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PDB: 705 件

1B8U
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MALATE DEHYDROGENASE FROM AQUASPIRILLUM ARCTICUM
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, OXALOACETATE ION, PROTEIN (MALATE DEHYDROGENASE)
著者Kim, S.Y, Hwang, K.Y, Kim, S.-H, Han, Y.S, Cho, Y.
登録日1999-02-02
公開日1999-07-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for cold adaptation. Sequence, biochemical properties, and crystal structure of malate dehydrogenase from a psychrophile Aquaspirillium arcticum.
J.Biol.Chem., 274, 1999
4KDI
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Crystal structure of p97/VCP N in complex with OTU1 UBXL
分子名称: Transitional endoplasmic reticulum ATPase, Ubiquitin thioesterase OTU1
著者Kim, S.J, Kim, E.E.
登録日2013-04-25
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural Basis for Ovarian Tumor Domain-containing Protein 1 (OTU1) Binding to p97/Valosin-containing Protein (VCP).
J.Biol.Chem., 289, 2014
1B8P
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MALATE DEHYDROGENASE FROM AQUASPIRILLUM ARCTICUM
分子名称: PROTEIN (MALATE DEHYDROGENASE)
著者Kim, S.Y, Hwang, K.Y, Kim, S.-H, Han, Y.S, Cho, Y.
登録日1999-02-02
公開日1999-07-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for cold adaptation. Sequence, biochemical properties, and crystal structure of malate dehydrogenase from a psychrophile Aquaspirillium arcticum.
J.Biol.Chem., 274, 1999
4ZTT
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Crystal structures of ferritin mutants reveal diferric-peroxo intermediates
分子名称: FE (II) ION, FE (III) ION, GLYCEROL, ...
著者Kim, S, Park, Y.H, Jung, S.W, Seok, J.H, Chung, Y.B, Lee, D.B, Gowda, G, Lee, J.H, Han, H.R, Cho, A.E, Lee, C, Chung, M.S, Kim, K.H.
登録日2015-05-15
公開日2016-06-15
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria.
J. Mol. Biol., 428, 2016
1B8V
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Malate dehydrogenase from Aquaspirillum arcticum
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (MALATE DEHYDROGENASE)
著者Kim, S.Y, Hwang, K.Y, Kim, S.H, Han, Y.S, Cho, Y.
登録日1999-02-02
公開日1999-07-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for cold adaptation. Sequence, biochemical properties, and crystal structure of malate dehydrogenase from a psychrophile Aquaspirillium arcticum.
J.Biol.Chem., 274, 1999
7C1X
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Unliganded structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
分子名称: PfkB-like carbohydrate kinase family protein, SODIUM ION
著者Kim, S.H, Rhee, S.
登録日2020-05-06
公開日2020-11-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.38942838 Å)
主引用文献Structural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.
Nucleic Acids Res., 49, 2021
6KD7
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Crystal structure of geranylgeranyl pyrophosphate synthase
分子名称: GLYCEROL, MAGNESIUM ION, PYROPHOSPHATE, ...
著者Kim, S, Kim, K.-J.
登録日2019-07-01
公開日2019-09-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of geranylgeranyl pyrophosphate synthase (crtE) from Nonlabens dokdonensis DSW-6.
Biochem.Biophys.Res.Commun., 518, 2019
7VG9
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Crystal structure of phosphotransbutyrylase from Clostridium acetobutylicum
分子名称: Phosphate butyryltransferase, SULFATE ION
著者Kim, S, Kim, K.-J.
登録日2021-09-15
公開日2021-10-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Crystal structure and molecular mechanism of phosphotransbutyrylase from Clostridium acetobutylicum .
J Microbiol Biotechnol., 31, 2021
7C1Z
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ATP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PfkB-like carbohydrate kinase family protein, ...
著者Kim, S.H, Rhee, S.
登録日2020-05-06
公開日2020-11-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.09617043 Å)
主引用文献Structural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.
Nucleic Acids Res., 49, 2021
2ESB
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Crystal structure of human DUSP18
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, Dual specificity protein phosphatase 18
著者Kim, S.J, Ryu, S.E, Jeong, D.G, Cho, Y.H, Yoon, T.S, Kim, J.H.
登録日2005-10-25
公開日2006-06-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of human DSP18, a member of the dual-specificity protein tyrosine phosphatase family.
Acta Crystallogr.,Sect.D, 62, 2006
3OJE
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Crystal Structure of the Bacillus cereus Enoyl-Acyl Carrier Protein Reductase (Apo form)
分子名称: Enoyl-[acyl-carrier-protein] reductase (FabL) (NADPH)
著者Kim, S.J, Ha, B.H, Kim, K.H, Hong, S.K, Suh, S.W, Kim, E.E.
登録日2010-08-22
公開日2010-09-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.02 Å)
主引用文献Dimeric and tetrameric forms of enoyl-acyl carrier protein reductase from Bacillus cereus
Biochem.Biophys.Res.Commun., 400, 2010
5C6F
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Crystal structures of ferritin mutants reveal side-on binding to diiron and end-on cleavage of oxygen
分子名称: Bacterial non-heme ferritin, FE (III) ION, IMIDAZOLE
著者Kim, S, Kim, K.H, Seok, J.H, Park, Y.H, Jung, S.W, Chung, Y.B, Lee, D.B, Lee, J.H, Han, K.R, Cho, A.E, Lee, C, Chung, M.S.
