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PDB: 157 results

7KBR
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BU of 7kbr by Molmil
Co-crystal structure of alpha glucosidase with compound 10
Descriptor: 1,2-ETHANEDIOL, 2-{[2-nitro-4-(triazan-1-yl)phenyl]amino}ethyl (2-{[(1S,2S,3R,4S,5S)-2,3,4,5-tetrahydroxy-5-(hydroxymethyl)cyclohexyl]amino}ethyl)carbamate, CALCIUM ION, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2020-10-02
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:N-Substituted Valiolamine Derivatives as Potent Inhibitors of Endoplasmic Reticulum alpha-Glucosidases I and II with Antiviral Activity.
J.Med.Chem., 64, 2021
7JTY
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BU of 7jty by Molmil
Co-crystal structure of alpha glucosidase with compound 1
Descriptor: (1S,2S,3R,4S,5S)-5-(butylamino)-1-(hydroxymethyl)cyclohexane-1,2,3,4-tetrol, 1,2-ETHANEDIOL, Alpha glucosidase 2 alpha neutral subunit, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2020-08-18
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:N-Substituted Valiolamine Derivatives as Potent Inhibitors of Endoplasmic Reticulum alpha-Glucosidases I and II with Antiviral Activity.
J.Med.Chem., 64, 2021
6ADZ
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LdCoroCC Double mutant- I486A-L493A
Descriptor: Coronin-like protein, SULFATE ION
Authors:Karade, S.S, Ansari, A, Pratap, J.V.
Deposit date:2018-08-02
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.431 Å)
Cite:Molecular and structural analysis of a mechanical transition of helices in the L. donovani coronin coiled-coil domain.
Int.J.Biol.Macromol., 143, 2020
6ADO
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BU of 6ado by Molmil
LdCoroCC mutant-I486A
Descriptor: Coronin-like protein
Authors:Karade, S.S, Ansari, A, Pratap, J.V.
Deposit date:2018-08-01
Release date:2019-10-09
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Molecular and structural analysis of a mechanical transition of helices in the L. donovani coronin coiled-coil domain.
Int.J.Biol.Macromol., 143, 2020
7FCR
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BU of 7fcr by Molmil
Crystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
Descriptor: Apolipoprotein E, SODIUM ION
Authors:Cherakara, S, Kumar, A, Garai, K, Ghosh, B.
Deposit date:2021-07-15
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
To be published
7FCS
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BU of 7fcs by Molmil
Crystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
Descriptor: Apolipoprotein E, SODIUM ION
Authors:Cherakara, S, Kumar, A, Garai, K, Ghosh, B.
Deposit date:2021-07-15
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
To be published
3NCH
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BU of 3nch by Molmil
Yeast Glycogen Synthase (Gsy2p) Basal State Conformation
Descriptor: Glycogen [starch] synthase isoform 2, SULFATE ION
Authors:Baskaran, S, Hurley, T.D.
Deposit date:2010-06-04
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Structural basis for glucose-6-phosphate activation of glycogen synthase.
Proc.Natl.Acad.Sci.USA, 107, 2010
3NB0
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BU of 3nb0 by Molmil
Glucose-6-Phosphate activated form of Yeast Glycogen Synthase
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, DI(HYDROXYETHYL)ETHER, Glycogen [starch] synthase isoform 2
Authors:Baskaran, S, Hurley, T.D.
Deposit date:2010-06-02
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:Structural basis for glucose-6-phosphate activation of glycogen synthase.
Proc.Natl.Acad.Sci.USA, 107, 2010
3NAZ
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BU of 3naz by Molmil
Basal state form of Yeast Glycogen Synthase
Descriptor: Glycogen [starch] synthase isoform 2, PEPTIDE, SULFATE ION
Authors:Baskaran, S, Hurley, T.D.
Deposit date:2010-06-02
Release date:2010-10-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for glucose-6-phosphate activation of glycogen synthase.
Proc.Natl.Acad.Sci.USA, 107, 2010
3O3C
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BU of 3o3c by Molmil
Glycogen synthase basal state UDP complex
Descriptor: Glycogen [starch] synthase isoform 2, SULFATE ION, URIDINE-5'-DIPHOSPHATE
Authors:Baskaran, S, Hurley, T.D.
Deposit date:2010-07-23
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.512 Å)
Cite:Structural basis for glucose-6-phosphate activation of glycogen synthase.
