8K2Y
 
 | | Crystal structure of MucD | | Descriptor: | serine endoprotease DegP-like protein MucD | | Authors: | Kim, J.H, Park, H.H. | | Deposit date: | 2023-07-14 | | Release date: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | The structure of MucD from Pseudomonas syringae revealed N-terminal loop-mediated trimerization of HtrA-like serine protease.
Biochem.Biophys.Res.Commun., 688, 2023
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7CT6
 | | Crystal structure of GCL from Deinococcus metallilatus | | Descriptor: | Glyoxylate carboligase | | Authors: | Kim, J.H, Kim, J.S. | | Deposit date: | 2020-08-18 | | Release date: | 2021-08-25 | | Last modified: | 2024-11-13 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Glyoxylate carboligase-based whole-cell biotransformation of formaldehyde into ethylene glycol via glycolaldehyde.
Green Chem, 1, 2022
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4E89
 | | Crystal Structure of RnaseH from gammaretrovirus | | Descriptor: | CADMIUM ION, MAGNESIUM ION, RNase H | | Authors: | Kim, J.H, Kim, S.J. | | Deposit date: | 2012-03-19 | | Release date: | 2012-10-17 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Crystal structure of xenotropic murine leukaemia virus-related virus (XMRV) ribonuclease H
Biosci.Rep., 32, 2012
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8I01
 | | Crystal structure of Escherichia coli glyoxylate carboligase | | Descriptor: | 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ... | | Authors: | Kim, J.H, Kim, J.S. | | Deposit date: | 2023-01-10 | | Release date: | 2023-11-22 | | Last modified: | 2024-11-27 | | Method: | X-RAY DIFFRACTION (2.15 Å) | | Cite: | Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
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8I07
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8I08
 | | Crystal structure of Escherichia coli glyoxylate carboligase quadruple mutant | | Descriptor: | 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ... | | Authors: | Kim, J.H, Kim, J.S. | | Deposit date: | 2023-01-10 | | Release date: | 2023-11-22 | | Last modified: | 2024-05-08 | | Method: | X-RAY DIFFRACTION (1.91 Å) | | Cite: | Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
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8I05
 | | Crystal structure of Escherichia coli glyoxylate carboligase double mutant | | Descriptor: | 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ... | | Authors: | Kim, J.H, Kim, J.S. | | Deposit date: | 2023-01-10 | | Release date: | 2023-11-22 | | Last modified: | 2024-05-08 | | Method: | X-RAY DIFFRACTION (2.09 Å) | | Cite: | Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
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4TQ0
 | | Crystal structure of human ATG5-ATG16N69 | | Descriptor: | Autophagy protein 5, Autophagy-related protein 16-1 | | Authors: | Kim, J.H, Hong, S.B, Song, H.K. | | Deposit date: | 2014-06-10 | | Release date: | 2015-03-11 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.697 Å) | | Cite: | Insights into autophagosome maturation revealed by the structures of ATG5 with its interacting partners
Autophagy, 11, 2015
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4TQ1
 | | Crystal structure of human ATG5-TECAIR | | Descriptor: | Autophagy protein 5, Tectonin beta-propeller repeat-containing protein 1 | | Authors: | Kim, J.H, Hong, S.B, Song, H.K. | | Deposit date: | 2014-06-10 | | Release date: | 2015-03-11 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (1.802 Å) | | Cite: | Insights into autophagosome maturation revealed by the structures of ATG5 with its interacting partners
Autophagy, 11, 2015
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1UC7
 | | Crystal structure of DsbDgamma | | Descriptor: | Thiol:disulfide interchange protein dsbD | | Authors: | Kim, J.H, Kim, S.J, Jeong, D.G, Son, J.H, Ryu, S.E. | | Deposit date: | 2003-04-09 | | Release date: | 2004-04-27 | | Last modified: | 2024-10-23 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Crystal structure of DsbDgamma reveals the mechanism of redox potential shift and substrate specificity(1)
FEBS LETT., 543, 2003
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4XB0
 | | Structure of the Plk2 polo-box domain | | Descriptor: | CHLORIDE ION, PHOSPHATE ION, Serine/threonine-protein kinase PLK2 | | Authors: | Kim, J.H, Ku, B, Kim, S.J. | | Deposit date: | 2014-12-16 | | Release date: | 2015-05-06 | | Last modified: | 2024-04-03 | | Method: | X-RAY DIFFRACTION (2.701 Å) | | Cite: | Structural analysis of the polo-box domain of human Polo-like kinase 2
Proteins, 83, 2015
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7CXT
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5GRZ
 | | Crystal structure of disulfide-bonded diabody | | Descriptor: | diabody | | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | | Deposit date: | 2016-08-13 | | Release date: | 2016-10-12 | | Last modified: | 2024-10-16 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
