Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 443 件

6IZE
DownloadVisualize
BU of 6ize by Molmil
Dimeric human TCTP
分子名称: Translationally-controlled tumor protein
著者Shin, D.H, Kim, M.S.
登録日2018-12-19
公開日2019-12-25
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Dimeric human TCTP
To Be Published
3TT7
DownloadVisualize
BU of 3tt7 by Molmil
Structure of ClpP from Bacillus subtilis in complex with DFP
分子名称: ATP-dependent Clp protease proteolytic subunit, DIISOPROPYL PHOSPHONATE
著者Lee, B.-G, Kim, M.K, Song, H.K.
登録日2011-09-14
公開日2011-12-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.558 Å)
主引用文献Structural insights into the conformational diversity of ClpP from Bacillus subtilis
Mol.Cells, 32, 2011
3TT6
DownloadVisualize
BU of 3tt6 by Molmil
Structure of ClpP from Bacillus subtilis in compressed state
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Lee, B.-G, Kim, M.K, Song, H.K.
登録日2011-09-14
公開日2011-12-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.592 Å)
主引用文献Structural insights into the conformational diversity of ClpP from Bacillus subtilis
Mol.Cells, 32, 2011
3MCD
DownloadVisualize
BU of 3mcd by Molmil
Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
分子名称: Cell division topological specificity factor
著者Kang, G.B, Song, H.E, Kim, M.K, Youn, H.S, Lee, J.G, An, J.Y, Jeon, H, Chun, J.S, Eom, S.H.
登録日2010-03-29
公開日2010-05-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Mol.Microbiol., 76, 2010
2PV6
DownloadVisualize
BU of 2pv6 by Molmil
HIV-1 gp41 Membrane Proximal Ectodomain Region peptide in DPC micelle
分子名称: Envelope glycoprotein
著者Sun, Z.-Y.J, Oh, K.J, Kim, M, Reinherz, E.L, Wagner, G.
登録日2007-05-09
公開日2008-03-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献HIV-1 broadly neutralizing antibody extracts its epitope from a kinked gp41 ectodomain region on the viral membrane
Immunity, 28, 2008
6IZB
DownloadVisualize
BU of 6izb by Molmil
Flexible loop truncated human TCTP
分子名称: Translationally-controlled tumor protein
著者Shin, D.H, Kim, M.S.
登録日2018-12-19
公開日2019-12-25
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Flexible loop truncated human TCTP
To Be Published
5XLN
DownloadVisualize
BU of 5xln by Molmil
Crystal structure of the TRS_UNE-T and 4EHP complex
分子名称: Eukaryotic translation initiation factor 4E type 2, Threonine--tRNA ligase, cytoplasmic
著者Hwang, J, Nguyen, L.T, Kim, M.H.
登録日2017-05-11
公開日2018-11-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A threonyl-tRNA synthetase-mediated translation initiation machinery.
Nat Commun, 10, 2019
5Y7D
DownloadVisualize
BU of 5y7d by Molmil
Crystal structure of human Endothelial-overexpressed LPS associated factor 1
分子名称: CHLORIDE ION, GLYCEROL, Protein CXorf40A, ...
著者Park, S.H, Kim, M.J, Park, J.S, Kim, H.J, Han, B.W.
登録日2017-08-17
公開日2018-08-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Crystal Structure of Human EOLA1 Implies Its Possibility of RNA Binding.
Molecules, 24, 2019
5Y16
DownloadVisualize
BU of 5y16 by Molmil
Crystal structure of human DUSP28(Y102H)
分子名称: CHLORIDE ION, Dual specificity phosphatase 28, PHOSPHATE ION
著者Ku, B, Kim, M, Kim, S.J, Ryu, S.E.
登録日2017-07-19
公開日2017-11-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Structural and biochemical analysis of atypically low dephosphorylating activity of human dual-specificity phosphatase 28
PLoS ONE, 12, 2017
5X3R
DownloadVisualize
BU of 5x3r by Molmil
Crystal structure of the SmcR complexed with QStatin
分子名称: 1-(5-bromanylthiophen-2-yl)sulfonylpyrazole, LuxR family transcriptional regulator, SULFATE ION
著者Jang, S.Y, Hwang, J, Kim, M.H.
登録日2017-02-07
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献QStatin, a Selective Inhibitor of Quorum Sensing inVibrioSpecies
MBio, 9, 2018
5Z0B
DownloadVisualize
BU of 5z0b by Molmil
Crystal structure of plasma-derived human serum albumin
分子名称: DI(HYDROXYETHYL)ETHER, LINOLEIC ACID, OCTANOIC ACID (CAPRYLIC ACID), ...
著者Park, J, Kim, M.-S, Shin, D.H.
登録日2017-12-19
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献The crystal structure of plasma-derived human serum albumin
To Be Published
3VSM
DownloadVisualize
BU of 3vsm by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
分子名称: GLYCEROL, Occlusion-derived virus envelope protein E66
著者Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
登録日2012-04-27
公開日2013-05-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
1ET5
DownloadVisualize
BU of 1et5 by Molmil
CRYSTAL STRUCTURE OF NITRITE REDUCTASE ASP98ASN MUTANT FROM ALCALIGENES FAECALIS S-6
分子名称: COPPER (II) ION, NITRITE REDUCTASE, ZINC ION
著者Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P.
登録日2000-04-12
公開日2000-08-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase.
J.Biol.Chem., 275, 2000
1ET8
DownloadVisualize
BU of 1et8 by Molmil
CRYSTAL STRUCTURE OF NITRITE REDUCTASE HIS255ASN MUTANT FROM ALCALIGENES FAECALIS
分子名称: COPPER (II) ION, NITRITE REDUCTASE, ZINC ION
著者Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P.
