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PDB: 75 件

3A79
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Crystal structure of TLR2-TLR6-Pam2CSK4 complex
分子名称: (2S)-propane-1,2-diyl dihexadecanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kang, J.Y, Jin, M.S, Lee, J.-O.
登録日2009-09-20
公開日2009-11-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Recognition of lipopeptide patterns by Toll-like receptor 2-Toll-like receptor 6 heterodimer
Immunity, 31, 2009
3A7C
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Crystal structure of TLR2-PE-DTPA complex
分子名称: (10S,13R)-3-{2-[{2-[bis(carboxymethyl)amino]ethyl}(carboxymethyl)amino]ethyl}-10-hydroxy-5,16-dioxo-13-(tetradecanoyloxy)-9,11,15-trioxa-3,6-diaza-10-phosphanonacosan-1-oic acid 10-oxide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kang, J.Y, Jin, M.S, Lee, J.-O.
登録日2009-09-20
公開日2009-11-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Recognition of lipopeptide patterns by Toll-like receptor 2-Toll-like receptor 6 heterodimer
Immunity, 31, 2009
3A7B
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Crystal structure of TLR2-Streptococcus Pneumoniae lipoteichoic acid complex
分子名称: (2S)-1-({3-O-[2-(acetylamino)-4-amino-2,4,6-trideoxy-beta-D-galactopyranosyl]-alpha-D-glucopyranosyl}oxy)-3-(heptanoyloxy)propan-2-yl (7Z)-pentadec-7-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kang, J.Y, Jin, M.S, Lee, J.-O.
登録日2009-09-20
公開日2009-11-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Recognition of lipopeptide patterns by Toll-like receptor 2-Toll-like receptor 6 heterodimer
Immunity, 31, 2009
8EG8
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Cryo-EM structure of consensus elemental paused elongation complex with a folded TL
分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A.
登録日2022-09-12
公開日2023-03-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EGB
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BU of 8egb by Molmil
Cryo-EM structure of consensus elemental paused elongation complex with an unfolded TL
分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A.
登録日2022-09-12
公開日2023-03-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EG7
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BU of 8eg7 by Molmil
Cryo-EM structure of pre-consensus elemental paused elongation complex
分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A.
登録日2022-09-11
公開日2023-03-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EHI
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BU of 8ehi by Molmil
Cryo-EM structure of his-elemental paused elongation complex with an unfolded TL (2)
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A.
登録日2022-09-14
公開日2023-03-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EHF
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Cryo-EM structure of his-elemental paused elongation complex with an unfolded TL (1)
分子名称: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A.
登録日2022-09-14
公開日2023-03-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EHA
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BU of 8eha by Molmil
Cryo-EM structure of his-elemental paused elongation complex with a folded TL and a rotated RH-FL (out)
分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A.
登録日2022-09-14
公開日2023-03-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EH8
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BU of 8eh8 by Molmil
Cryo-EM structure of his-elemental paused elongation complex with a folded TL and a rotated RH-FL (1)
分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A.
登録日2022-09-13
公開日2023-03-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EH9
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BU of 8eh9 by Molmil
Cryo-EM structure of his-elemental paused elongation complex with a folded TL and a rotated RH-FL (2)
分子名称: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A.
登録日2022-09-13
公開日2023-03-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options.
Proc.Natl.Acad.Sci.USA, 120, 2023
6ALG
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BU of 6alg by Molmil
CryoEM structure of HK022 Nun - E.coli RNA polymerase elongation complex
分子名称: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Darst, S.A.
登録日2017-08-07
公開日2017-08-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of transcription arrest by coliphage HK022 Nun in anEscherichia coliRNA polymerase elongation complex.
Elife, 6, 2017
6BJS
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BU of 6bjs by Molmil
CryoEM structure of E.coli his pause elongation complex without pause hairpin
分子名称: DNA (32-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Landick, R, Darst, S.A.
登録日2017-11-06
公開日2018-03-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献RNA Polymerase Accommodates a Pause RNA Hairpin by Global Conformational Rearrangements that Prolong Pausing.
Mol. Cell, 69, 2018
6C6S
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BU of 6c6s by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound with RfaH
分子名称: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Artsimovitch, I, Landick, R, Darst, S.A.
登録日2018-01-19
公開日2018-07-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators.
