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PDB: 1653 results

3BGB
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BU of 3bgb by Molmil
HIV-1 protease in complex with a isobutyl decorated oligoamine
Descriptor: CHLORIDE ION, N,N'-(iminodiethane-2,1-diyl)bis[4-amino-N-(2-methylpropyl)benzenesulfonamide], Protease
Authors:Boettcher, J, Blum, A, Sammet, B, Heine, A, Diederich, W.E, Klebe, G.
Deposit date:2007-11-26
Release date:2008-09-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Achiral oligoamines as versatile tool for the development of aspartic protease inhibitors
Bioorg.Med.Chem., 16, 2008
3BLL
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BU of 3bll by Molmil
TGT mutant in complex with Boc-preQ1
Descriptor: GLYCEROL, Queuine tRNA-ribosyltransferase, ZINC ION, ...
Authors:Tidten, N, Heine, A, Reuter, K, Klebe, G.
Deposit date:2007-12-11
Release date:2008-12-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor
Plos One, 8, 2013
6SBH
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BU of 6sbh by Molmil
Human Carbonic Anhydrase II in complex with 4-pentylbenzenesulfonamide.
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 4-pentylbenzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-07-20
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Conformational Changes in Alkyl Chains Determine the Thermodynamic and Kinetic Binding Profiles of Carbonic Anhydrase Inhibitors.
Acs Chem.Biol., 15, 2020
6SBM
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BU of 6sbm by Molmil
Human Carbonic Anhydrase II in complex with 4-(pentyloxy)benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 4-pentoxybenzenesulfonamide, CITRATE ANION, ...
Authors:Gloeckner, S, Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-07-21
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Human Carbonic Anhydrase II in complex with 4-(pentyloxy)benzenesulfonamide
To Be Published
6SFU
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BU of 6sfu by Molmil
Human Carbonic Anhydrase II in complex with a furan-containing benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 4-(furan-2-ylmethylamino)benzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-08-02
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Human Carbonic Anhydrase II in complex with a furan-containing benzenesulfonamide
To Be Published
6SBL
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BU of 6sbl by Molmil
Human Carbonic Anhydrase II in complex with 4-hexylbenzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 4-hexylbenzenesulfonamide, CITRATE ANION, ...
Authors:Gloeckner, S, Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-07-21
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Human Carbonic Anhydrase II in complex with 4-hexylbenzenesulfonamide
To Be Published
6SDJ
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BU of 6sdj by Molmil
Human Carbonic Anhydrase II in complex with (R)-1-aminopropan-2-ol
Descriptor: (2~{R})-1-azanylpropan-2-ol, (4-CARBOXYPHENYL)(CHLORO)MERCURY, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-07-27
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:A Proof-of-Concept Fragment Screening of a Hit-Validated 96-Compounds Library against Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
6SEY
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BU of 6sey by Molmil
Human Carbonic Anhydrase II in complex with aliphatically substituted benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 4-(4-oxidanylbutyl)benzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-07-30
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Human Carbonic Anhydrase II in complex with aliphatically substituted benzenesulfonamide
To Be Published
6S9G
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BU of 6s9g by Molmil
Human Carbonic Anhydrase II in complex with fluorinated benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 2,3,5,6-tetrakis(fluoranyl)-4-propyl-benzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-07-12
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:The Influence of Varying Fluorination Patterns on the Thermodynamics and Kinetics of Benzenesulfonamide Binding to Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
6SDI
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BU of 6sdi by Molmil
Human Carbonic Anhydrase II in complex with an inhibitor soaked at a concentration of 0.01 mM
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
Authors:Gloeckner, S, Haake, M, Heine, A, Klebe, G.
Deposit date:2019-07-27
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Human Carbonic Anhydrase II in complex with an inhibitor soaked at a concentration of 0.01 mM
To Be Published
6SFQ
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BU of 6sfq by Molmil
Atomic resolution structure of human Carbonic Anhydrase II in complex with (R)-5-phenyloxazolidine-2,4-dione
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, (5R)-5-phenyl-1,3-oxazolidine-2,4-dione, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-08-02
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1 Å)
Cite:Atomic resolution structure of human Carbonic Anhydrase II in complex with (R)-5-phenyloxazolidine-2,4-dione
To Be Published
6SAC
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BU of 6sac by Molmil
N-terminal expression tag remainder of human Carbonic Anhydrase II covalently modified by fragment
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 1-(1,3-dimethyl-1H-pyrazol-5-yl)methanamine, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-07-16
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:A Proof-of-Concept Fragment Screening of a Hit-Validated 96-Compounds Library against Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
6SCB
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BU of 6scb by Molmil
Crystal structure of a shortened IpgC variant with two bound Magnesium and two bound Chlorine atoms each
Descriptor: CHLORIDE ION, Chaperone protein IpgC, MAGNESIUM ION
Authors:Ley, M, Heine, A, Klebe, G.
