1J1P
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![BU of 1j1p by Molmil](/molmil-images/mine/1j1p) | Crystal structure of HyHEL-10 Fv mutant LS91A complexed with hen egg white lysozyme | 分子名称: | Ig VH,anti-lysozyme, Lysozyme C, lysozyme binding Ig kappa chain V23-J2 region | 著者 | Yokota, A, Tsumoto, K, Shiroishi, M, Kondo, H, Kumagai, I. | 登録日 | 2002-12-13 | 公開日 | 2003-01-14 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The Role of Hydrogen Bonding via Interfacial Water Molecules in Antigen-Antibody Complexation. THE HyHEL-10-HEL INTERACTION J.BIOL.CHEM., 278, 2003
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1J1O
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![BU of 1j1o by Molmil](/molmil-images/mine/1j1o) | Crystal Structure of HyHEL-10 Fv mutant LY50F complexed with hen egg white lysozyme | 分子名称: | Ig VH,anti-lysozyme, Lysozyme C, lysozyme binding Ig kappa chain V23-J2 region | 著者 | Yokota, A, Tsumoto, K, Shiroishi, M, Kondo, H, Kumagai, I. | 登録日 | 2002-12-13 | 公開日 | 2003-01-14 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The Role of Hydrogen Bonding via Interfacial Water Molecules in Antigen-Antibody Complexation. THE HyHEL-10-HEL INTERACTION J.BIOL.CHEM., 278, 2003
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1J1X
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![BU of 1j1x by Molmil](/molmil-images/mine/1j1x) | Crystal Structure of HyHEL-10 Fv mutant LS93A complexed with hen egg white lysozyme | 分子名称: | Ig VH,anti-lysozyme, Lysozyme C, lysozyme binding Ig kappa chain V23-J2 region | 著者 | Yokota, A, Tsumoto, K, Shiroishi, M, Kondo, H, Kumagai, I. | 登録日 | 2002-12-20 | 公開日 | 2003-01-14 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The Role of Hydrogen Bonding via Interfacial Water Molecules in Antigen-Antibody Complexation. THE HyHEL-10-HEL INTERACTION J.BIOL.CHEM., 278, 2003
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1UA6
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![BU of 1ua6 by Molmil](/molmil-images/mine/1ua6) | Crystal structure of HYHEL-10 FV MUTANT SFSF complexed with HEN EGG WHITE LYSOZYME complex | 分子名称: | Ig VH,anti-lysozyme, Lysozyme C, lysozyme binding Ig kappa chain V23-J2 region | 著者 | Kumagai, I, Nishimiya, Y, Kondo, H, Tsumoto, K. | 登録日 | 2003-02-28 | 公開日 | 2004-03-09 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural consequences of target epitope-directed functional alteration of an antibody. The case of anti-hen lysozyme antibody, HyHEL-10 J.Biol.Chem., 278, 2003
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1JRU
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![BU of 1jru by Molmil](/molmil-images/mine/1jru) | NMR STRUCTURE OF THE UBX DOMAIN FROM P47 (ENERGY MINIMISED AVERAGE) | 分子名称: | p47 protein | 著者 | Yuan, X.M, Shaw, A, Zhang, X.D, Kondo, H, Lally, J, Freemont, P.S, Matthews, S.J. | 登録日 | 2001-08-15 | 公開日 | 2001-08-17 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure and interaction surface of the C-terminal domain from p47: a major p97-cofactor involved in SNARE disassembly. J.Mol.Biol., 311, 2001
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1UAC
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![BU of 1uac by Molmil](/molmil-images/mine/1uac) | Crystal Structure of HYHEL-10 FV MUTANT SFSF Complexed with TURKEY WHITE LYSOZYME | 分子名称: | Ig VH,anti-lysozyme, Lysozyme C, lysozyme binding Ig kappa chain V23-J2 region | 著者 | Kumagai, I, Nishimiya, Y, Kondo, H, Tsumoto, K. | 登録日 | 2003-03-08 | 公開日 | 2004-03-23 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structural consequences of target epitope-directed functional alteration of an antibody. The case of anti-hen lysozyme antibody, HyHEL-10 J.BIOL.CHEM., 278, 2003
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1SQJ
