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PDB: 74 results

4QIW
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BU of 4qiw by Molmil
Crystal structure of euryarchaeal RNA polymerase from Thermococcus kodakarensis
Descriptor: DNA-directed RNA polymerase, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ...
Authors:Jun, S.-H, Murakami, K.S.
Deposit date:2014-06-02
Release date:2014-10-08
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration.
Nat Commun, 5, 2014
2D0D
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BU of 2d0d by Molmil
Crystal Structure of a Meta-cleavage Product Hydrolase (CumD) A129V Mutant
Descriptor: 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, CHLORIDE ION, PHOSPHATE ION
Authors:Jun, S.Y, Fushinobu, S, Nojiri, H, Omori, T, Shoun, H, Wakagi, T.
Deposit date:2005-08-01
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Improving the catalytic efficiency of a meta-cleavage product hydrolase (CumD) from Pseudomonas fluorescens IP01
Biochim.Biophys.Acta, 1764, 2006
6PXS
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BU of 6pxs by Molmil
Crystal structure of iminodiacetate oxidase (IdaA) from Chelativorans sp. BNC1
Descriptor: FAD dependent oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Jun, S.Y, Lewis, K.M, Xun, L, Kang, C.
Deposit date:2019-07-26
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.836 Å)
Cite:Structural and biochemical characterization of iminodiacetate oxidase from Chelativorans sp. BNC1.
Mol.Microbiol., 112, 2019
6KF9
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BU of 6kf9 by Molmil
Cryo-EM structure of Thermococcus kodakarensis RNA polymerase
Descriptor: DNA (27-MER), DNA (5'-D(P*TP*CP*GP*GP*TP*AP*AP*TP*CP*AP*CP*GP*CP*TP*CP*C)-3'), DNA-directed RNA polymerase subunit, ...
Authors:Jun, S.-H, Hyun, J, Jeong, H, Cha, J.S, Kim, H, Bartlett, M.S, Cho, H.-S, Murakami, K.S.
Deposit date:2019-07-07
Release date:2020-07-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
6KF4
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BU of 6kf4 by Molmil
Cryo-EM structure of Thermococcus kodakarensis RNA polymerase
Descriptor: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ...
Authors:Jun, S.-H, Hyun, J, Jeong, H, Cha, J.S, Kim, H, Bartlett, M.S, Cho, H.-S, Murakami, K.S.
Deposit date:2019-07-06
Release date:2020-07-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
6KF3
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BU of 6kf3 by Molmil
Cryo-EM structure of Thermococcus kodakarensis RNA polymerase
Descriptor: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ...
Authors:Jun, S.-H, Hyun, J, Jeong, H, Cha, J.S, Kim, H, Bartlett, M.S, Cho, H.-S, Murakami, K.S.
Deposit date:2019-07-06
Release date:2020-07-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
6AT7
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BU of 6at7 by Molmil
Phenylalanine Ammonia-Lyase (PAL) from Sorghum bicolor
Descriptor: AMMONIUM ION, Phenylalanine ammonia-lyase
Authors:Jun, S.Y, Kang, C.
Deposit date:2017-08-28
Release date:2018-01-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Biochemical and Structural Analysis of Substrate Specificity of a Phenylalanine Ammonia-Lyase.
Plant Physiol., 176, 2018
5DQP
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BU of 5dqp by Molmil
EDTA monooxygenase (EmoA) from Chelativorans sp. BNC1
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, EDTA monooxygenase, SULFATE ION
Authors:Jun, S.Y, Youn, B, Xun, L, Kang, C, Lewis, K.M.
Deposit date:2015-09-15
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.146 Å)
Cite:Structural and biochemical characterization of EDTA monooxygenase and its physical interaction with a partner flavin reductase.
Mol.Microbiol., 100, 2016
1H8N
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BU of 1h8n by Molmil
Three-dimensional structure of anti-ampicillin single chain Fv fragment from phage-displayed murine antibody libraries
Descriptor: GLYCEROL, MUTANT AL2 6E7S9G, SULFATE ION
Authors:Jung, S, Spinelli, S, Schimmele, B, Honegger, A, Pugliese, L, Cambillau, C, Pluckthun, A.
Deposit date:2001-02-14
Release date:2001-08-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:The Importance of Framework Residues H6, H7 and H10 in Antibody Heavy Chains: Experimental Evidence for a New Structural Subclassification of Antibody V(H) Domains
J.Mol.Biol., 309, 2001
4HPM
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BU of 4hpm by Molmil
PCGF1 Ub fold (RAWUL)/BCORL1 PUFD Complex
Descriptor: BCL-6 corepressor-like protein 1, PHOSPHATE ION, Polycomb group RING finger protein 1
Authors:Junco, S.E, Wang, R, Gaipa, J, Taylor, A.B, Gearhart, M.D, Bardwell, V.J, Hart, P.J, Kim, C.A.
Deposit date:2012-10-24
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the Polycomb Group Protein PCGF1 in Complex with BCOR Reveals Basis for Binding Selectivity of PCGF Homologs.
Structure, 21, 2013
4HPL
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BU of 4hpl by Molmil
PCGF1 Ub fold (RAWUL)/BCOR PUFD Complex
Descriptor: BCL-6 corepressor, Polycomb group RING finger protein 1
Authors:Junco, S.E, Wang, R, Gaipa, J, Taylor, A.B, Gearhart, M.D, Bardwell, V.J, Hart, P.J, Kim, C.A.
Deposit date:2012-10-24
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Polycomb Group Protein PCGF1 in Complex with BCOR Reveals Basis for Binding Selectivity of PCGF Homologs.
Structure, 21, 2013
3HB0
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BU of 3hb0 by Molmil
Structure of edeya2 complexed with bef3
Descriptor: BERYLLIUM TRIFLUORIDE ION, Eyes absent homolog 2 (Drosophila), MAGNESIUM ION
Authors:Jung, S.K, Jeong, D.G, Ryu, S.E, Kim, S.J.
Deposit date:2009-05-03
