6KIQ
 
 | | Complex of yeast cytoplasmic dynein MTBD-High and MT with DTT | | Descriptor: | Alpha tubulin, Dynein heavy chain, cytoplasmic, ... | | Authors: | Komori, Y, Nishida, N, Shimada, I, Kikkawa, M. | | Deposit date: | 2019-07-19 | | Release date: | 2020-03-04 | | Last modified: | 2024-03-27 | | Method: | ELECTRON MICROSCOPY (3.62 Å) | | Cite: | Structural basis for two-way communication between dynein and microtubules.
Nat Commun, 11, 2020
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6KIO
 | | Complex of yeast cytoplasmic dynein MTBD-High and MT without DTT | | Descriptor: | Dynein heavy chain, cytoplasmic, Tubulin alpha-1A chain, ... | | Authors: | Komori, Y, Nishida, N, Shimada, I, Kikkawa, M. | | Deposit date: | 2019-07-19 | | Release date: | 2020-03-04 | | Last modified: | 2024-11-06 | | Method: | ELECTRON MICROSCOPY (3.94 Å) | | Cite: | Structural basis for two-way communication between dynein and microtubules.
Nat Commun, 11, 2020
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9L7M
 | | Nucleotide-free kinesin-1 motor domain bound to the microtubule | | Descriptor: | GUANOSINE-5'-TRIPHOSPHATE, Kinesin-1 heavy chain, MAGNESIUM ION, ... | | Authors: | Makino, T, Komori, Y, Yanagisawa, H, Tomishige, M, Kikkawa, M. | | Deposit date: | 2024-12-26 | | Release date: | 2025-04-23 | | Last modified: | 2025-05-21 | | Method: | ELECTRON MICROSCOPY (3.48 Å) | | Cite: | Tension-induced suppression of allosteric conformational changes coordinates kinesin-1 stepping.
J.Cell Biol., 224, 2025
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9IWN
 | | X-ray structure of human PPARalpha ligand binding domain-intrinsic fatty acid (E. coli origin)-PGC1alpha coactivator peptide co-crystals obtained by cross-seeding | | Descriptor: | GLYCEROL, PALMITIC ACID, Peroxisome proliferator-activated receptor alpha, ... | | Authors: | Kamata, S, Honda, A, Yashiro, S, Komori, Y, Shimamura, A, Hosoda, A, Oyama, T, Ishii, I. | | Deposit date: | 2024-07-25 | | Release date: | 2025-05-07 | | Method: | X-RAY DIFFRACTION (1.59 Å) | | Cite: | Competitive Ligand-Induced Recruitment of Coactivators to Specific PPAR alpha / delta / gamma Ligand-Binding Domains Revealed by Dual-Emission FRET and X-Ray Diffraction of Cocrystals.
Antioxidants, 14, 2025
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9IWL
 | | X-ray structure of human PPARalpha ligand binding domain-intrinsic fatty acid (E. coli origin)-CBP coactivator peptide co-crystals obtained by cross-seeding | | Descriptor: | CREB-binding protein, GLYCEROL, PALMITIC ACID, ... | | Authors: | Kamata, S, Honda, A, Yashiro, S, Komori, Y, Shimamura, A, Hosoda, A, Oyama, T, Ishii, I. | | Deposit date: | 2024-07-25 | | Release date: | 2025-05-07 | | Method: | X-RAY DIFFRACTION (2.09 Å) | | Cite: | Competitive Ligand-Induced Recruitment of Coactivators to Specific PPAR alpha / delta / gamma Ligand-Binding Domains Revealed by Dual-Emission FRET and X-Ray Diffraction of Cocrystals.
Antioxidants, 14, 2025
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9IWM
 | | X-ray structure of human PPARalpha ligand binding domain-GW7647-TRAP220 coactivator peptide co-crystals obtained by cross-seeding | | Descriptor: | 2-[(4-{2-[(4-cyclohexylbutyl)(cyclohexylcarbamoyl)amino]ethyl}phenyl)sulfanyl]-2-methylpropanoic acid, GLYCEROL, Mediator of RNA polymerase II transcription subunit 1, ... | | Authors: | Kamata, S, Honda, A, Yashiro, S, Komori, Y, Shimamura, A, Hosoda, A, Oyama, T, Ishii, I. | | Deposit date: | 2024-07-25 | | Release date: | 2025-05-07 | | Method: | X-RAY DIFFRACTION (1.39 Å) | | Cite: | Competitive Ligand-Induced Recruitment of Coactivators to Specific PPAR alpha / delta / gamma Ligand-Binding Domains Revealed by Dual-Emission FRET and X-Ray Diffraction of Cocrystals.
Antioxidants, 14, 2025
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9IWO
 | | X-ray structure of human PPARalpha ligand binding domain-GW7647-PGC1alpha coactivator peptide co-crystals obtained by cross-seeding | | Descriptor: | 2-[(4-{2-[(4-cyclohexylbutyl)(cyclohexylcarbamoyl)amino]ethyl}phenyl)sulfanyl]-2-methylpropanoic acid, Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha | | Authors: | Kamata, S, Honda, A, Yashiro, S, Komori, Y, Shimamura, A, Hosoda, A, Oyama, T, Ishii, I. | | Deposit date: | 2024-07-25 | | Release date: | 2025-05-07 | | Method: | X-RAY DIFFRACTION (1.49 Å) | | Cite: | Competitive Ligand-Induced Recruitment of Coactivators to Specific PPAR alpha / delta / gamma Ligand-Binding Domains Revealed by Dual-Emission FRET and X-Ray Diffraction of Cocrystals.
Antioxidants, 14, 2025
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6KJO
 | | The microtubule-binding domains of yeast cytoplasmic dynein in the low affinity state | | Descriptor: | Dynein heavy chain, cytoplasmic | | Authors: | Nishida, N, Komori, Y, Takarada, O, Watanabe, A, Tamura, S, Kubo, S, Shimada, I, Kikkawa, M. | | Deposit date: | 2019-07-22 | | Release date: | 2020-03-18 | | Last modified: | 2024-11-13 | | Method: | SOLUTION NMR | | Cite: | Structural basis for two-way communication between dynein and microtubules.
Nat Commun, 11, 2020
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6KJN
 | | The microtubule-binding domains of yeast cytoplasmic dynein in the high affinity state | | Descriptor: | Dynein heavy chain, cytoplasmic | | Authors: | Nishida, N, Komori, Y, Takarada, O, Watanabe, A, Tamura, S, Kubo, S, Shimada, I, Kikkawa, M. | | Deposit date: | 2019-07-22 | | Release date: | 2020-03-18 | | Last modified: | 2024-10-16 | | Method: | SOLUTION NMR | | Cite: | Structural basis for two-way communication between dynein and microtubules.
Nat Commun, 11, 2020
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