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![BU of 1sqj by Molmil](/molmil-images/mine/1sqj) | Crystal Structure Analysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH) | 分子名称: | oligoxyloglucan reducing-end-specific cellobiohydrolase | 著者 | Yaoi, K, Kondo, H, Noro, N, Suzuki, M, Tsuda, S, Mitsuishi, Y. | 登録日 | 2004-03-19 | 公開日 | 2004-07-20 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Tandem Repeat of a Seven-Bladed beta-Propeller Domain in Oligoxyloglucan Reducing-End-Specific Cellobiohydrolase Structure, 12, 2004
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3WP9
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![BU of 3wp9 by Molmil](/molmil-images/mine/3wp9) | Crystal structure of antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. | 分子名称: | Ice-binding protein | 著者 | Hanada, Y, Nishimiya, Y, Miura, A, Tsuda, S, Kondo, H. | 登録日 | 2014-01-10 | 公開日 | 2014-07-02 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Hyperactive antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. has a compound ice-binding site without repetitive sequences. Febs J., 281, 2014
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2EBS
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![BU of 2ebs by Molmil](/molmil-images/mine/2ebs) | Crystal Structure Anaalysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH) D465N Mutant Complexed with a Xyloglucan Heptasaccharide | 分子名称: | Oligoxyloglucan reducing end-specific cellobiohydrolase, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | 著者 | Yaoi, K, Kondo, H, Hiyoshi, A, Noro, N, Sugimoto, H, Miyazaki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-02-09 | 公開日 | 2007-06-26 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | The Structural Basis for the Exo-mode of Action in GH74 Oligoxyloglucan Reducing End-specific Cellobiohydrolase. J.Mol.Biol., 370, 2007
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3A0F
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![BU of 3a0f by Molmil](/molmil-images/mine/3a0f) | The crystal structure of Geotrichum sp. M128 xyloglucanase | 分子名称: | Xyloglucanase | 著者 | Yaoi, K, Kondo, H, Hiyoshi, A, Noro, N, Sugimoto, H, Tsuda, S, Miyazaki, K. | 登録日 | 2009-03-16 | 公開日 | 2009-09-08 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | The crystal structure of a xyloglucan-specific endo-beta-1,4-glucanase from Geotrichum sp. M128 xyloglucanase reveals a key amino acid residue for substrate specificity Febs J., 276, 2009
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2ZIB
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![BU of 2zib by Molmil](/molmil-images/mine/2zib) | Crystal structure analysis of calcium-independent type II antifreeze protein | 分子名称: | SULFATE ION, Type II antifreeze protein | 著者 | Nishimiya, Y, Sato, R, Kondo, H, Noro, N, Sugimoto, H, Suzuki, M, Tsuda, S. | 登録日 | 2008-02-14 | 公開日 | 2008-08-19 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (1.34 Å) | 主引用文献 | Crystal structure and mutational analysis of Ca2+-independent type II antifreeze protein from longsnout poacher, Brachyopsis rostratus J.Mol.Biol., 382, 2008
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2CZQ
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![BU of 2czq by Molmil](/molmil-images/mine/2czq) | A novel cutinase-like protein from Cryptococcus sp. | 分子名称: | 1,2-ETHANEDIOL, CITRIC ACID, cutinase-like protein | 著者 | Masaki, K, Kamini, N.R, Ikeda, H, Iefuji, H, Kondo, H, Suzuki, M, Tsuda, S. | 登録日 | 2005-07-14 | 公開日 | 2006-07-14 | 最終更新日 | 2012-06-13 | 実験手法 | X-RAY DIFFRACTION (1.05 Å) | 主引用文献 | Crystal structure and enhanced activity of a cutinase-like enzyme from Cryptococcus sp. strain S-2 Proteins, 77, 2009
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1IC4
