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PDB: 2129 件

7QWT
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BU of 7qwt by Molmil
Rieske non-heme iron monooxygenase for guaiacol O-demethylation
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Rieske (2Fe-2S) domain protein
著者Hinchen, D.J, Zahn, M, Bleem, A, Beckham, G.T, McGeehan, J.E.
登録日2022-01-25
公開日2022-06-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.712 Å)
主引用文献Discovery, characterization, and metabolic engineering of Rieske non-heme iron monooxygenases for guaiacol O-demethylation
Chem Catal, 2022
2VIX
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BU of 2vix by Molmil
Methylated Shigella flexneri MxiC
分子名称: ACETATE ION, GLYCEROL, PROTEIN MXIC
著者Deane, J.E, Roversi, P, King, C, Johnson, S, Lea, S.M.
登録日2007-12-05
公開日2008-03-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structures of the Shigella Flexneri Type 3 Secretion System Protein Mxic Reveal Conformational Variability Amongst Homologues.
J.Mol.Biol., 377, 2008
6DJD
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BU of 6djd by Molmil
Crystal structure of Tdp1 catalytic domain in complex with Zenobia fragment ZT1982 (single soak)
分子名称: 1,2-ETHANEDIOL, 4-hydroxyquinoline-3-carboxylic acid, Tyrosyl-DNA phosphodiesterase 1
著者Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Burke Jr, T.R, Pommier, Y, Waugh, D.S.
登録日2018-05-25
公開日2019-05-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.777 Å)
主引用文献Identification of a ligand binding hot spot and structural motifs replicating aspects of tyrosyl-DNA phosphodiesterase I (TDP1) phosphoryl recognition by crystallographic fragment cocktail screening.
Nucleic Acids Res., 2019
1U2S
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BU of 1u2s by Molmil
X-Ray structure of the sucrose-phosphatase (SPP) from Synechocystis sp. PCC6803 in complex with glucose
分子名称: MAGNESIUM ION, alpha-D-glucopyranose, sucrose-phosphatase
著者Fieulaine, S, Lunn, J.E, Borel, F, Ferrer, J.-L.
登録日2004-07-20
公開日2005-06-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The structure of a cyanobacterial sucrose-phosphatase reveals the sugar tongs that release free sucrose in the cell
PLANT CELL, 17, 2005
5D5L
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BU of 5d5l by Molmil
PreQ1-II riboswitch with an engineered G-U wobble pair bound to Cs+
分子名称: 7-DEAZA-7-AMINOMETHYL-GUANINE, CESIUM ION, MAGNESIUM ION, ...
著者Wedekind, J.E, Liberman, J.A, Salim, M.
登録日2015-08-10
公開日2016-08-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Cesium(I) binding to G-U-wobble base pairs in preQ1 riboswitches with implications for crystallographic phasing
to be published
1DLE
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BU of 1dle by Molmil
FACTOR B SERINE PROTEASE DOMAIN
分子名称: COMPLEMENT FACTOR B
著者Jing, H, Xu, Y, Carson, M, Moore, D, Macon, K.J, Volanakis, J.E, Narayana, S.V.
登録日1999-12-09
公開日2000-12-13
最終更新日2019-11-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献New structural motifs on the chymotrypsin fold and their potential roles in complement factor B.
EMBO J., 19, 2000
4Y2E
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BU of 4y2e by Molmil
Crystal structure of the catalytic domain of human dual-specificity phosphatase 7 (C232S)
分子名称: Dual specificity protein phosphatase 7, PHOSPHATE ION
著者Lountos, G.T, Austin, B.P, Tropea, J.E, Waugh, D.S.
登録日2015-02-09
公開日2015-06-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structure of human dual-specificity phosphatase 7, a potential cancer drug target.
Acta Crystallogr.,Sect.F, 71, 2015
2WG8
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BU of 2wg8 by Molmil
Structure of Oryza Sativa (Rice) PLA2, orthorhombic crystal form
分子名称: CALCIUM ION, PUTATIVE PHOSPHOLIPASE A2, SODIUM ION
著者Guy, J.E, Stahl, U, Lindqvist, Y.
登録日2009-04-16
公開日2009-06-02
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of a Class Xib Phospholipase A2 (Pla2): Rice (Oryza Sativa) Isoform-2 Pla2 and an Octanoate Complex.