登録日2000-04-12
公開日2000-08-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase.
J.Biol.Chem., 275, 2000
1EJ2
DownloadVisualize
BU of 1ej2 by Molmil
Crystal structure of methanobacterium thermoautotrophicum nicotinamide mononucleotide adenylyltransferase with bound NAD+
分子名称: NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
著者Saridakis, V, Christendat, D, Kimber, M.S, Edwards, A.M, Pai, E.F, Midwest Center for Structural Genomics (MCSG), Northeast Structural Genomics Consortium (NESG)
登録日2000-02-29
公開日2001-03-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes.
J.Biol.Chem., 276, 2001
3VK9
DownloadVisualize
BU of 3vk9 by Molmil
Crystal structure of delta-class glutathione transferase from silkmoth
分子名称: GLYCEROL, Glutathione S-transferase delta
著者Kakuta, Y, Usuda, K, Higashiura, A, Suzuki, M, Nakagawa, A, Kimura, M, Yamamoto, K.
登録日2011-11-10
公開日2012-10-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase
Biochim.Biophys.Acta, 1820, 2012
3VVU
DownloadVisualize
BU of 3vvu by Molmil
Crystal structure of reconstructed bacterial ancestral NDK, Bac1
分子名称: Nucleoside diphosphate kinase
著者Nemoto, N, Miyazono, K, Kimura, M, Yokobori, S, Akanuma, S, Tanokura, M, Yamagishi, A.
登録日2012-07-27
公開日2013-06-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Experimental evidence for the thermophilicity of ancestral life
Proc.Natl.Acad.Sci.USA, 110, 2013
3VVT
DownloadVisualize
BU of 3vvt by Molmil
Crystal structure of reconstructed archaeal ancestral NDK, Arc1
分子名称: Nucleoside diphosphate kinase
著者Nemoto, N, Miyazono, K, Kimura, M, Yokobori, S, Akanuma, S, Tanokura, M, Yamagishi, A.
登録日2012-07-27
公開日2013-06-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Experimental evidence for the thermophilicity of ancestral life
Proc.Natl.Acad.Sci.USA, 110, 2013
4FXQ
DownloadVisualize
BU of 4fxq by Molmil
Full-length Certhrax toxin from Bacillus cereus in complex with Inhibitor P6
分子名称: 8-fluoro-2-(3-piperidin-1-ylpropanoyl)-1,3,4,5-tetrahydrobenzo[c][1,6]naphthyridin-6(2H)-one, CHLORIDE ION, Putative ADP-ribosyltransferase Certhrax, ...
著者Visschedyk, D.D, Dimov, S, Kimber, M.S, Park, H.W, Merrill, A.R.
登録日2012-07-03
公開日2012-09-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9599 Å)
主引用文献Certhrax Toxin, an Anthrax-related ADP-ribosyltransferase from Bacillus cereus.
J.Biol.Chem., 287, 2012
1VCZ
DownloadVisualize
BU of 1vcz by Molmil
Crystal structure of the RNase NT in complex with 5'-GMP
分子名称: GUANOSINE-5'-MONOPHOSPHATE, RNase NGR3
著者Kawano, S, Kakuta, Y, Kimura, M.
登録日2004-03-17
公開日2005-04-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of the Nicotiana glutinosa Ribonuclease NT in Complex with Nucleotide Monophosphates
to be published
5HNP
DownloadVisualize
BU of 5hnp by Molmil
The structure of the kdo-capped saccharide binding subunit of the O-12 specific ABC transporter, Wzt
分子名称: ABC transporter, CHLORIDE ION
著者Mallette, E, Mann, E, Whitfield, C, Kimber, M.S.
登録日2016-01-18
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Klebsiella pneumoniae O12 ATP-binding Cassette (ABC) Transporter Recognizes the Terminal Residue of Its O-antigen Polysaccharide Substrate.
J.Biol.Chem., 291, 2016
7D5R
DownloadVisualize
BU of 7d5r by Molmil
Structure of the Ca2+-bound C646A mutant of peptidylarginine deiminase type III (PAD3)
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Mashimo, R, Akimoto, M, Unno, M.
登録日2020-09-28
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.148 Å)
主引用文献Structures of human peptidylarginine deiminase type III provide insights into substrate recognition and inhibitor design.
Arch.Biochem.Biophys., 708, 2021
5L39
DownloadVisualize
BU of 5l39 by Molmil
The structure of the fused permuted hexameric shell protein MSM0275 from the RMM microcompartment
分子名称: CHLORIDE ION, RMM microcompartment shell protein MSM0275
著者Mallette, E, Kimber, M.S.
登録日2016-08-03
公開日2016-12-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
8CSF
DownloadVisualize
BU of 8csf by Molmil
WbbB D232C-Kdo adduct + alpha-Rha(1,3)GlcNAc ternary complex
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, CYTIDINE-5'-MONOPHOSPHATE, N-acetyl glucosaminyl transferase, ...
著者Forrester, T.J.B, Kimber, M.S.
登録日2022-05-12
公開日2022-11-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
8CSE
DownloadVisualize
BU of 8cse by Molmil
WbbB in complex with alpha-Rha-(1-3)-beta-GlcNAc acceptor
分子名称: CYTIDINE-5'-MONOPHOSPHATE, N-(8-hydroxyoctyl)-4-methoxybenzamide, N-acetyl glucosaminyl transferase, ...
著者Forrester, T.J.B, Kimber, M.S.
登録日2022-05-12
公開日2022-11-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon