Aquifex aeolicus VF5
To be Published
2Z06
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Crystal structure of uncharacterized conserved protein from Thermus thermophilus
分子名称: COBALT (II) ION, Putative uncharacterized protein TTHA0625
著者Kanagawa, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermus thermophilus
To be Published
2CUW
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Crystal Structure of Thermus thermophilus PurS, one of the subunits of Formylglycinamide Ribonucleotide Amidotransferase in the purine biosynthetic pathway
分子名称: PurS
著者Yanai, H, Kanagawa, M, Sampei, G, Kawai, G, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-30
公開日2005-11-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Thermus thermophilus PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway
To be Published
2CWL
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Crystal structure of manganese-free form of pseudocatalase from Thermus thermophilus HB8
分子名称: manganese-free pseudocatalase
著者Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-21
公開日2005-12-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and functional analysis of pseudocatalase from Thermus thermophilus HB8
To be Published
2CX5
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Crystal structure of a putative trans-editing enzyme for prolyl tRNA synthetase
分子名称: A PUTATIVE TRANS-EDITING ENZYME
著者Murayama, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a putative trans-editing enzyme for prolyl tRNA synthetase
To be Published
2YZH
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Crystal structure of peroxiredoxin-like protein from Aquifex aeolicus
分子名称: Probable thiol peroxidase, SULFATE ION
著者Ebihara, A, Manzoku, M, Fujimoto, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-05
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of peroxiredoxin-like protein from Aquifex aeolicus
to be published
2CVE
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Crystal structure of a conserved hypothetical protein TT1547 from thermus thermophilus HB8
分子名称: L(+)-TARTARIC ACID, hypothetical protein TTHA1053
著者Iino, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-02
公開日2005-12-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a conserved hypothetical protein TT1547 from thermus thermophilus HB8
To be Published
2YYH
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Crystal structure of Nudix family protein from Aquifex aeolicus
分子名称: 8-OXO-dGTPase domain
著者Nakagawa, N, Kishishita, S, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-30
公開日2007-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Nudix family protein from Aquifex aeolicus
To be Published
2CTZ
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Crystal structure of o-acetyl homoserine sulfhydrylase from Thermus thermophilus HB8
分子名称: O-acetyl-L-homoserine sulfhydrylase, PYRIDOXAL-5'-PHOSPHATE
著者Imagawa, T, Kousumi, Y, Tsuge, H, Utsunomiya, H, Ebihara, A, Nakagawa, N, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-24
公開日2005-11-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of o-acetyl homoserine sulfhydrylase from Thermus thermophilus HB8
To be Published
2CVK
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Crystal Structure of Thermus thermophilus Thioredoxin
分子名称: Thioredoxin
著者Yanai, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-04
公開日2005-12-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of a Reduced Thioredoxin from Thermus thermophilus HB8
To be Published
2D4O
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BU of 2d4o by Molmil
Crystal structure of TTHA1254 (I68M mutant) from Thermus thermophilus HB8
分子名称: hypothetical protein TTHA1254
著者Mizohata, E, Uchikubo, T, Kinoshita, Y, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-21
公開日2006-04-21
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of TTHA1254 (I68M mutant) from Thermus thermophilus HB8
To be Published
1IV0
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Solution structure of the YqgF-family protein (N-terminal fragment)
分子名称: hypothetical protein
著者Inoue, M, Kigawa, T, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-08
公開日2003-10-07
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the YqgF-family protein (N-terminal fragment)
To be published
2YZK
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Crystal structure of orotate phosphoribosyltransferase from Aeropyrum pernix
分子名称: Orotate phosphoribosyltransferase, PHOSPHATE ION
著者Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of orotate phosphoribosyltransferase from Aeropyrum pernix
To be Published
2Z0G
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The crystal structure of PII protein
分子名称: CHLORIDE ION, Nitrogen regulatory protein P-II, PHOSPHATE ION
著者Sakai, H, Shinkai, A, Kitamura, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2008-05-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of PII protein
To be Published
2ZDH
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Crystal structure of D-Alanine:D-Alanine Ligase with ADP and D-Alanine from Thermus thermophius HB8
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase, ...
著者Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-11-22
公開日2008-05-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of D-Alanine:D-Alanine Ligase with ADP and D-Alanine from Thermus thermophius HB8
To be Published
3ACD
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BU of 3acd by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase with IMP from Thermus thermophilus HB8
分子名称: 1,4-DIETHYLENE DIOXIDE, Hypoxanthine-guanine phosphoribosyltransferase, INOSINIC ACID
著者Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-12-30
公開日2010-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010
3AAM
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Crystal structure of endonuclease IV from Thermus thermophilus HB8
分子名称: Endonuclease IV, MANGANESE (II) ION, PHOSPHATE ION
著者Asano, R, Ishikawa, H, Nakane, S, Baba, S, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-11-20
公開日2010-12-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA
Acta Crystallogr.,Sect.D, 67, 2011
2ZBR
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Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus in complex with S-adenosyl-ornithine
分子名称: Ribosomal protein L11 methyltransferase, SINEFUNGIN
著者Kaminishi, T, Sakai, H, Takemoto-Hori, C, Terada, T, Nakagawa, N, Maoka, N, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-10-26
公開日2008-11-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus
To be Published
3AU6
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DNA polymerase X from Thermus thermophilus HB8 ternary complex with primer/template DNA and ddGTP
分子名称: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*AP*GP*TP*AP*TP*(DDG))-3', 5'-D(*CP*GP*GP*CP*CP*AP*TP*AP*CP*TP*G)-3', ...
著者Nakane, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-01-28
公開日2012-01-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
2ZOP
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X-ray crystal structure of a CRISPR-associated Cmr5 family protein from Thermus thermophilus HB8
分子名称: Putative uncharacterized protein TTHB164, SULFATE ION
著者Sakamoto, K, Agari, Y, Shinkai, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-05-28
公開日2009-02-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray crystal structure of a CRISPR-associated RAMP superfamily protein, Cmr5, from Thermus thermophilus HB8
Proteins, 75, 2009
3AF6
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The crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshii complexed with RNA-analog
分子名称: 5'-R(*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU))-3', Putative uncharacterized protein PH1404, SULFATE ION, ...
著者Nishida, Y, Ishikawa, H, Nakagawa, N, Masui, R, Kuramitsu, S.
登録日2010-02-24
公開日2010-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of an archaeal cleavage and polyadenylation specificity factor subunit from Pyrococcus horikoshii
Proteins, 78, 2010
3ACC
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Crystal structure of hypoxanthine-guanine phosphoribosyltransferase with GMP from Thermus thermophilus HB8
分子名称: 1,4-DIETHYLENE DIOXIDE, GUANOSINE-5'-MONOPHOSPHATE, Hypoxanthine-guanine phosphoribosyltransferase
著者Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-12-30
公開日2010-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010
2EG2
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The crystal structure of PII protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, Nitrogen regulatory protein P-II
著者Sakai, H, Shinkai, A, Kitamura, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-27
公開日2008-03-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献The crystal structure of PII protein
To be Published
3A4Y
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Crystal Structure of H61A mutant TTHA0252 from Thermus thermophilus HB8
分子名称: CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-22
公開日2009-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of H61A mutant TTHA0252 from Thermus thermophilus HB8
to be published

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