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PDB: 87 件

4TX1
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The crystal structure of carbohydrate acetylesterase family member from Sinorhizobium meliloti
分子名称: Esterase
著者Kim, K, Kim, S.S, Pandian, R, Ngo, T.D.
登録日2014-07-02
公開日2014-12-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and biochemical characterization of a carbohydrate acetylesterase from Sinorhizobium meliloti 1021.
Febs Lett., 589, 2015
7N4Y
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BU of 7n4y by Molmil
The structure of bovine thyroglobulin with iodinated tyrosines
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kim, K, Clarke, O.B.
登録日2021-06-04
公開日2021-11-10
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献The structure of natively iodinated bovine thyroglobulin.
Acta Crystallogr D Struct Biol, 77, 2021
2L4M
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BU of 2l4m by Molmil
Solution structure of the Zbeta domain of human DAI and its binding modes to B- and Z-DNA
分子名称: Uncharacterized protein
著者Kim, K, Khayrutdinov, B.I, Jeon, Y.H, Kim, K.K.
登録日2010-10-08
公開日2011-04-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the Zbeta domain of human DNA-dependent activator of IFN-regulatory factors and its binding modes to B- and Z-DNA
Proc.Natl.Acad.Sci.USA, 2011
2FI7
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BU of 2fi7 by Molmil
Crystal Structure of PilF : Functional implication in the type 4 pilus biogenesis in Pseudomonas aeruginosa
分子名称: type 4 fimbrial biogenesis protein PilF
著者Kim, K.
登録日2005-12-28
公開日2006-06-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of PilF: functional implication in the type 4 pilus biogenesis in Pseudomonas aeruginosa
Biochem.Biophys.Res.Commun., 340, 2006
3E74
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BU of 3e74 by Molmil
Crystal structure of E. coli allantoinase with iron ions at the metal center
分子名称: Allantoinase, FE (III) ION
著者Kim, K.
登録日2008-08-17
公開日2009-02-24
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of metal-dependent allantoinase from Escherichia coli
J.Mol.Biol., 387, 2009
2HK1
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BU of 2hk1 by Molmil
Crystal structure of D-psicose 3-epimerase (DPEase) in the presence of D-fructose
分子名称: D-PSICOSE 3-EPIMERASE, D-fructose, MANGANESE (II) ION
著者Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S.
登録日2006-07-03
公開日2006-08-29
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes
J.Mol.Biol., 361, 2006
2HK0
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BU of 2hk0 by Molmil
Crystal structure of D-psicose 3-epimerase (DPEase) in the absence of substrate
分子名称: D-PSICOSE 3-EPIMERASE
著者Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S.
登録日2006-07-03
公開日2006-08-29
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes
J.Mol.Biol., 361, 2006
7CMX
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BU of 7cmx by Molmil
Isocitrate lyase from Bacillus cereus ATCC 14579
分子名称: Isocitrate lyase
著者Kim, K, Ki, D, Lee, S.H.
登録日2020-07-29
公開日2021-08-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Isocitrate lyase from Bacillus cereus ATCC 14579
To Be Published
7CMY
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BU of 7cmy by Molmil
Isocitrate lyase from Bacillus cereus ATCC 14579 in complex with Magnessium ion, glyoxylate, and succinate
分子名称: GLYOXYLIC ACID, Isocitrate lyase, MAGNESIUM ION, ...
著者Kim, K, Ki, D, Lee, S.H.
登録日2020-07-29
公開日2021-08-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Isocitrate lyase from Bacillus cereus ATCC 14579 in complex with Magnessium ion, glyoxylate, and succinate
To Be Published
2Q37
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BU of 2q37 by Molmil
Crystal structure of OHCU decarboxylase in the presence of (S)-allantoin
分子名称: 1-[(4S)-2,5-DIOXOIMIDAZOLIDIN-4-YL]UREA, OHCU decarboxylase
著者Kim, K.
登録日2007-05-30
公開日2007-06-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and functional basis for (s)-allantoin formation in the ureide pathway.
J.Biol.Chem., 282, 2007
5EJJ
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BU of 5ejj by Molmil
Crystal structure of UfSP from C.elegans
分子名称: Ufm1-specific protease
著者Kim, K, Ha, B, Kim, E.E.
登録日2015-11-02
公開日2017-01-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The MPN domain of Caenorhabditis elegans UfSP modulates both substrate recognition and deufmylation activity
Biochem. Biophys. Res. Commun., 476, 2016
7YIT
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BU of 7yit by Molmil
Molecular mechanism of biased signaling at the kappa opioid receptor
分子名称: Kappa-type opioid receptor, Nanobody39, Soluble cytochrome b562, ...
著者Kim, K, Che, T.
登録日2022-07-18
公開日2023-04-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Molecular mechanism of biased signaling at the kappa opioid receptor.
Nat Commun, 14, 2023
2KXX
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BU of 2kxx by Molmil
