Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51 results

8JEA
DownloadVisualize
BU of 8jea by Molmil
Crystal structure of CGL1 from Crassostrea gigas, mannotriose-bound form (CGL1/Man(alpha)1-2Man(alpha)1-2Man)
Descriptor: ACETIC ACID, CACODYLATE ION, MAGNESIUM ION, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2023-05-15
Release date:2023-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Mannose oligosaccharide recognition of CGL1, a mannose-specific lectin containing DM9 motifs from Crassostrea gigas, revealed by X-ray crystallographic analysis.
J.Biochem., 175, 2023
8JEB
DownloadVisualize
BU of 8jeb by Molmil
Crystal structure of CGL1 from Crassostrea gigas, mannotetraose-bound form (CGL1/Man(alpha)1-2Man(alpha)1-2Man(alpha)1-6Man)
Descriptor: ACETIC ACID, MAGNESIUM ION, Natterin-3, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2023-05-15
Release date:2023-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Mannose oligosaccharide recognition of CGL1, a mannose-specific lectin containing DM9 motifs from Crassostrea gigas, revealed by X-ray crystallographic analysis.
J.Biochem., 175, 2023
8JE9
DownloadVisualize
BU of 8je9 by Molmil
Crystal structure of CGL1 from Crassostrea gigas, mannobiose-bound form (CGL1/Man(alpha)1-2Man)
Descriptor: ACETIC ACID, CACODYLATE ION, Natterin-3, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2023-05-15
Release date:2023-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1 Å)
Cite:Mannose oligosaccharide recognition of CGL1, a mannose-specific lectin containing DM9 motifs from Crassostrea gigas, revealed by X-ray crystallographic analysis.
J.Biochem., 175, 2023
6TLB
DownloadVisualize
BU of 6tlb by Molmil
Plasmodium falciparum lipocalin (PF3D7_0925900)
Descriptor: GLYCEROL, SODIUM ION, Serine/threonine protein kinase
Authors:Burda, P.C, Crosskey, T.D, Lauk, K, Wilmanns, M, Gilberger, T.W.
Deposit date:2019-12-02
Release date:2020-06-24
Last modified:2024-01-24
Method:SOLUTION SCATTERING (2.85 Å), X-RAY DIFFRACTION
Cite:Structure-Based Identification and Functional Characterization of a Lipocalin in the Malaria Parasite Plasmodium falciparum.
Cell Rep, 31, 2020
5ZD0
DownloadVisualize
BU of 5zd0 by Molmil
Solution structure of human ubiquitin with three alanine mutations in living eukaryotic cells by in-cell NMR spectroscopy
Descriptor: ubiquitin
Authors:Tanaka, T, Ikeya, T, Kamoshida, H, Mishima, M, Shirakawa, M, Guentert, P, Ito, Y.
Deposit date:2018-02-22
Release date:2019-08-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells.
Angew.Chem.Int.Ed.Engl., 58, 2019
4WQQ
DownloadVisualize
BU of 4wqq by Molmil
Structure of EPNH mutant of CEL-I
Descriptor: CALCIUM ION, Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2014-10-22
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mannose-recognition mutant of the galactose/N-acetylgalactosamine-specific C-type lectin CEL-I engineered by site-directed mutagenesis.
Biochim.Biophys.Acta, 1850, 2015
2JZ4
DownloadVisualize
BU of 2jz4 by Molmil
Putative 32 kDa myrosinase binding protein At3g16450.1 from Arabidopsis thaliana
Descriptor: Jasmonate inducible protein isolog
Authors:Takeda, N, Sugimori, N, Torizawa, T, Terauchi, T, Ono, A.M, Yagi, H, Yamaguchi, Y, Kato, K, Ikeya, T, Guntert, P, Aceti, D.J, Markley, J.L, Kainosho, M, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-12-28
Release date:2008-02-19
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structure of the putative 32 kDa myrosinase-binding protein from Arabidopsis (At3g16450.1) determined by SAIL-NMR.
Febs J., 275, 2008
5H4S
DownloadVisualize
BU of 5h4s by Molmil
Crystal structure of a rhamnose-binding lectin SUL-I from the toxopneustid sea urchin Toxopneustes pileolus
Descriptor: L-rhamnose-binding lectin, PHOSPHATE ION, alpha-L-rhamnopyranose
Authors:Unno, H, Hatakeyama, T.