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5GS2
 | | Crystal structure of diabody complex with repebody and MBP | | Descriptor: | Maltose-binding periplasmic protein, anti-MBP, anti-repebody, ... | | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | | Deposit date: | 2016-08-13 | | Release date: | 2016-10-12 | | Last modified: | 2024-11-13 | | Method: | X-RAY DIFFRACTION (3.592 Å) | | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
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5GRY
 | | Crystal structure of disulfide-bonded diabody | | Descriptor: | diabody | | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | | Deposit date: | 2016-08-12 | | Release date: | 2016-10-12 | | Last modified: | 2024-10-23 | | Method: | X-RAY DIFFRACTION (1.639 Å) | | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
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5GS1
 | | Crystal structure of homo-specific diabody | | Descriptor: | diabody, heavy chain, light chain | | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | | Deposit date: | 2016-08-13 | | Release date: | 2016-10-12 | | Last modified: | 2024-11-13 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
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5GS0
 | | Crystal structure of the complex of TLR3 and bi-specific diabody | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor 3, alpha-D-mannopyranose, ... | | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | | Deposit date: | 2016-08-13 | | Release date: | 2016-10-12 | | Last modified: | 2024-10-23 | | Method: | X-RAY DIFFRACTION (3.275 Å) | | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
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5GRV
 | | Crystal structure of homo-specific diabody | | Descriptor: | homo-specific diabody heavy chain, homo-specific diabody light chain | | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | | Deposit date: | 2016-08-12 | | Release date: | 2016-10-12 | | Last modified: | 2024-10-09 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
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5GS3
 | | Crystal structure of diabody | | Descriptor: | diabody protein | | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | | Deposit date: | 2016-08-13 | | Release date: | 2016-10-12 | | Last modified: | 2024-11-20 | | Method: | X-RAY DIFFRACTION (1.698 Å) | | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
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5GRX
 | | Crystal structure of disulfide-bonded diabody | | Descriptor: | diabody protein | | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | | Deposit date: | 2016-08-12 | | Release date: | 2016-10-12 | | Last modified: | 2024-10-09 | | Method: | X-RAY DIFFRACTION (2.002 Å) | | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
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5GRW
 | | Crystal structure of homo-specific diabody | | Descriptor: | homo-specific diabody protein | | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | | Deposit date: | 2016-08-12 | | Release date: | 2016-10-12 | | Last modified: | 2024-10-09 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
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5GRU
 | | Structure of mono-specific diabody | | Descriptor: | Maltose-binding periplasmic protein, diabody protein | | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Cho, G, Lee, H, Lee, J.O. | | Deposit date: | 2016-08-12 | | Release date: | 2016-10-12 | | Last modified: | 2024-10-23 | | Method: | X-RAY DIFFRACTION (1.955 Å) | | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
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6ICM
 | | Pseudomonas putida CBB5 NdmA with ferredoxin domain of NdmD | | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | | Deposit date: | 2018-09-06 | | Release date: | 2019-09-04 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (2.961 Å) | | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
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6ICK
 | | Pseudomonas putida CBB5 NdmA | | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA | | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | | Deposit date: | 2018-09-06 | | Release date: | 2019-09-04 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (1.952 Å) | | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
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6ICP
 | | Pseudomonas putida CBB5 NdmA QL mutant with caffeine | | Descriptor: | CAFFEINE, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ... | | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | | Deposit date: | 2018-09-06 | | Release date: | 2019-09-04 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
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