J.Biol.Chem., 284, 2009
2WAB
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BU of 2wab by Molmil
Structure of an active site mutant of a family two carbohydrate esterase from Clostridium thermocellum in complex with celluohexase
分子名称: ENDOGLUCANASE E, GLYCEROL, IODIDE ION, ...
著者Montainer, C, Money, V.A, Pires, V.M.R, Flint, J.E, Pinheiro, B.A, Goyal, A, Prates, J.A.M, Izumi, A, Stalbrand, H, Kolenova, K, Topakas, E, Dodson, E.J, Bolam, D.N, Davies, G.J, Fontes, C.M.G.A, Gilbert, H.J.
登録日2009-02-04
公開日2009-03-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Active Site of a Carbohydrate Esterase Displays Divergent Catalytic and Noncatalytic Binding Functions.
Plos Biol., 7, 2009
8VGQ
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BU of 8vgq by Molmil
CryoEM structure of GNE-1952-alkylated KRAS G12C in complex with engineered conformationally rigid Fab 2H11.4DS
分子名称: 1-{4-[(7M)-6-methyl-7-(5-methyl-2H-indazol-4-yl)quinazolin-4-yl]piperazin-1-yl}propan-1-one, Fab 2H11.4DS heavy chain, Fab 2H11.4DS light chain, ...
著者Kung, J.E, Sudhamsu, J.
登録日2023-12-27
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
6BVB
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BU of 6bvb by Molmil
Crystal structure of HIF-2alpha-pVHL-elongin B-elongin C
分子名称: Elongin-B, Elongin-C, Hypoxia-Inducible Factor 2 alpha, ...
著者Tarade, D, Ohh, M, Lee, J.E.
登録日2017-12-12
公開日2018-08-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献HIF-2 alpha-pVHL complex reveals broad genotype-phenotype correlations in HIF-2 alpha-driven disease.
Nat Commun, 9, 2018
8VGJ
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BU of 8vgj by Molmil
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.4DS
分子名称: Fab E104.v1.4DS heavy chain, Fab E104.v1.4DS light chain, Tryptase alpha/beta-1
著者Kung, J.E, Johnson, M.C, Sudhamsu, J.
登録日2023-12-27
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
8VGI
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BU of 8vgi by Molmil
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.2DS
分子名称: Fab E104.v1.2DS heavy chain, Fab E104.v1.2DS light chain, Tryptase alpha/beta-1
著者Kung, J.E, Johnson, M.C, Sudhamsu, J.
登録日2023-12-27
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
8VGK
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BU of 8vgk by Molmil
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.6DS
分子名称: Fab E104.v1.6DS light chain, Tryptase alpha/beta-1
著者Kung, J.E, Johnson, M.C, Sudhamsu, J.
登録日2023-12-27
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
2WG7
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BU of 2wg7 by Molmil
Structure of Oryza Sativa (Rice) PLA2
分子名称: CALCIUM ION, PUTATIVE PHOSPHOLIPASE A2, SODIUM ION
著者Guy, J.E, Stahl, U, Lindqvist, Y.
登録日2009-04-16
公開日2009-06-02
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of a Class Xib Phospholipase A2 (Pla2): Rice (Oryza Sativa) Isoform-2 Pla2 and an Octanoate Complex.
J.Biol.Chem., 284, 2009
5EEY
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BU of 5eey by Molmil
RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 11.6 MGy
分子名称: (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB
著者Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B.
登録日2015-10-23
公開日2016-05-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献RNA protects a nucleoprotein complex against radiation damage.
Acta Crystallogr D Struct Biol, 72, 2016
6BOY
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BU of 6boy by Molmil
Crystal structure of DDB1-CRBN-BRD4(BD1) complex bound to dBET6 PROTAC.
分子名称: 2-[(6S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl]-N-(8-{[({2-[(3S)-2,6-dioxopiperidin-3-yl]-1,3-dioxo-2,3-dihydro-1H-isoindol-4-yl}oxy)acetyl]amino}octyl)acetamide, Bromodomain-containing protein 4, DNA damage-binding protein 1, ...
著者Nowak, R.P, DeAngelo, S.L, Buckley, D, Bradner, J.E, Fischer, E.S.