Proc.Natl.Acad.Sci.USA, 107, 2010
3RSZ
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BU of 3rsz by Molmil
Maltodextran bound basal state conformation of yeast glycogen synthase isoform 2
Descriptor: Glycogen [starch] synthase isoform 2, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Baskaran, S, Hurley, T.D.
Deposit date:2011-05-02
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.009 Å)
Cite:Multiple Glycogen-binding Sites in Eukaryotic Glycogen Synthase Are Required for High Catalytic Efficiency toward Glycogen.
J.Biol.Chem., 286, 2011
4EXV
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BU of 4exv by Molmil
Structure of Kluyveromyces lactis Hsv2p
Descriptor: SULFATE ION, SVP1-like protein 2
Authors:Baskaran, S, Hurley, J.H.
Deposit date:2012-05-01
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Two-Site Recognition of Phosphatidylinositol 3-Phosphate by PROPPINs in Autophagy.
Mol.Cell, 47, 2012
3RT1
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BU of 3rt1 by Molmil
Maltodextarn bound activated state form of yeast glycogen synthase isoform 2
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, DI(HYDROXYETHYL)ETHER, PROTEIN (Glycogen [starch] synthase isoform 2), ...
Authors:Baskaran, S, Hurley, T.D.
Deposit date:2011-05-02
Release date:2011-08-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Multiple Glycogen-binding Sites in Eukaryotic Glycogen Synthase Are Required for High Catalytic Efficiency toward Glycogen.
J.Biol.Chem., 286, 2011
4CXM
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BU of 4cxm by Molmil
Crystal Structure of Plasmodium Falciparum Spermidine Synthase in Complex with METHYLTHIOADENOSIN AND SPERMIDINE after catalysis in crystal
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, SPERMIDINE, SPERMIDINE SYNTHASE
Authors:Sprenger, J, Svensson, B, Al-Karadaghi, S, Persson, L.
Deposit date:2014-04-07
Release date:2014-10-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Three-Dimensional Structures of Plasmodium Falciparum Spermidine Synthase with Bound Inhibitors Suggest New Strategies for Drug Design.
Acta Crystallogr.,Sect.D, 71, 2015
4CWA
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BU of 4cwa by Molmil
Structure of Plasmodium Falciparum Spermidine Synthase in Complex with 1H-Benzimidazole-2-pentanamine
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 5-(1H-benzimidazol-2-yl)pentan-1-amine, SPERMIDINE SYNTHASE
Authors:Sprenger, J, Halander, J.C, Svensson, B, Al-Karadaghi, S, Persson, L.
Deposit date:2014-04-01
Release date:2014-10-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Three-Dimensional Structures of Plasmodium Falciparum Spermidine Synthase with Bound Inhibitors Suggest New Strategies for Drug Design.
Acta Crystallogr.,Sect.D, 71, 2015
2AC2
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BU of 2ac2 by Molmil
Crystal structure of the Tyr13Phe mutant variant of Bacillus subtilis Ferrochelatase with Zn(2+) bound at the active site
Descriptor: Ferrochelatase, ZINC ION
Authors:Shipovskov, S, Karlberg, T, Fodje, M, Hansson, M.D, Ferreira, G.C, Hansson, M, Reimann, C.T, Al-Karadaghi, S.
Deposit date:2005-07-18
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Metallation of the Transition-state Inhibitor N-methyl Mesoporphyrin by Ferrochelatase: Implications for the Catalytic Reaction Mechanism.
J.Mol.Biol., 352, 2005
2AC4
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BU of 2ac4 by Molmil
Crystal structure of the His183Cys mutant variant of Bacillus subtilis Ferrochelatase
Descriptor: Ferrochelatase
Authors:Shipovskov, S, Karlberg, T, Fodje, M, Hansson, M.D, Ferreira, G.C, Hansson, M, Reimann, C.T, Al-Karadaghi, S.
Deposit date:2005-07-18
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Metallation of the Transition-state Inhibitor N-methyl Mesoporphyrin by Ferrochelatase: Implications for the Catalytic Reaction Mechanism.
J.Mol.Biol., 352, 2005
7R4W
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BU of 7r4w by Molmil
Single stranded DNA binding protein SSB M5 from Fervidobacterium gondwanense
Descriptor: ACETIC ACID, PHOSPHATE ION, Single-stranded DNA-binding protein
Authors:Hakansson, M, Svensson, L.A, Werbowy, O, Al-Karadaghi, S, Kaczorowski, T, Kaczorowska, A.K, Dorawa, S.
