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PDB: 62 results

2AUR
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BU of 2aur by Molmil
F97V (no ligand bound)
Descriptor: Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Bonham, M.A, Gibson, Q.H, Nichols, J.C, Royer Jr, W.E.
Deposit date:2005-08-28
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin
Biochemistry, 44, 2005
2AV3
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BU of 2av3 by Molmil
F97L- no ligand
Descriptor: Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Bonham, M.A, Gibson, Q.H, Nichols, J.C, Royer Jr, W.E.
Deposit date:2005-08-29
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin
Biochemistry, 44, 2005
1E2O
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BU of 1e2o by Molmil
CATALYTIC DOMAIN FROM DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE
Descriptor: DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE, SULFATE ION
Authors:Knapp, J.E, Mitchell, D.T, Yazdi, M.A, Ernst, S.R, Reed, L.J, Hackert, M.L.
Deposit date:1998-05-26
Release date:1998-12-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the truncated cubic core component of the Escherichia coli 2-oxoglutarate dehydrogenase multienzyme complex.
J.Mol.Biol., 280, 1998
1JZK
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BU of 1jzk by Molmil
Crystal Structure of Scapharca inaequivalvis HbI, I114F mutant (deoxy)
Descriptor: GLOBIN I - ARK SHELL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Gibson, Q.H, Cushing, L, Royer Jr, W.E.
Deposit date:2001-09-16
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Restricting the Ligand-Linked Heme Movement in Scapharca Dimeric Hemoglobin Reveals Tight Coupling between Distal and Proximal Contributions to Cooperativity.
Biochemistry, 40, 2001
1JWN
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BU of 1jwn by Molmil
Crystal Structure of Scapharca inaequivalvis HbI, I114F Mutant Ligated to Carbon Monoxide.
Descriptor: CARBON MONOXIDE, Globin I - Ark Shell, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Gibson, Q.H, Cushing, L, Royer Jr, W.E.
Deposit date:2001-09-04
Release date:2001-12-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Restricting the ligand-linked heme movement in Scapharca dimeric hemoglobin reveals tight coupling between distal and proximal contributions to cooperativity.
Biochemistry, 40, 2001
1JZL
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BU of 1jzl by Molmil
Crystal structure of Sapharca inaequivalvis HbI, I114M mutant ligated to carbon monoxide.
Descriptor: CARBON MONOXIDE, GLOBIN I - ARK SHELL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Gibson, Q.H, Cushing, L, Royer Jr, W.E.
Deposit date:2001-09-16
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Restricting the Ligand-Linked Heme Movement in Scapharca Dimeric Hemoglobin Reveals Tight Coupling between Distal and Proximal Contributions to Cooperativity.
Biochemistry, 40, 2001
1JZM
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BU of 1jzm by Molmil
Crystal Structure of Scapharca inaequivalvis HbI, I114M Mutant in the Absence of ligand.
Descriptor: GLOBIN I - ARK SHELL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Gibson, Q.H, Cushing, L, Royer Jr, W.E.
Deposit date:2001-09-16
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Restricting the Ligand-Linked Heme Movement in Scapharca Dimeric Hemoglobin Reveals Tight Coupling between Distal and Proximal Contributions to Cooperativity.
Biochemistry, 40, 2001
3G4W
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BU of 3g4w by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chlorobenzene bound to the XE4 cavity
Descriptor: CARBON MONOXIDE, GLOBIN-1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G46
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BU of 3g46 by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloroform bound to the XE4 cavity
Descriptor: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-03
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G4Q
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BU of 3g4q by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloroform bound to the XE4 cavity
Descriptor: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
1NWN
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BU of 1nwn by Molmil
Crystals of CO-HbI in which the structure was converted to its unligated state, and then converted back to its original CO-ligated state.
Descriptor: CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, globin I
Authors:Knapp, J.E, Royer JR, W.E.
Deposit date:2003-02-06
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ligand-linked structural transitions in crystals of a cooperative dimeric hemoglobin.
Biochemistry, 42, 2003
1NXF
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BU of 1nxf by Molmil
Ligand-linked transitions of deoxyHbI crystals exposed to CO.
Descriptor: CARBON MONOXIDE, Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Royer JR, W.E.
Deposit date:2003-02-10
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ligand-linked structural transitions in crystals of a cooperative dimeric hemoglobin.
Biochemistry, 42, 2003