Deposit date:2019-07-24
Release date:2020-09-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of a shortened IpgC variant with two bound Magnesium and two bound Chlorine atoms each
To Be Published
6SDL
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BU of 6sdl by Molmil
Human Carbonic Anhydrase II in complex with (R)-N-(3-(1H-indol-1-yl)-2-methylpropyl)-4-sulfamoylbenzamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, (R)-N-(3-INDOL-1-YL-2-METHYL-PROPYL)-4-SULFAMOYL-BENZAMIDE, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Gerber, H.D, Heine, A, Klebe, G.
Deposit date:2019-07-28
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Human Carbonic Anhydrase II in complex with (R)-N-(3-(1H-indol-1-yl)-2-methylpropyl)-4-sulfamoylbenzamide
To Be Published
6SNX
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BU of 6snx by Molmil
Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with benzamide
Descriptor: BENZAMIDE, cAMP-dependent protein kinase catalytic subunit alpha
Authors:Oebbeke, M, Siefker, C, Heine, A, Klebe, G.
Deposit date:2019-08-27
Release date:2020-09-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021
6SPY
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BU of 6spy by Molmil
Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with 6-(morpholin-4-yl)pyridine-3-carboxamide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-morpholin-4-ylpyridine-3-carboxamide, DIMETHYL SULFOXIDE, ...
Authors:Oebbeke, M, Siefker, C, Heine, A, Klebe, G.
Deposit date:2019-09-03
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021
6T0M
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BU of 6t0m by Molmil
Cationic Trypsin in Complex with a D-Phe-Pro-diaminopyridine derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[[2,6-bis(azanyl)pyridin-4-yl]methyl]pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
Authors:Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-10-03
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Protein-Induced Change in Ligand Protonation during Trypsin and Thrombin Binding: Hint on Differences in Selectivity Determinants of Both Proteins?
J.Med.Chem., 63, 2020
6T3Q
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BU of 6t3q by Molmil
Thrombin in Complex with a D-Phe-Pro-2-aminopyridine derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(2-azanylpyridin-4-yl)methyl]pyrrolidine-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Ngo, K, Collins, C, Heine, A, Klebe, G.
Deposit date:2019-10-11
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Protein-Induced Change in Ligand Protonation during Trypsin and Thrombin Binding: Hint on Differences in Selectivity Determinants of Both Proteins?
J.Med.Chem., 63, 2020
6TDT
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BU of 6tdt by Molmil
Thrombin in Complex with a D-DiPhe-Pro-p-pyridine derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3,3-diphenyl-propanoyl]-~{N}-(pyridin-4-ylmethyl)pyrrolidine-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-11-10
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Protein-Induced Change in Ligand Protonation during Trypsin and Thrombin Binding: Hint on Differences in Selectivity Determinants of Both Proteins?
J.Med.Chem., 63, 2020
6T56
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BU of 6t56 by Molmil
Thrombin in Complex with Benzylamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BENZYLAMINE, GLYCEROL, ...
Authors:Ngo, K, Abazi, N, Heine, A, Klebe, G.
Deposit date:2019-10-15
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Thrombin in Complex with Benzylamine
To Be Published
6T7N
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BU of 6t7n by Molmil
Trypanosoma cruzi farnesyl diphosphate synthase in complex with IPP and Mn
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Farnesyl diphosphate synthase, MANGANESE (II) ION
Authors:Magari, F, Heine, A, Klebe, G.
Deposit date:2019-10-22
Release date:2020-11-18
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Trypanosoma cruzi farnesyl diphosphate synthase in complex with IPP and Mn
To Be Published
6T57
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BU of 6t57 by Molmil
Thrombin in Complex with a D-Phe-Pro-N-amidinopiperidine Derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(1-carbamimidoylpiperidin-4-yl)methyl]pyrrolidine-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Ngo, K, Abazi, N, Heine, A, Klebe, G.
Deposit date:2019-10-15
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Thrombin in Complex with a D-Phe-Pro-N-amidinopiperidine Derivative
To Be Published
6SPM
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BU of 6spm by Molmil
Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with 4-(trifluoromethyl)benzoic acid
Descriptor: 4-(trifluoromethyl)benzoic acid, DIMETHYL SULFOXIDE, METHANOL, ...
Authors:Oebbeke, M, Siefker, C, Heine, A, Klebe, G.
Deposit date:2019-09-02
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021
6T0P
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BU of 6t0p by Molmil
Cationic Trypsin in Complex with a D-Phe-Pro-2-aminopyridine derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(2-azanylpyridin-4-yl)methyl]pyrrolidine-2-carboxamide, CALCIUM ION, Cationic Trypsin, ...
Authors:Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-10-03
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Protein-Induced Change in Ligand Protonation during Trypsin and Thrombin Binding: Hint on Differences in Selectivity Determinants of Both Proteins?
J.Med.Chem., 63, 2020
6SPS
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BU of 6sps by Molmil
Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with 4-(trifluoromethyl)benzamide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(trifluoromethyl)benzamide, DIMETHYL SULFOXIDE, ...
Authors:Oebbeke, M, Siefker, C, Heine, A, Klebe, G.
Deposit date:2019-09-02
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021

225158

數據於2024-09-18公開中

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