Deposit date:2016-11-02
Release date:2017-05-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Carbohydrate recognition by the rhamnose-binding lectin SUL-I with a novel three-domain structure isolated from the venom of globiferous pedicellariae of the flower sea urchin Toxopneustes pileolus
Protein Sci., 26, 2017
1VCL
DownloadVisualize
BU of 1vcl by Molmil
Crystal Structure of Hemolytic Lectin CEL-III
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Uchida, T, Yamasaki, T, Eto, S, Sugawara, H, Kurisu, G, Nakagawa, A, Kusunoki, M, Hatakeyama, T.
Deposit date:2004-03-09
Release date:2004-09-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Hemolytic Lectin CEL-III Isolated from the Marine Invertebrate Cucumaria echinata: IMPLICATIONS OF DOMAIN STRUCTURE FOR ITS MEMBRANE PORE-FORMATION MECHANISM
J.Biol.Chem., 279, 2004
1WMZ
DownloadVisualize
BU of 1wmz by Molmil
Crystal Structure of C-type Lectin CEL-I complexed with N-acetyl-D-galactosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T.
Deposit date:2004-07-22
Release date:2004-09-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis
J.Biol.Chem., 279, 2004
1WMY
DownloadVisualize
BU of 1wmy by Molmil
Crystal Structure of C-type Lectin CEL-I from Cucumaria echinata
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, lectin CEL-I, ...
Authors:Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T.
Deposit date:2004-07-22
Release date:2004-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis
J.Biol.Chem., 279, 2004
2ROG
DownloadVisualize
BU of 2rog by Molmil
Solution structure of Thermus thermophilus HB8 TTHA1718 protein in living E. coli cells
Descriptor: Heavy metal binding protein
Authors:Sakakibara, D, Sasaki, A, Ikeya, T, Hamatsu, J, Koyama, H, Mishima, M, Mikawa, T, Waelchli, M, Smith, B.O, Shirakawa, M, Guentert, P, Ito, Y.
Deposit date:2008-03-21
Release date:2009-03-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Protein structure determination in living cells by in-cell NMR spectroscopy
Nature, 458, 2009
2ROE
DownloadVisualize
BU of 2roe by Molmil
Solution structure of thermus thermophilus HB8 TTHA1718 protein in vitro
Descriptor: Heavy metal binding protein
Authors:Sakakibara, D, Sasaki, A, Ikeya, T, Hamatsu, J, Koyama, H, Mishima, M, Mikawa, T, Waelchli, M, Smith, B.O, Shirakawa, M, Guentert, P, Ito, Y.
Deposit date:2008-03-20
Release date:2009-03-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Protein structure determination in living cells by in-cell NMR spectroscopy
Nature, 458, 2009
2JW8
DownloadVisualize
BU of 2jw8 by Molmil
Solution structure of stereo-array isotope labelled (SAIL) C-terminal dimerization domain of SARS coronavirus nucleocapsid protein
Descriptor: Nucleocapsid protein
Authors:Takeda, M, Chang, C, Ikeya, T, Guntert, P, Chang, Y, Hsu, Y, Huang, T, Kainosho, M.
Deposit date:2007-10-06
Release date:2008-08-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the c-terminal dimerization domain of SARS coronavirus nucleocapsid protein solved by the SAIL-NMR method
J.Mol.Biol., 380, 2008
6M5M
DownloadVisualize
BU of 6m5m by Molmil
SPL-1 - GlcNAc complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, N-acetylglucosamine-specific lectin
Authors:Unno, H, Hatakeyama, T.
Deposit date:2020-03-11
Release date:2020-06-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Novel carbohydrate-recognition mode of the invertebrate C-type lectin SPL-1 from Saxidomus purpuratus revealed by the GlcNAc-complex crystal in the presence of Ca2.
Acta Crystallogr.,Sect.F, 76, 2020
2KBY
DownloadVisualize
BU of 2kby by Molmil
The Tetramerization Domain of Human p73
Descriptor: Tumor protein p73
Authors:Coutandin, D, Ikeya, T, Loehr, F, Guntert, P, Ou, H.D, Doetsch, V.
Deposit date:2008-12-12
Release date:2009-09-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Conformational stability and activity of p73 require a second helix in the tetramerization domain.
