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PDB: 77 results

8ON2
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BU of 8on2 by Molmil
NI,FE-CODH -600mV state : 24 h Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ON1
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BU of 8on1 by Molmil
NI,FE-CODH -600mV state : 4 h Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8OMY
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BU of 8omy by Molmil
NI,FE-CODH -600mV state : 35 min Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ON0
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BU of 8on0 by Molmil
NI,FE-CODH -600mV state : 90 min Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
4EMJ
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BU of 4emj by Molmil
Complex between the reductase and ferredoxin components of toluene dioxygenase
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, TodA, ...
Authors:Lin, T.Y, Werther, T, Jeoung, J.H, Dobbek, H.
Deposit date:2012-04-12
Release date:2012-09-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Suppression of Electron Transfer to Dioxygen by Charge Transfer and Electron Transfer Complexes in the FAD-dependent Reductase Component of Toluene Dioxygenase.
J.Biol.Chem., 287, 2012
4C1N
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BU of 4c1n by Molmil
Corrinoid protein reactivation complex with activator
Descriptor: CARBON MONOXIDE DEHYDROGENASE CORRINOID/IRON-SULFUR PROTEIN, GAMMA SUBUNIT, CO DEHYDROGENASE/ACETYL-COA SYNTHASE, ...
Authors:Hennig, S.E, Goetzl, S, Jeoung, J.H, Bommer, M, Lendzian, F, Hildebrandt, P, Dobbek, H.
Deposit date:2013-08-13
Release date:2014-08-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:ATP-Induced Electron Transfer by Redox-Selective Partner Recognition
Nat.Commun., 5, 2014
4EMI
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BU of 4emi by Molmil
Toluene dioxygenase reductase in reduced state in complex with NAD+
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TodA
Authors:Lin, T.Y, Werther, T, Jeoung, J.H, Dobbek, H.
Deposit date:2012-04-12
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.806 Å)
Cite:Suppression of Electron Transfer to Dioxygen by Charge Transfer and Electron Transfer Complexes in the FAD-dependent Reductase Component of Toluene Dioxygenase.
J.Biol.Chem., 287, 2012
8OMX
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BU of 8omx by Molmil
NI,FE-CODH -600mV state : 1 min Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, FE (II) ION, FE(4)-NI(1)-S(5) CLUSTER, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ON3
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BU of 8on3 by Molmil
NI,FE-CODH -320mV + CN state : 24 h Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE (II) ION, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8CJB
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BU of 8cjb by Molmil
A268M variant of the CODH/ACS complex of C. hydrogenoformans
Descriptor: ACETATE ION, CO-methylating acetyl-CoA synthase, Carbon monoxide dehydrogenase, ...
Authors:Ruickoldt, J, Jeoung, J, Lennartz, F, Dobbek, H.
Deposit date:2023-02-13
Release date:2024-02-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Coupling CO2 Reduction and Acetyl-CoA Formation: The Role of a CO Capturing Tunnel in Enzymatic Catalysis.
Angew.Chem.Int.Ed.Engl., 2024
7ZKJ
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BU of 7zkj by Molmil
CODH/ACS complex of C. hydrogenoformans
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
Authors:Ruickoldt, J, Jeoung, J.-H, Basak, Y, Domnik, L, Dobbek, H.
Deposit date:2022-04-13
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:On the Kinetics of CO2 Reduction by Ni, Fe-CO Dehydrogenases
ACS Catal., 2022
7ZKK
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BU of 7zkk by Molmil
A216H variant of the CODH/ACS complex of C. hydrogenoformans
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CO-methylating acetyl-CoA synthase, ...
Authors:Ruickoldt, J, Jeoung, J.-H, Basak, Y, Domnik, L, Dobbek, H.
Deposit date:2022-04-13
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:On the Kinetics of CO2 Reduction by Ni, Fe-CO Dehydrogenases
Acs Catalysis, 2022
7ZXL
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BU of 7zxl by Molmil
H93A Mutant of Recombinant CODH-II
Descriptor: Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2022-05-21
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7ZX6
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BU of 7zx6 by Molmil
I567L Mutant of Recombinant CODH-II
Descriptor: Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2022-05-20
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.447 Å)
Cite:Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
2YCJ
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BU of 2ycj by Molmil
methyltransferase bound with methyltetrahydrofolate
Descriptor: 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, 5-METHYLTETRAHYDROFOLATE CORRINOID/IRON SULFUR PROTEIN METHYLTRANSFERASE, GLYCEROL, ...
Authors:Goetzl, S, Jeoung, J.-H, Hennig, S.E, Dobbek, H.
