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PDB: 38 件

5B2D
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Crystal structure of Mumps virus hemagglutinin-neuraminidase bound to 3-sialyllactose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HN protein, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Kubota, M, Takeuchi, K, Watanabe, S, Ohno, S, Matsuoka, R, Kohda, D, Hiramatsu, H, Suzuki, Y, Nakayama, T, Terada, T, Shimizu, K, Shimizu, N, Yanagi, Y, Hashiguchi, T.
登録日2016-01-14
公開日2016-09-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.177 Å)
主引用文献Trisaccharide containing alpha 2,3-linked sialic acid is a receptor for mumps virus
Proc.Natl.Acad.Sci.USA, 113, 2016
5B2C
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Crystal structure of Mumps virus hemagglutinin-neuraminidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HN protein, SULFATE ION
著者Kubota, M, Takeuchi, K, Watanabe, S, Ohno, S, Matsuoka, R, Kohda, D, Hiramatsu, H, Suzuki, Y, Nakayama, T, Terada, T, Shimizu, K, Shimizu, N, Yanagi, Y, Hashiguchi, T.
登録日2016-01-14
公開日2016-09-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.238 Å)
主引用文献Trisaccharide containing alpha 2,3-linked sialic acid is a receptor for mumps virus
Proc.Natl.Acad.Sci.USA, 113, 2016
6JJN
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Crystal structure of Mumps virus hemagglutinin-neuraminidase bound to sialyl lewisX
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HN protein, ...
著者Kubota, M, Matsuoka, R, Suzuki, T, Yonekura, K, Yanagi, Y, Hashiguchi, T.
登録日2019-02-26
公開日2019-05-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular Mechanism of the Flexible Glycan Receptor Recognition by Mumps Virus.
J.Virol., 93, 2019
6JJM
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Crystal structure of Mumps virus hemagglutinin-neuraminidase bound to the oligosaccharide portion of the GM2 ganglioside
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HN protein, ...
著者Kubota, M, Matsuoka, R, Suzuki, T, Yonekura, K, Yanagi, Y, Hashiguchi, T.
登録日2019-02-26
公開日2019-05-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.049 Å)
主引用文献Molecular Mechanism of the Flexible Glycan Receptor Recognition by Mumps Virus.
J.Virol., 93, 2019
1CYG
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CYCLODEXTRIN GLUCANOTRANSFERASE (E.C.2.4.1.19) (CGTASE)
分子名称: CALCIUM ION, CYCLODEXTRIN GLUCANOTRANSFERASE
著者Kubota, M, Matsuura, Y, Sakai, S, Katsube, Y.
登録日1993-02-03
公開日1995-02-27
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献

1JDA
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MALTOTETRAOSE-FORMING EXO-AMYLASE
分子名称: 1,4-ALPHA MALTOTETRAHYDROLASE, CALCIUM ION
著者Yoshioka, Y, Hasegawa, K, Matsuura, Y, Katsube, Y, Kubota, M.
登録日1997-06-16
公開日1997-10-15
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of a mutant maltotetraose-forming exo-amylase cocrystallized with maltopentaose.
J.Mol.Biol., 271, 1997
1QI4
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MUTANT (E219G) MALTOTETRAOSE-FORMING EXO-AMYLASE IN COMPLEX WITH MALTOTETRAOSE
分子名称: CALCIUM ION, PROTEIN (EXO-MALTOTETRAOHYDROLASE), alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hasegawa, K, Kubota, M, Matsuura, Y.
登録日1999-06-01
公開日1999-11-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Roles of catalytic residues in alpha-amylases as evidenced by the structures of the product-complexed mutants of a maltotetraose-forming amylase.
Protein Eng., 12, 1999
1QI5
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MUTANT (D294N) MALTOTETRAOSE-FORMING EXO-AMYLASE IN COMPLEX WITH MALTOTETRAOSE
分子名称: CALCIUM ION, PROTEIN (EXO-MALTOTETRAOHYDROLASE), alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hasegawa, K, Kubota, M, Matsuura, Y.
