8TJU
 
 | | Tetrahymena Ribozyme scaffolded TABV xrRNA | | Descriptor: | DNA/RNA (416-MER), MAGNESIUM ION | | Authors: | Langeberg, C.J, Kieft, J.S. | | Deposit date: | 2023-07-24 | | Release date: | 2023-11-01 | | Last modified: | 2023-11-22 | | Method: | ELECTRON MICROSCOPY (3.46 Å) | | Cite: | A generalizable scaffold-based approach for structure determination of RNAs by cryo-EM.
Nucleic Acids Res., 51, 2023
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8TJV
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8TJX
 | | Tetrahymena Ribozyme cryo-EM scaffold | | Descriptor: | MAGNESIUM ION, RNA (440-MER) | | Authors: | Langeberg, C.J, Kieft, J.S. | | Deposit date: | 2023-07-24 | | Release date: | 2023-11-01 | | Last modified: | 2023-11-22 | | Method: | ELECTRON MICROSCOPY (2.44 Å) | | Cite: | A generalizable scaffold-based approach for structure determination of RNAs by cryo-EM.
Nucleic Acids Res., 51, 2023
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6MJ0
 | | Crystal structure of the complete turnip yellow mosaic virus 3'UTR | | Descriptor: | RNA (101-MER) | | Authors: | Hartwick, E.W, Costantino, D.A, MacFadden, A, Nix, J.C, Tian, S, Das, R, Kieft, J.S. | | Deposit date: | 2018-09-20 | | Release date: | 2019-01-09 | | Last modified: | 2023-10-11 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Ribosome-induced RNA conformational changes in a viral 3'-UTR sense and regulate translation levels.
Nat Commun, 9, 2018
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7KGA
 | | Crystal structure of a mosquito-borne flavivirus dumbbell RNA | | Descriptor: | IRIDIUM HEXAMMINE ION, RNA (90-MER) | | Authors: | Akiyama, B.M, Graham, M.E, O'Donoghue, Z, Beckham, J.D, Kieft, J.S. | | Deposit date: | 2020-10-16 | | Release date: | 2021-06-23 | | Last modified: | 2024-03-06 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Three-dimensional structure of a flavivirus dumbbell RNA reveals molecular details of an RNA regulator of replication.
Nucleic Acids Res., 49, 2021
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7K16
 | | Tamana Bat Virus xrRNA1 | | Descriptor: | MAGNESIUM ION, RNA (51-MER), SODIUM ION | | Authors: | Jones, R.A, Kieft, J.S. | | Deposit date: | 2020-09-07 | | Release date: | 2020-10-14 | | Last modified: | 2023-10-18 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Different tertiary interactions create the same important 3D features in a distinct flavivirus xrRNA.
Rna, 27, 2021
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5TPY
 | | Crystal structure of an exonuclease resistant RNA from Zika virus | | Descriptor: | HEXANE-1,6-DIOL, MAGNESIUM ION, RNA (71-MER) | | Authors: | Akiyama, B.M, Laurence, H.M, Massey, A.R, Costantino, D.A, Xie, X, Yang, Y, Shi, P.-Y, Nix, J.C, Beckham, J.D, Kieft, J.S. | | Deposit date: | 2016-10-21 | | Release date: | 2016-12-14 | | Last modified: | 2023-10-04 | | Method: | X-RAY DIFFRACTION (2.805 Å) | | Cite: | Zika virus produces noncoding RNAs using a multi-pseudoknot structure that confounds a cellular exonuclease.
Science, 354, 2016
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2PXD
 | | Variant 1 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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2PXP
 | | Variant 13 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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2PXL
 | | Variant 9 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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2PXB
 | | Variant 2 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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2PXQ
 | | Variant 14 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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2PXK
 | | Variant 8 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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2PXV
 | | Variant 6 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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2PXE
 | | Variant 4 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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2PXT
 | | Variant 15 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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2PXF
 | | Variant 5 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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2PXU
 | | Variant 16 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
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