Deposit date:2011-03-16
Release date:2011-06-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural Basis for Electron and Methyl-Group Transfer in a Methyltransferase System Operating in the Reductive Acetyl-Coa Pathway
J.Mol.Biol., 411, 2011
2YCL
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BU of 2ycl by Molmil
complete structure of the corrinoid,iron-sulfur protein including the N-terminal domain with a 4Fe-4S cluster
Descriptor: CARBON MONOXIDE DEHYDROGENASE CORRINOID/IRON-SULFUR PROTEIN, GAMMA SUBUNIT, CO DEHYDROGENASE/ACETYL-COA SYNTHASE, ...
Authors:Goetzl, S, Jeoung, J.H, Hennig, S.E, Dobbek, H.
Deposit date:2011-03-16
Release date:2011-06-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis for Electron and Methyl-Group Transfer in a Methyltransferase System Operating in the Reductive Acetyl-Coa Pathway
J.Mol.Biol., 411, 2011
7NYS
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BU of 7nys by Molmil
monomeric acetyl-CoA synthase in closed conformation with carbon monoxide bound to the Ni proximal of cluster A
Descriptor: $l^{3}-oxidanylidynemethylnickel, 2-[3,8,8,12,12-pentakis(2-hydroxy-2-oxoethyl)-2,7,11-tris(oxidanylidene)-1,4,6,9,10,13-hexaoxa-5$l^{6}-titanaspiro[4.4^{5}.4^{5}]tridecan-3-yl]ethanoic acid, CHLORIDE ION, ...
Authors:Kreibich, J, Jeoung, J.H, Dobbek, H.
Deposit date:2021-03-23
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand binding at the Ni,Ni-[4Fe-4S] cluster of acetyl-CoA synthase
To Be Published
7NZ5
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BU of 7nz5 by Molmil
monomeric acetyl-CoA synthase with Zn at the proximal position of cluster A
Descriptor: (R,R)-2,3-BUTANEDIOL, 2-[3,8,8,12,12-pentakis(2-hydroxy-2-oxoethyl)-2,7,11-tris(oxidanylidene)-1,4,6,9,10,13-hexaoxa-5$l^{6}-titanaspiro[4.4^{5}.4^{5}]tridecan-3-yl]ethanoic acid, CITRIC ACID, ...
Authors:Kreibich, J, Jeoung, J.H, Dobbek, H.
Deposit date:2021-03-23
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ligand binding at the Ni,Ni-[4Fe-4S] cluster of acetyl-CoA synthase
To Be Published
7O0D
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BU of 7o0d by Molmil
monomeric acetyl-CoA synthase in open conformation with methanethiol moiety of CoA bound to nickel proximal
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CO-methylating acetyl-CoA synthase, ...
Authors:Kreibich, J, Jeoung, J.H, Dobbek, H.
Deposit date:2021-03-26
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ligand binding at the Ni,Ni-[4Fe-4S] cluster of acetyl-CoA synthase
To Be Published
7NYP
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BU of 7nyp by Molmil
monomeric acetyl-CoA synthase in closed conformation
Descriptor: 2-[3,8,8,12,12-pentakis(2-hydroxy-2-oxoethyl)-2,7,11-tris(oxidanylidene)-1,4,6,9,10,13-hexaoxa-5$l^{6}-titanaspiro[4.4^{5}.4^{5}]tridecan-3-yl]ethanoic acid, CO-methylating acetyl-CoA synthase, DI(HYDROXYETHYL)ETHER, ...
Authors:Kreibich, J, Jeoung, J.H, Dobbek, H.
Deposit date:2021-03-23
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Ligand binding at the Ni,Ni-[4Fe-4S] cluster of acetyl-CoA synthase
To Be Published
2YCI
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BU of 2yci by Molmil
methyltransferase native
Descriptor: 5-METHYLTETRAHYDROFOLATE CORRINOID/IRON SULFUR PROTEIN METHYLTRANSFERASE, SULFATE ION
Authors:Goetzl, S, Jeoung, J.H, Hennig, S.E, Dobbek, H.
Deposit date:2011-03-16
Release date:2011-06-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural Basis for Electron and Methyl-Group Transfer in a Methyltransferase System Operating in the Reductive Acetyl-Coa Pathway
J.Mol.Biol., 411, 2011
7ZXJ
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BU of 7zxj by Molmil
K563A Mutant of Recombinant CODH-II
Descriptor: Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE (II) ION, ...
Authors:Basak, Y, Jeoung, J.H, Dobbek, H.
Deposit date:2022-05-21
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.249 Å)
Cite:Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7ZXX
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BU of 7zxx by Molmil
K563H Mutant of Recombinant CODH-II
Descriptor: Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Basak, Y, Jeoung, J.H, Dobbek, H.
Deposit date:2022-05-23
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7ZY1
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BU of 7zy1 by Molmil
I567A Mutant of Recombinant CODH-II
Descriptor: Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
Authors:Basak, Y, Jeoung, J.H, Dobbek, H.
Deposit date:2022-05-23
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.434 Å)
Cite:Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
7ZXC
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BU of 7zxc by Molmil
H96D Mutant of Recombinant CODH-II
Descriptor: Carbon monoxide dehydrogenase 2, FE (III) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
Authors:Basak, Y, Jeoung, J.H, Dobbek, H.
Deposit date:2022-05-20
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022

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PDB entries from 2024-07-17

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