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![BU of 1ic4 by Molmil](/molmil-images/mine/1ic4) | CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD32A)-HEN LYSOZYME COMPLEX | 分子名称: | IGG1 FAB CHAIN H, LYSOZYME BINDING IG KAPPA CHAIN, LYSOZYME C | 著者 | Shiroishi, M, Yokota, A, Tsumoto, K, Kondo, H, Nishimiya, Y, Horii, K, Matsushima, M, Ogasahara, K, Yutani, K, Kumagai, I. | 登録日 | 2001-03-30 | 公開日 | 2001-07-18 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complex. J.Biol.Chem., 276, 2001
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1I42
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![BU of 1i42 by Molmil](/molmil-images/mine/1i42) | NMR STRUCTURE OF THE UBX DOMAIN FROM P47 | 分子名称: | P47 | 著者 | Yuan, X, Shaw, A, Zhang, X, Kondo, H, Lally, J, Freemont, P.S, Matthews, S. | 登録日 | 2001-02-19 | 公開日 | 2001-08-29 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure and interaction surface of the C-terminal domain from p47: a major p97-cofactor involved in SNARE disassembly. J.Mol.Biol., 311, 2001
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1ISP
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![BU of 1isp by Molmil](/molmil-images/mine/1isp) | Crystal structure of Bacillus subtilis lipase at 1.3A resolution | 分子名称: | GLYCEROL, lipase | 著者 | Kawasaki, K, Kondo, H, Suzuki, M, Ohgiya, S, Tsuda, S. | 登録日 | 2001-12-19 | 公開日 | 2002-12-19 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Alternate conformations observed in catalytic serine of Bacillus subtilis lipase determined at 1.3 A resolution. Acta Crystallogr.,Sect.D, 58, 2002
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1IT7
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![BU of 1it7 by Molmil](/molmil-images/mine/1it7) | Crystal structure of archaeosine tRNA-guanine transglycosylase complexed with guanine | 分子名称: | Archaeosine tRNA-guanine transglycosylase, GUANINE, MAGNESIUM ION, ... | 著者 | Ishitani, R, Nureki, O, Fukai, S, Kijimoto, T, Nameki, N, Watanabe, M, Kondo, H, Sekine, M, Okada, N, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2002-01-11 | 公開日 | 2002-05-22 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal structure of archaeosine tRNA-guanine transglycosylase. J.Mol.Biol., 318, 2002
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1IQ8
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![BU of 1iq8 by Molmil](/molmil-images/mine/1iq8) | Crystal Structure of archaeosine tRNA-guanine transglycosylase from Pyrococcus horikoshii | 分子名称: | ARCHAEOSINE TRNA-GUANINE TRANSGLYCOSYLASE, MAGNESIUM ION, ZINC ION | 著者 | Ishitani, R, Nureki, O, Fukai, S, Kijimoto, T, Nameki, N, Watanabe, M, Kondo, H, Sekine, M, Okada, N, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2001-07-09 | 公開日 | 2002-05-22 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of archaeosine tRNA-guanine transglycosylase. J.Mol.Biol., 318, 2002
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1IC7
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![BU of 1ic7 by Molmil](/molmil-images/mine/1ic7) | CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD32A99A)-HEN LYSOZYME COMPLEX | 分子名称: | IGG1 FAB CHAIN H, LYSOZYME BINDING IG KAPPA CHAIN, LYSOZYME C | 著者 | Shiroishi, M, Yokota, A, Tsumoto, K, Kondo, H, Nishimiya, Y, Horii, K, Matsushima, M, Ogasahara, K, Yutani, K, Kumagai, I. | 登録日 | 2001-03-30 | 公開日 | 2001-07-18 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complex. J.Biol.Chem., 276, 2001
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1IC5
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![BU of 1ic5 by Molmil](/molmil-images/mine/1ic5) | CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD99A)-HEN LYSOZYME COMPLEX | 分子名称: | IGG1 FAB CHAIN H, LYSOZYME BINDING IG KAPPA CHAIN, LYSOZYME C | 著者 | Shiroishi, M, Yokota, A, Tsumoto, K, Kondo, H, Nishimiya, Y, Horii, K, Matsushima, M, Ogasahara, K, Yutani, K, Kumagai, I. | 登録日 | 2001-03-30 | 公開日 | 2001-07-18 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complex. J.Biol.Chem., 276, 2001