Deposit date:2022-02-09
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular characterization of a single stranded DNA binding protein from Fervidobacterium gondwanense
To Be Published
6I5O
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BU of 6i5o by Molmil
Crystal structure of SPBc2 prophage-derived protein YomS
Descriptor: SPBc2 prophage-derived uncharacterized protein YomS
Authors:Hakansson, M, Svensson, L.A, Welin, M, Al-Karadaghi, S.
Deposit date:2018-11-14
Release date:2019-11-20
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Crystal structures of the Bacillus subtilis prophage lytic cassette proteins XepA and YomS.
Acta Crystallogr D Struct Biol, 75, 2019
6I56
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BU of 6i56 by Molmil
Crystal structure of PBSX exported protein XepA
Descriptor: GLYCEROL, Phage-like element PBSX protein XepA
Authors:Hakansson, M, Svensson, L.A, Welin, M, Al-Karadaghi, S.
Deposit date:2018-11-13
Release date:2019-11-20
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structures of the Bacillus subtilis prophage lytic cassette proteins XepA and YomS.
Acta Crystallogr D Struct Biol, 75, 2019
2B2C
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BU of 2b2c by Molmil
Cloning, expression, characterisation and three- dimensional structure determination of the Caenorhabditis elegans spermidine synthase
Descriptor: spermidine synthase
Authors:Dufe, V.T, Luersen, K, Eschbach, M.L, Haider, N, Karlberg, T, Walter, R.D, Al-Karadaghi, S.
Deposit date:2005-09-19
Release date:2005-11-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cloning, expression, characterisation and three-dimensional structure determination of Caenorhabditis elegans spermidine synthase
FEBS LETT., 579, 2005
3M4Z
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BU of 3m4z by Molmil
Crystal Structure of B. subtilis ferrochelatase with Cobalt bound at the active site
Descriptor: CHLORIDE ION, COBALT (II) ION, Ferrochelatase, ...
Authors:Soderberg, C.A.G, Hansson, M.D, Sreekanth, R, Al-Karadaghi, S, Hansson, M.
Deposit date:2010-03-12
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Bacterial ferrochelatase goes human: Tyr13 determines the apparent metal specificity of Bacillus subtilis ferrochelatase
To be Published
1AN7
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BU of 1an7 by Molmil
RIBOSOMAL PROTEIN S8 FROM THERMUS THERMOPHILUS
Descriptor: RIBOSOMAL PROTEIN S8
Authors:Nevskaya, N, Nikonov, S, Al-Karadaghi, S.
Deposit date:1997-06-27
Release date:1998-07-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of ribosomal protein S8 from Thermus thermophilus reveals a high degree of structural conservation of a specific RNA binding site.
J.Mol.Biol., 279, 1998
1AD2
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BU of 1ad2 by Molmil
RIBOSOMAL PROTEIN L1 MUTANT WITH SERINE 179 REPLACED BY CYSTEINE
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, MERCURY (II) ION, RIBOSOMAL PROTEIN L1, ...
Authors:Unge, J, Al-Karadaghi, S, Liljas, A, Jonsson, B.-H, Eliseikina, I, Ossina, N, Nevskaya, N, Fomenkova, N, Garber, M, Nikonov, S.
Deposit date:1997-02-20
Release date:1997-05-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A mutant form of the ribosomal protein L1 reveals conformational flexibility.
FEBS Lett., 411, 1997
5T0V
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BU of 5t0v by Molmil
Architecture of the Yeast Mitochondrial Iron-Sulfur Cluster Assembly Machinery: the Sub-Complex Formed by the Iron Donor, Yfh1, and the Scaffold, Isu1
Descriptor: Frataxin homolog, mitochondrial, Iron sulfur cluster assembly protein 1
Authors:Ranatunga, W, Gakh, O, Galeano, B.K, Smith IV, D.Y, Soderberg, C.A, Al-Karadaghi, S, Thompson, J.R, Isaya, G.
Deposit date:2016-08-16
Release date:2016-08-31
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (17.5 Å)
Cite:Architecture of the Yeast Mitochondrial Iron-Sulfur Cluster Assembly Machinery: the Sub-Complex Formed by the Iron Donor, Yfh1, and the Scaffold, Isu1
J. Biol. Chem., 291, 2016

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