登録日1999-06-03
公開日1999-11-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Roles of catalytic residues in alpha-amylases as evidenced by the structures of the product-complexed mutants of a maltotetraose-forming amylase.
Protein Eng., 12, 1999
1QI3
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MUTANT (D193N) MALTOTETRAOSE-FORMING EXO-AMYLASE IN COMPLEX WITH MALTOTETRAOSE
分子名称: CALCIUM ION, PROTEIN (EXO-MALTOTETRAOHYDROLASE), alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Hasegawa, K, Kubota, M, Matsuura, Y.
登録日1999-06-01
公開日1999-11-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Roles of catalytic residues in alpha-amylases as evidenced by the structures of the product-complexed mutants of a maltotetraose-forming amylase.
Protein Eng., 12, 1999
1QPK
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MUTANT (D193G) MALTOTETRAOSE-FORMING EXO-AMYLASE IN COMPLEX WITH MALTOTETRAOSE
分子名称: CALCIUM ION, PROTEIN (MALTOTETRAOSE-FORMING AMYLASE), alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Yoshioka, Y, Hasegawa, K, Matsuura, Y, Katsube, Y, Kubota, M.
登録日1999-05-26
公開日1999-11-17
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Roles of catalytic residues in alpha-amylases as evidenced by the structures of the product-complexed mutants of a maltotetraose-forming amylase.
Protein Eng., 12, 1999
1GCY
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HIGH RESOLUTION CRYSTAL STRUCTURE OF MALTOTETRAOSE-FORMING EXO-AMYLASE
分子名称: CALCIUM ION, GLUCAN 1,4-ALPHA-MALTOTETRAHYDROLASE
著者Mezaki, Y, Katsuya, Y, Kubota, M, Matsuura, Y.
登録日2000-08-14
公開日2000-08-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallization and structural analysis of intact maltotetraose-forming exo-amylase from Pseudomonas stutzeri.
Biosci.Biotechnol.Biochem., 65, 2001
1F3P
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FERREDOXIN REDUCTASE (BPHA4)-NADH COMPLEX
分子名称: FERREDOXIN REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Senda, T, Yamada, T, Sakurai, N, Kubota, M, Nishizaki, T, Masai, E, Fukuda, M, Mitsuidagger, Y.
登録日2000-06-06
公開日2001-06-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of NADH-dependent ferredoxin reductase component in biphenyl dioxygenase.
J.Mol.Biol., 304, 2000
1JDC
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BU of 1jdc by Molmil
MUTANT (E219Q) MALTOTETRAOSE-FORMING EXO-AMYLASE COCRYSTALLIZED WITH MALTOTETRAOSE (CRYSTAL TYPE 1)
分子名称: 1,4-ALPHA MALTOTETRAHYDROLASE, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Yoshioka, Y, Hasegawa, K, Matsuura, Y, Katsube, Y, Kubota, M.
登録日1997-06-16
公開日1997-10-15
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of a mutant maltotetraose-forming exo-amylase cocrystallized with maltopentaose.
J.Mol.Biol., 271, 1997
1JDD
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MUTANT (E219Q) MALTOTETRAOSE-FORMING EXO-AMYLASE COCRYSTALLIZED WITH MALTOTETRAOSE (CRYSTAL TYPE 2)
分子名称: 1,4-ALPHA MALTOTETRAHYDROLASE, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Yoshioka, Y, Hasegawa, K, Matsuura, Y, Katsube, Y, Kubota, M.
登録日1997-06-16
公開日1997-10-15
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of a mutant maltotetraose-forming exo-amylase cocrystallized with maltopentaose.
J.Mol.Biol., 271, 1997
1IV8
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Crystal Structure of Maltooligosyl trehalose synthase
分子名称: MALTOOLIGOSYL TREHALOSE SYNTHASE
著者Kobayashi, M, Kubota, M, Matsuura, Y.