登録日2015-06-23
公開日2016-07-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria.
J. Mol. Biol., 428, 2016
3OJF
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Crystal Structure of the Bacillus cereus Enoyl-Acyl Carrier Protein Reductase with NADP+ and indole naphthyridinone (Complex form)
分子名称: (2E)-N-[(1,2-dimethyl-1H-indol-3-yl)methyl]-N-methyl-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)prop-2-enamide, Enoyl-[acyl-carrier-protein] reductase (FabL) (NADPH), NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Kim, S.J, Ha, B.H, Kim, K.H, Hong, S.K, Suh, S.W, Kim, E.E.
登録日2010-08-22
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Dimeric and tetrameric forms of enoyl-acyl carrier protein reductase from Bacillus cereus
Biochem.Biophys.Res.Commun., 400, 2010
6Q21
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MOLECULAR SWITCH FOR SIGNAL TRANSDUCTION: STRUCTURAL DIFFERENCES BETWEEN ACTIVE AND INACTIVE FORMS OF PROTOONCOGENIC RAS PROTEINS
分子名称: C-H-RAS P21 PROTEIN CATALYTIC DOMAIN, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
著者Kim, S.-H.
登録日1992-07-27
公開日1992-07-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Molecular switch for signal transduction: structural differences between active and inactive forms of protooncogenic ras proteins.
Science, 247, 1990
7C1Y
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Pseudouridine and ADP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
分子名称: 5-[(2~{S},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1~{H}-pyrimidine-2,4-dione, ADENOSINE-5'-DIPHOSPHATE, PfkB-like carbohydrate kinase family protein, ...
著者Kim, S.H, Rhee, S.
登録日2020-05-06
公開日2020-11-18
最終更新日2021-06-02
実験手法X-RAY DIFFRACTION (2.083426 Å)
主引用文献Structural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.
Nucleic Acids Res., 49, 2021
5B5V
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Structure of full-length MOB1b
分子名称: CHLORIDE ION, MOB kinase activator 1B, ZINC ION
著者KIM, S.-Y, Tachioka, Y, Mori, T, Hakoshima, T.
登録日2016-05-24
公開日2016-07-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.193 Å)
主引用文献Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
Sci Rep, 6, 2016
5B5W
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Crystal structure of MOB1-LATS1 NTR domain complex
分子名称: MOB kinase activator 1B, Serine/threonine-protein kinase LATS1, ZINC ION
著者KIM, S.-Y, Tachioka, Y, Mori, T, Hakoshima, T.
登録日2016-05-24
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.957 Å)
主引用文献Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
Sci Rep, 6, 2016
4PRL
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Crystal structure of D-lactate dehydrogenase with NAD+ from Lactobacillus jensenii
分子名称: 4-phosphoerythronate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Kim, S, Kim, K.J.
登録日2014-03-06
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure and thermodynamic properties of d-lactate dehydrogenase from Lactobacillus jensenii.
Int.J.Biol.Macromol., 68C, 2014
6VYP
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Crystal structure of the LSD1/CoREST histone demethylase bound to its nucleosome substrate
分子名称: DNA (191-MER), FLAVIN-ADENINE DINUCLEOTIDE, Histone H2A type 1, ...
著者Kim, S, Zhu, J, Eek, P, Yennawar, N, Song, T.
登録日2020-02-27
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.99 Å)
主引用文献Crystal Structure of the LSD1/CoREST Histone Demethylase Bound to Its Nucleosome Substrate.
Mol.Cell, 78, 2020
4PRK
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Crystal structure of D-lactate dehydrogenase (D-LDH) from Lactobacillus jensenii
分子名称: 4-phosphoerythronate dehydrogenase
著者Kim, S, Kim, K.J.
登録日2014-03-06
公開日2014-06-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure and thermodynamic properties of d-lactate dehydrogenase from Lactobacillus jensenii.
Int.J.Biol.Macromol., 68C, 2014
7VTF
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cytidine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
分子名称: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, Pseudouridine kinase
著者Kim, S.H, Rhee, S.
登録日2021-10-29
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.20203447 Å)
主引用文献Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7VTD
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Unliganded structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
分子名称: POTASSIUM ION, Pseudouridine kinase
著者Kim, S.H, Rhee, S.
登録日2021-10-29
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1505487 Å)
主引用文献Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7VTE
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uridine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
分子名称: POTASSIUM ION, Pseudouridine kinase, URIDINE
著者Kim, S.H, Rhee, S.
登録日2021-10-29
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15296578 Å)
主引用文献Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
5B6B
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Complex of LATS1 and phosphomimetic MOB1b
分子名称: CHLORIDE ION, MOB kinase activator 1B, Serine/threonine-protein kinase LATS1, ...
著者KIM, S.-Y, Tachioka, Y, Mori, T, Hakoshima, T.
登録日2016-05-26
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.536 Å)
主引用文献Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
Sci Rep, 6, 2016
1VLS
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LIGAND BINDING DOMAIN OF THE WILD-TYPE ASPARTATE RECEPTOR
分子名称: ASPARTATE RECEPTOR
著者Kim, S.-H, Yeh, J.I, Biemann, H.-P, Prive, G, Pandit, J, Koshland Junior, D.E.
登録日1996-09-17
公開日1997-04-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献High-resolution structures of the ligand binding domain of the wild-type bacterial aspartate receptor.
J.Mol.Biol., 262, 1996

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