登録日2017-11-21
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.33 Å)
主引用文献Plasticity in binding confers selectivity in ligand-induced protein degradation.
Nat. Chem. Biol., 14, 2018
1RRI
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BU of 1rri by Molmil
DHNA complex with 3-(5-amino-7-hydroxy-[1,2,3] triazolo [4,5-d]pyrimidin-2-yl)-benzoic acid
分子名称: 3-(5-AMINO-7-HYDROXY-[1,2,3]TRIAZOLO[4,5-D]PYRIMIDIN-2-YL)-BENZOIC ACID, Dihydroneopterin aldolase
著者Sanders, W.J, Nienaber, V.L, Lerner, C.G, McCall, J.O, Merrick, S.M, Swanson, S.J, Harlan, J.E, Stoll, V.S, Stamper, G.F, Betz, S.F, Condroski, K.R, Meadows, R.P, Severin, J.M, Walter, K.A, Magdalinos, P, Jakob, C.G, Wagner, R, Beutel, B.A.
登録日2003-12-08
公開日2004-03-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of Potent Inhibitors of Dihydroneopterin Aldolase Using CrystaLEAD High-Throughput X-ray Crystallographic Screening and Structure-Directed Lead Optimization.
J.Med.Chem., 47, 2004
8VGP
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BU of 8vgp by Molmil
CryoEM structure of Angiopoietin-2 in complex with engineered conformationally rigid Fab 5A12.6DS
分子名称: Angiopoietin-2, CALCIUM ION, Fab 5A12.6DS heavy chain, ...
著者Kung, J.E, Sudhamsu, J.
登録日2023-12-27
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
5EEZ
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BU of 5eez by Molmil
RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 14.2 MGy
分子名称: (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB
著者Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B.
登録日2015-10-23
公開日2016-05-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献RNA protects a nucleoprotein complex against radiation damage.
Acta Crystallogr D Struct Biol, 72, 2016
4GON
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BU of 4gon by Molmil
Crystal Structure of E. coli DNA Adenine Methyltransferase in Complex with Indole Aza-SAM
分子名称: 5'-{[(3S)-3-amino-3-carboxypropyl][2-(1H-indol-3-yl)ethyl]amino}-5'-deoxyadenosine, DNA adenine methylase
著者Harmer, J.E, Roach, P.L.
登録日2012-08-20
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Structural Basis of Selective N-6 adenine methyltransferase Inhibition by Transition State Mimic
To be published
1R18
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BU of 1r18 by Molmil
Drosophila protein isoaspartyl methyltransferase with S-adenosyl-L-homocysteine
分子名称: Protein-L-isoaspartate(D-aspartate)-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Bennett, E.J, Bjerregaard, J, Knapp, J.E, Chavous, D.A, Friedman, A.M, Royer Jr, W.E, O'Connor, C.M.
登録日2003-09-23
公開日2003-12-09
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Catalytic implications from the Drosophila protein L-isoaspartyl methyltransferase structure and site-directed mutagenesis.
Biochemistry, 42, 2003
5ELB
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BU of 5elb by Molmil
Cholera toxin classical B-pentamer in complex with Lewis-y
分子名称: BICINE, CALCIUM ION, Cholera enterotoxin B subunit, ...
著者Heggelund, J.E, Burschowsky, D, Krengel, U.
登録日2015-11-04
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献High-Resolution Crystal Structures Elucidate the Molecular Basis of Cholera Blood Group Dependence.
Plos Pathog., 12, 2016
2VYO
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BU of 2vyo by Molmil
Chitin deacetylase family member from Encephalitozoon cuniculi
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Urch, J.E, Hurtado-Guerrero, R, Texier, C, Van Aalten, D.M.F.
登録日2008-07-25
公開日2008-08-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Functional Characterization of a Putative Polysaccharide Deacetylase of the Human Parasite Encephalitozoon Cuniculi.
Protein Sci., 18, 2009
5EF0
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BU of 5ef0 by Molmil
RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 16.7 MGy
分子名称: (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB
著者Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B.
登録日2015-10-23
公開日2016-05-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献RNA protects a nucleoprotein complex against radiation damage.
Acta Crystallogr D Struct Biol, 72, 2016

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