登録日2002-03-15
公開日2003-02-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Refined Structure and Functional Implications of Trehalose Synthase from Sulfolobus acidocaldarius
J.APPL.Glyosci., 50, 2003
5YZD
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Crystal structure of the prefusion form of measles virus fusion protein in complex with a fusion inhibitor peptide (FIP)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, glycoprotein F1,measles virus fusion protein, ...
著者Hashiguchi, T, Fukuda, Y, Matsuoka, R, Kuroda, D, Kubota, M, Shirogane, Y, Watanabe, S, Tsumoto, K, Kohda, D, Plemper, R.K, Yanagi, Y.
登録日2017-12-14
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.636 Å)
主引用文献Structures of the prefusion form of measles virus fusion protein in complex with inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5YZC
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Crystal structure of the prefusion form of measles virus fusion protein in complex with a fusion inhibitor compound (AS-48)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-nitro-2-[(phenylacetyl)amino]benzamide, ...
著者Hashiguchi, T, Fukuda, Y, Matsuoka, R, Kuroda, D, Kubota, M, Shirogane, Y, Watanabe, S, Tsumoto, K, Kohda, D, Plemper, R.K, Yanagi, Y.
登録日2017-12-14
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.334 Å)
主引用文献Structures of the prefusion form of measles virus fusion protein in complex with inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5YXW
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Crystal structure of the prefusion form of measles virus fusion protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, glycoprotein F1,measles virus fusion protein, ...
著者Hashiguchi, T, Fukuda, Y, Matsuoka, R, Kuroda, D, Kubota, M, Shirogane, Y, Watanabe, S, Tsumoto, K, Kohda, D, Plemper, R.K, Yanagi, Y.
登録日2017-12-07
公開日2018-02-21
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (2.776 Å)
主引用文献Structures of the prefusion form of measles virus fusion protein in complex with inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1WQO
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CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
分子名称: CHLORIDE ION, LYSOZYME, SODIUM ION
著者Yamagata, Y, Kubota, M, Sumikawa, Y, Funahashi, J, Fujii, S, Yutani, K.
登録日1998-02-09
公開日1998-07-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
1WQM
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CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
分子名称: CHLORIDE ION, LYSOZYME, SODIUM ION
著者Yamagata, Y, Kubota, M, Sumikawa, Y, Funahashi, J, Fujii, S, Yutani, K.
登録日1998-02-09
公開日1998-07-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
1WQP
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CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
分子名称: CHLORIDE ION, LYSOZYME, SODIUM ION
著者Yamagata, Y, Kubota, M, Sumikawa, Y, Funahashi, J, Fujii, S, Yutani, K.
登録日1998-02-09
公開日1998-07-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
1WQN
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CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
分子名称: CHLORIDE ION, LYSOZYME, SODIUM ION
著者Yamagata, Y, Kubota, M, Sumikawa, Y, Funahashi, J, Fujii, S, Yutani, K.
登録日1998-02-09
公開日1998-07-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
1WQQ
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CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
分子名称: CHLORIDE ION, LYSOZYME, SODIUM ION
著者Yamagata, Y, Kubota, M, Sumikawa, Y, Funahashi, J, Fujii, S, Yutani, K.
登録日1998-02-09
公開日1998-07-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
1WQR
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CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
分子名称: CHLORIDE ION, LYSOZYME, SODIUM ION
著者Yamagata, Y, Kubota, M, Sumikawa, Y, Funahashi, J, Fujii, S, Yutani, K.
登録日1998-02-09
公開日1998-07-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
1B5U
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CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME: CALORIMETRY AND X-RAY ANALYSIS OF SIX SER->ALA MUTANT
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Kubota, M, Funahashi, J, Fujii, S, Yutani, K.
登録日1999-01-11
公開日1999-01-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six Ser --> Ala mutants.
Biochemistry, 38, 1999

 

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