Cell, 173, 2018
6ASX
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BU of 6asx by Molmil
CryoEM structure of E.coli his pause elongation complex
分子名称: DNA (32-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Landick, R, Darst, S.A.
登録日2017-08-25
公開日2018-03-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献RNA Polymerase Accommodates a Pause RNA Hairpin by Global Conformational Rearrangements that Prolong Pausing.
Mol. Cell, 69, 2018
6C6U
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BU of 6c6u by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound with NusG
分子名称: DNA (29-MER), DNA-DIRECTED RNA POLYMERASE BETA', DNA-directed RNA polymerase subunit alpha, ...
著者Kang, J.Y, Artsimovitch, I, Landick, R, Darst, S.A.
登録日2018-01-19
公開日2018-07-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators.
Cell, 173, 2018
6ALF
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BU of 6alf by Molmil
CryoEM structure of crosslinked E.coli RNA polymerase elongation complex
分子名称: DNA (29-MER), DNA (5'-D(*GP*GP*GP*CP*TP*AP*AP*TP*GP*AP*CP*GP*GP*CP*GP*AP*AP*TP*AP*CP*CP*C)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Kang, J.Y, Darst, S.A.
登録日2017-08-07
公開日2017-08-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis of transcription arrest by coliphage HK022 Nun in anEscherichia coliRNA polymerase elongation complex.
Elife, 6, 2017
6C6T
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BU of 6c6t by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound with RfaH
分子名称: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Artsimovitch, I, Landick, R, Darst, S.A.
登録日2018-01-19
公開日2018-07-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators.
Cell, 173, 2018
6LIN
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BU of 6lin by Molmil
Crystal structure of human PDK2 complexed with GM10030
分子名称: 4-[[[4-[3,5-bis(fluoranyl)-4-(4-oxidanyl-4-oxidanylidene-butoxy)phenyl]-5-[5-chloranyl-2,4-bis(oxidanyl)phenyl]-1,2-oxazol-3-yl]carbonylamino]methyl]benzoic acid, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Kang, J, Kim, J.
登録日2019-12-12
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structural basis for the inhibition of PDK2 by novel ATP- and lipoyl-binding site targeting compounds.
Biochem.Biophys.Res.Commun., 527, 2020
6ALH
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BU of 6alh by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex
分子名称: DNA (29-MER), DNA (5'-D(*GP*GP*GP*CP*TP*AP*AP*TP*GP*AP*CP*GP*GP*CP*GP*AP*AP*TP*AP*CP*CP*C)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Kang, J.Y, Darst, S.A.
登録日2017-08-07
公開日2017-08-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural basis of transcription arrest by coliphage HK022 Nun in anEscherichia coliRNA polymerase elongation complex.
Elife, 6, 2017
6LIO
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BU of 6lio by Molmil
Crystal structure of human PDK2 complexed with GM67520
分子名称: 4-[[[5-[5-chloranyl-2,4-bis(oxidanyl)phenyl]-4-[4-(1-methylsulfonylpiperidin-4-yl)oxyphenyl]-1,2-oxazol-3-yl]carbonylamino]methyl]cyclohexane-1-carboxylic acid, GLYCEROL, SULFATE ION, ...
著者Kang, J, Kim, J.
登録日2019-12-12
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural basis for the inhibition of PDK2 by novel ATP- and lipoyl-binding site targeting compounds.
Biochem.Biophys.Res.Commun., 527, 2020
6LIL
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BU of 6lil by Molmil
Crystal structure of human PDK2 complexed with an allosteric inhibitor compound 8c
分子名称: 1-(1-piperidin-4-ylpyrazol-4-yl)anthracene-9,10-dione, CITRATE ANION, DI(HYDROXYETHYL)ETHER, ...
著者Kang, J, Kim, J.
登録日2019-12-12
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural basis for the inhibition of PDK2 by novel ATP- and lipoyl-binding site targeting compounds.
Biochem.Biophys.Res.Commun., 527, 2020
5BZ6
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BU of 5bz6 by Molmil
Crystal structure of the N-terminal domain single mutant (S92A) of the human mitochondrial calcium uniporter fused with T4 lysozyme
分子名称: Lysozyme,Calcium uniporter protein, mitochondrial, SULFATE ION
著者Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H.
登録日2015-06-11
公開日2015-09-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
5CJ9
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BU of 5cj9 by Molmil
Bacillus halodurans Arginine repressor, ArgR
分子名称: Arginine repressor, S-1,2-PROPANEDIOL
著者Park, Y.W, Kang, J, Yeo, H.Y, Lee, J.Y.
登録日2015-07-14
公開日2016-06-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.409 Å)
主引用文献Structural Analysis and Insights into the Oligomeric State of an Arginine-Dependent Transcriptional Regulator from Bacillus halodurans.
Plos One, 11, 2016
6J10
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BU of 6j10 by Molmil
Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly
分子名称: 6-cyclohexyl-4-methyl-1-oxidanyl-pyridin-2-one, Capsid protein
著者Park, S, Jin, M.S, Cho, Y, Kang, J, Kim, S, Park, M, Park, H, Kim, J, Park, S, Hwang, J, Kim, Y, Kim, Y.J.
登録日2018-12-27
公開日2019-04-17
最終更新日2019-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly.
Nat Commun, 10, 2019

 

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