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1IT8
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![BU of 1it8 by Molmil](/molmil-images/mine/1it8) | Crystal structure of archaeosine tRNA-guanine transglycosylase from Pyrococcus horikoshii complexed with archaeosine precursor, preQ0 | 分子名称: | 2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBONITRILE, MAGNESIUM ION, ZINC ION, ... | 著者 | Ishitani, R, Nureki, O, Fukai, S, Kijimoto, T, Nameki, N, Watanabe, M, Kondo, H, Sekine, M, Okada, N, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2002-01-11 | 公開日 | 2002-05-22 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structure of archaeosine tRNA-guanine transglycosylase. J.Mol.Biol., 318, 2002
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1R7R
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![BU of 1r7r by Molmil](/molmil-images/mine/1r7r) | The crystal structure of murine p97/VCP at 3.6A | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase | 著者 | Huyton, T, Pye, V.E, Briggs, L.C, Flynn, T.C, Beuron, F, Kondo, H, Ma, J, Zhang, X, Freemont, P.S. | 登録日 | 2003-10-22 | 公開日 | 2003-12-16 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (3.6 Å) | 主引用文献 | The crystal structure of murine p97/VCP at 3.6A J.Struct.Biol., 144, 2003
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1VAZ
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![BU of 1vaz by Molmil](/molmil-images/mine/1vaz) | Solution structures of the p47 SEP domain | 分子名称: | NSFL1 cofactor p47 | 著者 | Yuan, X, Simpson, P, Mckeown, C, Kondo, H, Uchiyama, K, Wallis, R, Dreveny, I, Keetch, C, Zhang, X, Robinson, C, Freemont, P, Matthews, S. | 登録日 | 2004-02-20 | 公開日 | 2004-04-06 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure, dynamics and interactions of p47, a major adaptor of the AAA ATPase, p97. Embo J., 23, 2004
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1V92
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![BU of 1v92 by Molmil](/molmil-images/mine/1v92) | Solution structure of the UBA domain from p47, a major cofactor of the AAA ATPase p97 | 分子名称: | NSFL1 cofactor p47 | 著者 | Yuan, X, Simpson, P, Mckeown, C, Kondo, H, Uchiyama, K, Wallis, R, Dreveny, I, Keetch, C, Zhang, X, Robinson, C, Freemont, P, Matthews, S. | 登録日 | 2004-01-19 | 公開日 | 2004-04-06 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure, dynamics and interactions of p47, a major adaptor of the AAA ATPase, p97 Embo J., 23, 2004
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1S3S
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![BU of 1s3s by Molmil](/molmil-images/mine/1s3s) | Crystal structure of AAA ATPase p97/VCP ND1 in complex with p47 C | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)- ATPase p97 subunit) (Valosin containing protein) (VCP) [Contains: Valosin], p47 protein | 著者 | Dreveny, I, Kondo, H, Uchiyama, K, Shaw, A, Zhang, X, Freemont, P.S. | 登録日 | 2004-01-14 | 公開日 | 2004-03-30 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structural basis of the interaction between the AAA ATPase p97/VCP and its adaptor protein p47. Embo J., 23, 2004
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6JK5
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![BU of 6jk5 by Molmil](/molmil-images/mine/6jk5) | Ca2+-dependent type II antifreeze protein (Ca2+-free form) | 分子名称: | SULFATE ION, Type II antifreeze protein | 著者 | Arai, T, Tsuda, S, Kondo, H, Nishimiya, Y. | 登録日 | 2019-02-27 | 公開日 | 2019-06-26 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.25 Å) | 主引用文献 | Calcium-Binding Generates the Semi-Clathrate Waters on a Type II Antifreeze Protein to Adsorb onto an Ice Crystal Surface. Biomolecules, 9, 2019
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