1C4T
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BU of 1c4t by Molmil
CATALYTIC DOMAIN FROM TRIMERIC DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE
Descriptor: PROTEIN (DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE), SULFATE ION
Authors:Knapp, J.E, Carroll, D, Lawson, J.E, Ernst, S.R, Reed, L.J, Hackert, M.L.
Deposit date:1999-09-22
Release date:2000-02-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Expression, purification, and structural analysis of the trimeric form of the catalytic domain of the Escherichia coli dihydrolipoamide succinyltransferase.
Protein Sci., 9, 2000
1NWI
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BU of 1nwi by Molmil
Crystal structure of CO-HbI transformed to an unligated state
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, globin I
Authors:Knapp, J.E, Royer JR, W.E.
Deposit date:2003-02-06
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ligand-linked structural transitions in crystals of a cooperative dimeric hemoglobin.
Biochemistry, 42, 2003
2Z8A
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BU of 2z8a by Molmil
Ligand Migration and Binding in The Dimeric Hemoglobin of Scapharca Inaequivalvis: I25W with CO Bound to HEME and in the Presence of 3 Atoms of XE
Descriptor: CARBON MONOXIDE, Globin-1, PHOSPHATE ION, ...
Authors:Knapp, J.E, Royer Jr, W.E, Nienhaus, K, Palladino, P, Nienhaus, G.U.
Deposit date:2007-09-04
Release date:2007-11-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Ligand Migration and Binding in the Dimeric Hemoglobin of Scapharca inaequivalvis
Biochemistry, 46, 2007
2Z85
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BU of 2z85 by Molmil
Ligand Migration and Binding in The Dimeric Hemoglobin of Scapharca Inaequivalvis: M37F Unliganded
Descriptor: Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Royer Jr, W.E, Nienhaus, K, Palladino, P, Nienhaus, G.U.
Deposit date:2007-09-02
Release date:2007-11-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Ligand Migration and Binding in the Dimeric Hemoglobin of Scapharca inaequivalvis
Biochemistry, 46, 2007
3G4Y
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BU of 3g4y by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloromethyl benzene bound to the XE4 cavity
Descriptor: (chloromethyl)benzene, CARBON MONOXIDE, GLOBIN-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G53
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BU of 3g53 by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloropropyl benzene bound to the XE4 cavity
Descriptor: (3-chloropropyl)benzene, CARBON MONOXIDE, Globin-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G4U
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BU of 3g4u by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and dichloropropane bound to the XE4 cavity
Descriptor: 1,3-dichloropropane, CARBON MONOXIDE, GLOBIN-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G4V
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BU of 3g4v by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloropentane bound to the XE4 cavity
Descriptor: 1-chloropentane, CARBON MONOXIDE, GLOBIN-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G52
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BU of 3g52 by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloroethyl benzene bound to the XE4 cavity
Descriptor: (2-chloroethyl)benzene, CARBON MONOXIDE, GLOBIN-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G4R
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BU of 3g4r by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to HEME and dichloroethane bound to the XE4 cavity
Descriptor: 1,2-DICHLOROETHANE, CARBON MONOXIDE, Globin-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
2GRF
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BU of 2grf by Molmil
Crystal structure of Scapharca inaequivalvis HBI, M37V mutant in the absence of ligand
Descriptor: Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Pahl, R, Srajer, V, Royer Jr, W.E.
Deposit date:2006-04-24
Release date:2006-05-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Allosteric action in real time: Time-resolved crystallographic studies of a cooperative dimeric hemoglobin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2AUP
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BU of 2aup by Molmil
Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin
Descriptor: Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Bonham, M.A, Gibson, Q.H, Nichols, J.C, Royer Jr, W.E.
Deposit date:2005-08-28
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin
Biochemistry, 44, 2005
2GRZ
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BU of 2grz by Molmil
5ns Photoproduct of the M37V mutant of Scapharca HbI
Descriptor: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Pahl, R, Srajer, V, Royer Jr, W.E.
Deposit date:2006-04-25
Release date:2006-05-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Allosteric action in real time: Time-resolved crystallographic studies of a cooperative dimeric hemoglobin.
Proc.Natl.Acad.Sci.Usa, 103, 2006

 

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