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PDB: 61 results

6OK1
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Ltp2-ChsH2(DUF35) aldolase
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ChsH2(DUF35), ...
Authors:Kimber, M.S, Mallette, E, Aggett, R, Seah, S.Y.K.
Deposit date:2019-04-12
Release date:2019-06-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The steroid side-chain-cleaving aldolase Ltp2-ChsH2DUF35is a thiolase superfamily member with a radically repurposed active site.
J.Biol.Chem., 294, 2019
5SWC
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BU of 5swc by Molmil
The structure of the beta-carbonic anhydrase CcaA
Descriptor: CHLORIDE ION, Carbonic anhydrase, FORMIC ACID, ...
Authors:Kimber, M.S, McGurn, L, White, S.A.
Deposit date:2016-08-08
Release date:2016-10-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The structure, kinetics and interactions of the beta-carboxysomal beta-carbonic anhydrase, CcaA.
Biochem. J., 473, 2016
6MGC
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Escherichia coli KpsC, N-terminal domain
Descriptor: CHLORIDE ION, CYTIDINE-5'-MONOPHOSPHATE, Capsule polysaccharide export protein KpsC, ...
Authors:Doyle, L, Mallette, E, Kimber, M.S.
Deposit date:2018-09-13
Release date:2019-03-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Biosynthesis of a conserved glycolipid anchor for Gram-negative bacterial capsules.
Nat.Chem.Biol., 15, 2019
1HYB
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CRYSTAL STRUCTURE OF AN ACTIVE SITE MUTANT OF METHANOBACTERIUM THERMOAUTOTROPHICUM NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE, SULFATE ION
Authors:Saridakis, V, Christendat, D, Kimber, M.S, Edwards, A.M, Pai, E.F.
Deposit date:2001-01-18
Release date:2001-03-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes.
J.Biol.Chem., 276, 2001
6EF6
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BU of 6ef6 by Molmil
Structure of the microcompartment-associated aminopropanol kinase
Descriptor: (2R)-1-methoxypropan-2-amine, ACETATE ION, Aminoglycoside phosphotransferase, ...
Authors:Mallette, E, Kimber, M.S.
Deposit date:2018-08-16
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and kinetic characterization of (S)-1-amino-2-propanol kinase from the aminoacetone utilization microcompartment ofMycobacterium smegmatis.
J.Biol.Chem., 293, 2018
4N8X
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The structure of Nostoc sp. PCC 7120 CcmL
Descriptor: Carbon dioxide concentrating mechanism protein, SULFATE ION
Authors:Keeling, T.J, Kimber, M.S.
Deposit date:2013-10-18
Release date:2014-03-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Interactions and structural variability of beta-carboxysomal shell protein CcmL.
Photosynth.Res., 121, 2014
8VWR
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BU of 8vwr by Molmil
Structure of steroid hydratase from Comamonas testosteroni
Descriptor: Acyl dehydratase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Schroeter, K.L, Forrester, T.J.B, Kimber, M.S, Seah, S.Y.K.
Deposit date:2024-02-02
Release date:2024-07-17
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Shy is a proteobacterial steroid hydratase which catalyzes steroid side chain degradation without requiring a catalytically inert partner domain.
J.Biol.Chem., 300, 2024
7UTF
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Structure-Function characterization of an aldo-keto reductase involved in detoxification of the mycotoxin, deoxynivalenol
Descriptor: CITRATE ANION, Putative oxidoreductase, aryl-alcohol dehydrogenase like protein, ...
Authors:Abraham, N, Schroeter, K.L, Kimber, M.S, Seah, S.Y.K.
Deposit date:2022-04-26
Release date:2022-09-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-function characterization of an aldo-keto reductase involved in detoxification of the mycotoxin, deoxynivalenol.
Sci Rep, 12, 2022
3KWD
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Inactive truncation of the beta-carboxysomal gamma-Carbonic Anhydrase, CcmM, form 1
Descriptor: CHLORIDE ION, Carbon dioxide concentrating mechanism protein, ZINC ION
Authors:Pena, K.L, Kimber, M.S, Castel, S.E.
Deposit date:2009-12-01
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural basis of the oxidative activation of the carboxysomal {gamma}-carbonic anhydrase, CcmM.
Proc.Natl.Acad.Sci.USA, 107, 2010
4JN6
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Crystal Structure of the Aldolase-Dehydrogenase Complex from Mycobacterium tuberculosis HRv37
Descriptor: 4-hydroxy-2-oxovalerate aldolase, Acetaldehyde dehydrogenase, MANGANESE (II) ION, ...
Authors:Carere, J, McKenna, S.E, Kimber, M.S, Seah, S.Y.K.
Deposit date:2013-03-14
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Characterization of an Aldolase-Dehydrogenase Complex from the Cholesterol Degradation Pathway of Mycobacterium tuberculosis.
Biochemistry, 52, 2013
6CI8
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Structure of the microcompartment-associated aminoacetone dehydrogenase
Descriptor: 3-oxoacyl-[acyl-carrier-protein] reductase, CHLORIDE ION
Authors:Mallette, E, Kimber, M.S.
Deposit date:2018-02-23
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and Kinetics of the S-(+)-1-Amino-2-propanol Dehydrogenase from the RMM Microcompartment of Mycobacterium smegmatis.
Biochemistry, 57, 2018
6CI9
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RMM microcompartment-associated aminopropanol dehydrogenase NADP + aminoacetone holo-structure
Descriptor: 1-aminopropan-2-one, 3-oxoacyl-[acyl-carrier-protein] reductase, CHLORIDE ION, ...