NMR Structure of Escherichia coli BamE, a Lipoprotein Component of the beta-Barrel Assembly Machinery Complex
分子名称: Small protein A
著者Kim, K, Okon, M, Escobar, E, Kang, H, McIntosh, L, Paetzel, M.
登録日2010-05-13
公開日2011-01-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Characterization of Escherichia coli BamE, a Lipoprotein Component of the beta-Barrel Assembly Machinery Complex.
Biochemistry, 50, 2011
8CS9
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BU of 8cs9 by Molmil
Composite reconstruction of Class 1 of the erythrocyte ankyrin-1 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ammonium transporter Rh type A, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-12
公開日2022-07-20
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CSW
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BU of 8csw by Molmil
Local refinement of protein 4.2 in Class 2 of erythrocyte ankyrin-1 complex
分子名称: Protein 4.2
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-13
公開日2022-07-20
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CRT
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BU of 8crt by Molmil
Local refinement of Rh trimer, glycophorin B and Band3-III transmembrane region, class 1a of erythrocyte ankyrin-1 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ammonium transporter Rh type A, Band 3 anion transport protein, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-11
公開日2022-07-20
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CSL
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BU of 8csl by Molmil
Sub-tomogram averaging of erythrocyte ankyrin-1 complex
分子名称: Ammonium transporter Rh type A, Ankyrin-1, Band 3 anion transport protein, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-12
公開日2022-07-20
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (25 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CSY
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BU of 8csy by Molmil
Local refinement of cytoplasmic domains of band3-I in class 2 of erythrocyte ankyrin-1 complex
分子名称: Band 3 anion transport protein
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-13
公開日2022-07-20
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CSX
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BU of 8csx by Molmil
Local refinement of RhAG/CE trimer in class 2 of erythrocyte ankyrin-1 complex
分子名称: Ammonium transporter Rh type A, Blood group Rh(CE) polypeptide, CHOLESTEROL, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-13
公開日2022-07-20
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CT2
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BU of 8ct2 by Molmil
Local refinement of AQP1 tetramer (C1; refinement mask included D1 of protein 4.2 and Ankyrin-1 AR1-5) in Class 2 of erythrocyte ankyrin-1 complex
分子名称: Aquaporin-1, CHOLESTEROL
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-13
公開日2022-07-20
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CRR
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BU of 8crr by Molmil
Local refinement of Band 3-III transmembrane domains, class 1 of erythrocyte ankyrin-1 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Band 3 anion transport protein, CHOLESTEROL, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-11
公開日2022-07-20
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CSV
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BU of 8csv by Molmil
Local refinement of Anykyrin-1 (N-terminal half of membrane binding domain) in Class 2 of erythrocyte ankyrin-1 complex
分子名称: Ankyrin-1, Band 3 anion transport protein
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-13
公開日2022-07-20
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CTE
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BU of 8cte by Molmil
Class 2 of erythrocyte ankyrin-1 complex (Composite map)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Ammonium transporter Rh type A, Ankyrin-1, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-14
公開日2022-07-20
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CRQ
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BU of 8crq by Molmil
Local refinement of Band 3-I transmembrane domains, class 1 of erythrocyte ankyrin-1 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Band 3 anion transport protein, CHOLESTEROL, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-11
公開日2022-07-20
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
8CT3
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BU of 8ct3 by Molmil
Local refinement of band3-I transmembrane region from class 2 of erythrocyte ankyrin-1 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Band 3 anion transport protein, CHOLESTEROL, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-13
公開日2022-07-20
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022

 

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