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PDB: 214 results

1ZYN
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BU of 1zyn by Molmil
Oxidized structure of the N-terminal domain of Salmonella typhimurium AhpF
Descriptor: Alkyl hydroperoxide reductase subunit F
Authors:Roberts, B.R, Wood, Z.A, Jonsson, T.J, Poole, L.B, Karplus, P.A.
Deposit date:2005-06-10
Release date:2005-06-21
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Oxidized and synchrotron cleaved structures of the disulfide redox center in the N-terminal domain of Salmonella typhimurium AhpF
Protein Sci., 14, 2005
1ZYP
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BU of 1zyp by Molmil
Synchrotron reduced form of the N-terminal domain of Salmonella typhimurium AhpF
Descriptor: Alkyl hydroperoxide reductase subunit F
Authors:Roberts, B.R, Wood, Z.A, Jonsson, T.J, Poole, L.B, Karplus, P.A.
Deposit date:2005-06-10
Release date:2005-06-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Oxidized and synchrotron cleaved structures of the disulfide redox center in the N-terminal domain of Salmonella typhimurium AhpF
Protein Sci., 14, 2005
1YEX
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BU of 1yex by Molmil
Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SULFATE ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-28
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
4P53
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BU of 4p53 by Molmil
ValA (2-epi-5-epi-valiolone synthase) from Streptomyces hygroscopicus subsp. jinggangensis 5008 with NAD+ and Zn2+ bound
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Cyclase, DI(HYDROXYETHYL)ETHER, ...
Authors:Kean, K.M, Codding, S.J, Karplus, P.A.
Deposit date:2014-03-13
Release date:2014-07-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of a sedoheptulose 7-phosphate cyclase: ValA from Streptomyces hygroscopicus.
Biochemistry, 53, 2014
4ND6
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BU of 4nd6 by Molmil
Crystal structure of apo 3-nitro-tyrosine tRNA synthetase (5B) in the open form
Descriptor: GLYCEROL, Tyrosine-tRNA ligase
Authors:Cooley, R.B, Driggers, C.M, Karplus, P.A, Mehl, R.A.
Deposit date:2013-10-25
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Improved Second-Generation 3-Nitro-tyrosine tRNA Synthetases.
Biochemistry, 53, 2014
4PBT
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BU of 4pbt by Molmil
Crystal structure of the M. jannaschii G2 tRNA synthetase variant bound to 4-trans-cyclooctene-amidopheylalanine (Tco-amF)
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 4-{[(1R,4E)-cyclooct-4-en-1-ylcarbonyl]amino}-L-phenylalanine, GLYCEROL, ...
Authors:Cooley, R.B, Karplus, P.A, Mehl, R.A.
Deposit date:2014-04-13
Release date:2014-07-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Gleaning Unexpected Fruits from Hard-Won Synthetases: Probing Principles of Permissivity in Non-canonical Amino Acid-tRNA Synthetases.
Chembiochem, 15, 2014
4ND7
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BU of 4nd7 by Molmil
Crystal structure of apo 3-nitro-tyrosine tRNA synthetase (5B) in the closed form
Descriptor: BETA-MERCAPTOETHANOL, SODIUM ION, Tyrosine--tRNA ligase
Authors:Cooley, R.B, Driggers, C.M, Karplus, P.A, Mehl, R.A.
Deposit date:2013-10-25
Release date:2014-03-19
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Improved Second-Generation 3-Nitro-tyrosine tRNA Synthetases.
Biochemistry, 53, 2014
4PTZ
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BU of 4ptz by Molmil
Crystal structure of the Escherichia coli alkanesulfonate FMN reductase SsuE in FMN-bound form
Descriptor: FLAVIN MONONUCLEOTIDE, FMN reductase SsuE, GLYCEROL, ...
Authors:Driggers, C.M, Ellis, H.R, Karplus, P.A.
Deposit date:2014-03-11
Release date:2014-06-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9007 Å)
Cite:Crystal Structure of Escherichia coli SsuE: Defining a General Catalytic Cycle for FMN Reductases of the Flavodoxin-like Superfamily.
Biochemistry, 53, 2014
4PBR
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BU of 4pbr by Molmil
Crystal structure of the M. jannaschii G2 tRNA synthetase variant bound to 4-(2-bromoisobutyramido)-phenylalanine (BibaF)
Descriptor: 4-[(2-bromo-2-methylpropanoyl)amino]-L-phenylalanine, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Cooley, R.B, Karplus, P.A, Mehl, R.A.
Deposit date:2014-04-13
Release date:2014-07-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Gleaning Unexpected Fruits from Hard-Won Synthetases: Probing Principles of Permissivity in Non-canonical Amino Acid-tRNA Synthetases.
Chembiochem, 15, 2014
4PJY
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BU of 4pjy by Molmil
Azide bound Cysteine Dioxygenase at pH 6.2
Descriptor: AZIDE ION, Cysteine dioxygenase type 1, FE (III) ION
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2014-05-12
Release date:2016-02-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
4PBS
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BU of 4pbs by Molmil
Crystal structure of the M. jannaschii F9 tRNA synthetase variant bound to 4-(2-bromoisobutyramido)-phenylalanine (BibaF)
Descriptor: 4-[(2-bromo-2-methylpropanoyl)amino]-L-phenylalanine, Tyrosine--tRNA ligase
Authors:Cooley, R.B, Karplus, P.A, Mehl, R.A.
Deposit date:2014-04-13
Release date:2014-07-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.011 Å)
Cite:Gleaning Unexpected Fruits from Hard-Won Synthetases: Probing Principles of Permissivity in Non-canonical Amino Acid-tRNA Synthetases.