Cell Death Differ., 16, 2009
6A56
DownloadVisualize
BU of 6a56 by Molmil
AJLec from the Sea Anemone Anthopleura japonica
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AJLec, CALCIUM ION, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2018-06-22
Release date:2018-07-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Identification, Characterization, and X-ray Crystallographic Analysis of a Novel Type of Lectin AJLec from the Sea Anemone Anthopleura japonica.
Sci Rep, 8, 2018
6A7T
DownloadVisualize
BU of 6a7t by Molmil
Ca2+-independent C-type lectin SPL-1 from Saxidomus purpuratus
Descriptor: CALCIUM ION, N-acetylglucosamine-specific lectin
Authors:Unno, H, Hatakeyama, T.
Deposit date:2018-07-04
Release date:2019-03-20
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Novel Ca2+-independent carbohydrate recognition of the C-type lectins, SPL-1 and SPL-2, from the bivalve Saxidomus purpuratus.
Protein Sci., 28, 2019
1WN0
DownloadVisualize
BU of 1wn0 by Molmil
Crystal Structure of Histidine-containing Phosphotransfer Protein, ZmHP2, from maize
Descriptor: histidine-containing phosphotransfer protein
Authors:Sugawara, H, Kawano, Y, Hatakeyama, T, Yamaya, T, Kamiya, N, Sakakibara, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-07-24
Release date:2005-01-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the histidine-containing phosphotransfer protein ZmHP2 from maize
Protein Sci., 14, 2005
6A7S
DownloadVisualize
BU of 6a7s by Molmil
Ca2+-independent C-type lectin SPL-2 from Saxidomus purpuratus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2018-07-04
Release date:2019-03-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel Ca2+-independent carbohydrate recognition of the C-type lectins, SPL-1 and SPL-2, from the bivalve Saxidomus purpuratus.
Protein Sci., 28, 2019
2M99
DownloadVisualize
BU of 2m99 by Molmil
Solution structure of a chymotrypsin inhibitor from the Taiwan cobra
Descriptor: Protease inhibitor NACI
Authors:Lin, Y.-J, Ikeya, T, Guntert, P, Chang, L.-S.
Deposit date:2013-06-05
Release date:2013-10-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR solution structure of a Chymotrypsin inhibitor from the Taiwan cobra Naja naja atra.
Molecules, 18, 2013
3N36
DownloadVisualize
BU of 3n36 by Molmil
Erythrina corallodendron lectin mutant (Y106G) in complex with Galactose
Descriptor: CALCIUM ION, Lectin, MANGANESE (II) ION, ...
Authors:Thamotharan, S, Karthikeyan, T, Kulkarni, K.A, Shetty, K.N, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2010-05-19
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Modification of the sugar specificity of a plant lectin: structural studies on a point mutant of Erythrina corallodendron lectin.
Acta Crystallogr.,Sect.D, 67, 2011
3N3H
DownloadVisualize
BU of 3n3h by Molmil
Erythrina corallodendron lectin mutant (Y106G) in complex with citrate
Descriptor: CALCIUM ION, CITRIC ACID, Lectin, ...
Authors:Thamotharan, S, Karthikeyan, T, Kulkarni, K.A, Shetty, K.N, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2010-05-20
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Modification of the sugar specificity of a plant lectin: structural studies on a point mutant of Erythrina corallodendron lectin.
Acta Crystallogr.,Sect.D, 67, 2011
3N35
DownloadVisualize
BU of 3n35 by Molmil
Erythrina corallodendron lectin mutant (Y106G) with N-Acetylgalactosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, Lectin, ...
Authors:Thamotharan, S, Karthikeyan, T, Kulkarni, K.A, Shetty, K.N, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2010-05-19
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Modification of the sugar specificity of a plant lectin: structural studies on a point mutant of Erythrina corallodendron lectin.
Acta Crystallogr.,Sect.D, 67, 2011
3W9T
DownloadVisualize
BU of 3w9t by Molmil
pore-forming CEL-III
Descriptor: CALCIUM ION, Hemolytic lectin CEL-III, MAGNESIUM ION, ...
Authors:Unno, H, Goda, S, Hatakeyama, T.
Deposit date:2013-04-16
Release date:2014-03-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Hemolytic lectin CEL-III heptamer reveals its transmembrane pore-formation mechanism
J.Biol.Chem., 2014

222926

數據於2024-07-24公開中

PDB statisticsPDBj update infoContact PDBjnumon