Release date:2009-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of ED-Eya2: insight into dual roles as a protein tyrosine phosphatase and a transcription factor
Faseb J., 24, 2010
3HB1
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BU of 3hb1 by Molmil
Crystal structure of ed-eya2 complexed with Alf3
Descriptor: ALUMINUM FLUORIDE, Eyes absent homolog 2 (Drosophila), MAGNESIUM ION
Authors:Jung, S.K, Jeong, D.G, Ryu, S.E, Kim, S.J.
Deposit date:2009-05-03
Release date:2009-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structure of ED-Eya2: insight into dual roles as a protein tyrosine phosphatase and a transcription factor
Faseb J., 24, 2010
2NT2
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BU of 2nt2 by Molmil
Crystal Structure of Slingshot phosphatase 2
Descriptor: Protein phosphatase Slingshot homolog 2, SULFATE ION
Authors:Jung, S.K, Jeong, D.G, Yoon, T.S, Kim, J.H, Ryu, S.E, Kim, S.J.
Deposit date:2006-11-06
Release date:2007-06-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human slingshot phosphatase 2.
Proteins, 68, 2007
1I3G
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BU of 1i3g by Molmil
CRYSTAL STRUCTURE OF AN AMPICILLIN SINGLE CHAIN FV, FORM 1, FREE
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ANTIBODY FV FRAGMENT
Authors:Jung, S, Spinelli, S, Schimmele, B, Honegger, A, Pugliese, L, Cambillau, C, Pluckthun, A.
Deposit date:2001-02-15
Release date:2001-10-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Selection, characterization and x-ray structure of anti-ampicillin single-chain Fv fragments from phage-displayed murine antibody libraries.
J.Mol.Biol., 309, 2001
2ORY
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BU of 2ory by Molmil
Crystal structure of M37 lipase
Descriptor: Lipase
Authors:Jung, S.K, Jeong, D.G, Kim, S.J.
Deposit date:2007-02-05
Release date:2008-01-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the cold adaptation of psychrophilic M37 lipase from Photobacterium lipolyticum.
Proteins, 71, 2008
2MXQ
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BU of 2mxq by Molmil
The solution structure of DEFA1, a highly potent antimicrobial peptide from the horse
Descriptor: Paneth cell-specific alpha-defensin 1
Authors:Jung, S, Michalek, M, Shomali, M, Soennichsen, F.D.
Deposit date:2015-01-12
Release date:2015-04-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure and functional studies of the highly potent equine antimicrobial peptide DEFA1.
Biochem.Biophys.Res.Commun., 459, 2015
2LLR
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BU of 2llr by Molmil
NMR structure of Alvinellacin
Descriptor: Alvinellacin
Authors:Jung, S, Tasiemski, A, Leippe, M, Groetzinger, J.
Deposit date:2011-11-16
Release date:2012-12-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of Alvinellacin
To be Published
2K35
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BU of 2k35 by Molmil
Hydramacin-1: Structure and antibacterial activity of a peptide from the basal metazoan Hydra
Descriptor: hydramacin-1
Authors:Jung, S, Dingley, A.J, Stanisak, M, Gelhaus, C, Bosch, T, Podschun, R, Leippe, M, Gr tzinger, J.
Deposit date:2008-04-22
Release date:2008-11-18
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Hydramacin-1, structure and antibacterial activity of a protein from the Basal metazoan hydra.
J.Biol.Chem., 284, 2009
2LN8
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BU of 2ln8 by Molmil
The solution structure of theromacin
Descriptor: Theromacin
Authors:Jung, S, Soennichsen, F.D, Hung, C.-W, Tholey, A, Boidin-Wichlacz, C, Hausgen, W, Gelhaus, C, Desel, C, Podschun, R, Watzig, V, Tasiemski, A, Leippe, M, Groetzinger, J.
Deposit date:2011-12-20
Release date:2012-03-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Macin family of antimicrobial proteins combines antimicrobial and nerve repair activities.
J.Biol.Chem., 287, 2012
6XJF
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BU of 6xjf by Molmil
X-ray crystal structure of Pyrococcus furiosus general transcription factor TFE-alpha (SeMet labeled protein)
Descriptor: Transcription factor E
Authors:Murakami, K.S, Jun, S.H.
Deposit date:2020-06-23
Release date:2020-07-08
Last modified:2021-01-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
4GKL
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BU of 4gkl by Molmil
Crystal structure of a noncanonic maltogenic alpha-amylase AmyB from Thermotoga neapolitana
Descriptor: Alpha-amylase
Authors:Ha, N.C, Jun, S.Y, Kim, J.S.
Deposit date:2012-08-13
Release date:2013-02-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a novel alpha-amylase AmyB from Thermotoga neapolitana that produces maltose from the nonreducing end of polysaccharides
Acta Crystallogr.,Sect.D, 69, 2013
6PLN
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BU of 6pln by Molmil
X-ray crystal structure of Pyrococcus furiosus general transcription factor TFE-alpha
Descriptor: Transcription factor E
Authors:Murakami, K.S, Jun, S.H.
Deposit date:2019-07-01
Release date:2020-07-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
5G2A
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BU of 5g2a by Molmil
The crystal structure of light-driven chloride pump ClR at pH 6.0 with Bromide ion.
Descriptor: BROMIDE ION, CHLORIDE PUMPING RHODOPSIN, RETINAL
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G54
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BU of 5g54 by Molmil
The crystal structure of light-driven chloride pump ClR at pH 4.5
Descriptor: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-05-19
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016

 

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