Chembiochem, 15, 2014
4NDA
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BU of 4nda by Molmil
Crystal structure of 3-nitro-tyrosine tRNA synthetase (5B) bound to 3-nitro-tyrosine
Descriptor: GLYCEROL, META-NITRO-TYROSINE, SODIUM ION, ...
Authors:Cooley, R.B, Driggers, C.M, Karplus, P.A, Mehl, R.A.
Deposit date:2013-10-25
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis of Improved Second-Generation 3-Nitro-tyrosine tRNA Synthetases.
Biochemistry, 53, 2014
4QM8
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BU of 4qm8 by Molmil
Crystal Structure of a Putative Cysteine Dioxygnase From Bacillus subtilis: A Alternative Modeling of 3EQE
Descriptor: CYSTEINE, Cysteine dioxygenase, FE (III) ION
Authors:Hartman, S.H, Driggers, C.M, Karplus, P.A.
Deposit date:2014-06-15
Release date:2014-11-26
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structures of Arg- and Gln-type bacterial cysteine dioxygenase homologs.
Protein Sci., 24, 2015
4PU0
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BU of 4pu0 by Molmil
Crystal structure of the Escherichia coli alkanesulfonate FMN reductase SsuE in FMNH2-bound form
Descriptor: FLAVIN MONONUCLEOTIDE, FMN reductase SsuE, GLYCEROL, ...
Authors:Driggers, C.M, Ellis, H.R, Karplus, P.A.
Deposit date:2014-03-11
Release date:2014-06-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3018 Å)
Cite:Crystal Structure of Escherichia coli SsuE: Defining a General Catalytic Cycle for FMN Reductases of the Flavodoxin-like Superfamily.
Biochemistry, 53, 2014
4PIY
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BU of 4piy by Molmil
Homocysteine bound Cysteine Dioxygenase C93A variant at pH 6.2
Descriptor: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, Cysteine dioxygenase type 1, FE (III) ION
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2014-05-09
Release date:2016-02-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
4PIX
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BU of 4pix by Molmil
Unliganded Cysteine Dioxygenase C93A variant at pH 6.2
Descriptor: CHLORIDE ION, Cysteine dioxygenase type 1, FE (III) ION
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2014-05-09
Release date:2016-02-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
4PIZ
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BU of 4piz by Molmil
Homocysteine-bound Cysteine Dioxygenase at pH 6.2
Descriptor: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, Cysteine dioxygenase type 1, FE (III) ION
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2014-05-09
Release date:2016-02-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
4PTY
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BU of 4pty by Molmil
Crystal structure of the Escherichia coli alkanesulfonate FMN reductase SsuE in apo form
Descriptor: FMN reductase SsuE, GLYCEROL, PHOSPHATE ION
Authors:Driggers, C.M, Ellis, H.R, Karplus, P.A.
Deposit date:2014-03-11
Release date:2014-06-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Escherichia coli SsuE: Defining a General Catalytic Cycle for FMN Reductases of the Flavodoxin-like Superfamily.
Biochemistry, 53, 2014
4QMA
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BU of 4qma by Molmil
Crystal Structure of a Putative Cysteine Dioxygnase From Ralstonia eutropha: An Alternative Modeling of 2GM6 from JCSG Target 361076
Descriptor: 1,2-ETHANEDIOL, Cysteine dioxygenase type I, FE (III) ION, ...
Authors:Hartman, S.H, Driggers, C.M, Karplus, P.A, Joint Center for Structural Genomics (JCSG)
Deposit date:2014-06-15
Release date:2014-11-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structures of Arg- and Gln-type bacterial cysteine dioxygenase homologs.
Protein Sci., 24, 2015
4X9M
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BU of 4x9m by Molmil
Oxidized L-alpha-Glycerophosphate Oxidase from Mycoplasma pneumoniae with FAD bound
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, L-alpha-glycerophosphate oxidase, NICKEL (II) ION, ...
Authors:Elkhal, C.K, Kean, K.M, Parsonage, D, Claiborne, A, Karplus, P.A.
Deposit date:2014-12-11
Release date:2015-03-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and proposed mechanism of l-alpha-glycerophosphate oxidase from Mycoplasma pneumoniae.
Febs J., 282, 2015
4XEZ
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BU of 4xez by Molmil
cysteine dioxygenase variant - Y157F at pH 8.0 with dithionite
Descriptor: CHLORIDE ION, Cysteine dioxygenase type 1, FE (III) ION, ...
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2014-12-25
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.2469 Å)
Cite:Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
4XET
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BU of 4xet by Molmil
Fe-Cl bound Y157F CDO at pH ~7.0 in the presence of azide
Descriptor: CHLORIDE ION, Cysteine dioxygenase type 1, FE (III) ION
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2014-12-24
Release date:2016-04-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
4XF0
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BU of 4xf0 by Molmil
cysteine dioxygenase variant - C93A at pH 8.0 with cysteine
Descriptor: CHLORIDE ION, CYSTEINE, Cysteine dioxygenase type 1, ...
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2014-12-25
Release date:2016-03-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.3994 Å)
Cite:Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
4XF3
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BU of 4xf3 by Molmil
cysteine dioxygenase variant - Y157F at pH 8.0 with cysteine and dithionite
Descriptor: CYSTEINE, Cysteine dioxygenase type 1, FE (III) ION
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2014-12-25
Release date:2016-04-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
4XFG
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BU of 4xfg by Molmil
cysteine dioxygenase variant - C93A at pH 6.2 with cysteine
Descriptor: CHLORIDE ION, CYSTEINE, Cysteine dioxygenase type 1, ...
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2014-12-26
Release date:2016-02-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016

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