Authors:Mallette, E, Kimber, M.S.
Deposit date:2018-02-23
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Kinetics of the S-(+)-1-Amino-2-propanol Dehydrogenase from the RMM Microcompartment of Mycobacterium smegmatis.
Biochemistry, 57, 2018
8CSE
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BU of 8cse by Molmil
WbbB in complex with alpha-Rha-(1-3)-beta-GlcNAc acceptor
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, N-(8-hydroxyoctyl)-4-methoxybenzamide, N-acetyl glucosaminyl transferase, ...
Authors:Forrester, T.J.B, Kimber, M.S.
Deposit date:2022-05-12
Release date:2022-11-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
8CSD
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WbbB D232C Kdo adduct
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, CHLORIDE ION, CYTIDINE-5'-MONOPHOSPHATE, ...
Authors:Forrester, T.J.B, Kimber, M.S.
Deposit date:2022-05-12
Release date:2022-11-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
8CSB
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WbbB D232N in complex with CMP-beta-Kdo
Descriptor: CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-BETA-D-GULO-OCT-2-ULO-PYRANOSONIC ACID, CYTIDINE-5'-MONOPHOSPHATE, N-acetyl glucosaminyl transferase, ...
Authors:Forrester, T.J.B, Kimber, M.S.
Deposit date:2022-05-12
Release date:2022-11-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
8CSF
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BU of 8csf by Molmil
WbbB D232C-Kdo adduct + alpha-Rha(1,3)GlcNAc ternary complex
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, CYTIDINE-5'-MONOPHOSPHATE, N-acetyl glucosaminyl transferase, ...
Authors:Forrester, T.J.B, Kimber, M.S.
Deposit date:2022-05-12
Release date:2022-11-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
8CSC
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BU of 8csc by Molmil
WbbB D232N-Kdo adduct
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, CHLORIDE ION, CYTIDINE-5'-MONOPHOSPHATE, ...
Authors:Forrester, T.J.B, Kimber, M.S.
Deposit date:2022-05-12
Release date:2022-11-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
5CGZ
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BU of 5cgz by Molmil
Crystal structure of GalB, the 4-carboxy-2-hydroxymuconate hydratase, from Pseuodomonas putida KT2440
Descriptor: 4-oxalmesaconate hydratase, GLYCEROL, ZINC ION
Authors:Mazurkewich, S, Brott, A.S, Kimber, M.S, Seah, S.Y.K.
Deposit date:2015-07-09
Release date:2016-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Structural and Kinetic Characterization of the 4-Carboxy-2-hydroxymuconate Hydratase from the Gallate and Protocatechuate 4,5-Cleavage Pathways of Pseudomonas putida KT2440.
J.Biol.Chem., 291, 2016
5DKO
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BU of 5dko by Molmil
The structure of Escherichia coli ZapD
Descriptor: Cell division protein ZapD, SULFATE ION
Authors:Wroblewski, C, Kimber, M.S.
Deposit date:2015-09-03
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and Mutational Analyses of Escherichia coli ZapD Reveal Charged Residues Involved in FtsZ Filament Bundling.
J.Bacteriol., 198, 2016
5L38
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The structure of the hexagonal shell protein MSM0272 from the RMM microcompartment
Descriptor: CHLORIDE ION, MSM0272 - RMM microcompartment shell protein, SODIUM ION
Authors:Mallette, E, Kimber, M.S.
Deposit date:2016-08-03
Release date:2016-12-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
5L37
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The structure of the pentameric shell protein MSM0273 from the RMM microcompartment
Descriptor: MSM0273
Authors:Mallette, E, Kimber, M.S.
Deposit date:2016-08-03
Release date:2016-12-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
5L39
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The structure of the fused permuted hexameric shell protein MSM0275 from the RMM microcompartment
Descriptor: CHLORIDE ION, RMM microcompartment shell protein MSM0275
Authors:Mallette, E, Kimber, M.S.
Deposit date:2016-08-03
Release date:2016-12-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
3GGP
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BU of 3ggp by Molmil
Crystal structure of prephenate dehydrogenase from A. aeolicus in complex with hydroxyphenyl propionate and NAD+
Descriptor: CHLORIDE ION, HYDROXYPHENYL PROPIONIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Sun, W, Shahinas, D, Kimber, M.S, Christendat, D.
Deposit date:2009-03-01
Release date:2009-03-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Crystal Structure of Aquifex aeolicus Prephenate Dehydrogenase Reveals the Mode of Tyrosine Inhibition.
J.Biol.Chem., 284, 2009
3SSQ
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BU of 3ssq by Molmil
CcmK2 - form 1 dodecamer
Descriptor: CHLORIDE ION, Carbon dioxide concentrating mechanism protein, GLYCEROL
Authors:Samborska, B, Kimber, M.S.
Deposit date:2011-07-08
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A CcmK2 double layer is the dominant architectural feature of the beta-carboxysomal shell facet
Structure, 2012
5FA0
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BU of 5fa0 by Molmil
The structure of the beta-3-deoxy-D-manno-oct-2-ulosonic acid transferase domain from WbbB
Descriptor: CHLORIDE ION, Putative N-acetyl glucosaminyl transferase
Authors:Mallette, E, Ovchinnikova, O.G, Whitfield, C, Kimber, M.S.
Deposit date:2015-12-10
Release date:2016-05-18
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Bacterial beta-Kdo glycosyltransferases represent a new glycosyltransferase family (GT99).
Proc. Natl. Acad. Sci. U.S.A., 113, 2016

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