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PDB: 42507 results

3L3J
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Crystal structure of HLA-B*4402 in complex with the F3A/R5A double mutant of a self-peptide derived from DPA*0201
Descriptor: ACETATE ION, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Theodossis, A, Ely, L.K, Rossjohn, J.
Deposit date:2009-12-17
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Constraints within major histocompatibility complex class I restricted peptides: presentation and consequences for T-cell recognition
Proc.Natl.Acad.Sci.USA, 107, 2010
3L3U
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BU of 3l3u by Molmil
Crystal structure of the HIV-1 integrase core domain to 1.4A
Descriptor: POL polyprotein, SULFATE ION
Authors:Wielens, J, Chalmers, D.K, Scanlon, M.J, Parker, M.W.
Deposit date:2009-12-17
Release date:2010-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the HIV-1 integrase core domain in complex with sucrose reveals details of an allosteric inhibitory binding site.
Febs Lett., 584, 2010
4AFU
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Human Chymase - Fynomer Complex
Descriptor: CHYMASE, FYNOMER
Authors:Schlatter, D, Brack, S, Banner, D.W, Batey, S, Benz, J, Bertschinger, J, Huber, W, Joseph, C, Rufer, A, Van Der Kloosters, A, Weber, M, Grabulovski, D, Hennig, M.
Deposit date:2012-01-23
Release date:2012-07-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Generation, Characterization and Structural Data of Chymase Binding Proteins Based on the Human Fyn Kinase SH3 Domain.
Mabs, 4, 2012
6CUS
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BU of 6cus by Molmil
HADDOCK structure of the Rous sarcoma virus matrix protein (M-domain) in complex with myo-inositol hexakisphosphate
Descriptor: INOSITOL HEXAKISPHOSPHATE, Matrix protein p19
Authors:Vlach, J, Saad, J.S.
Deposit date:2018-03-26
Release date:2018-10-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for targeting avian sarcoma virus Gag polyprotein to the plasma membrane for virus assembly.
J. Biol. Chem., 293, 2018
2NSK
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BU of 2nsk by Molmil
Doubled Modified Selenium DNA
Descriptor: 5'-D(*GP*(UMS)P*GP*(T4S)P*AP*CP*AP*C)-3'
Authors:Jiang, J, Shen, J, Huang, Z.
Deposit date:2006-11-04
Release date:2006-11-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Double Modified Selinium DNA [G(Use)G(Tse)ACAC]
To be Published
7OXI
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ttSlyD with W4A pseudo-wild-type S2 peptide
Descriptor: 30S ribosomal protein S2, CHLORIDE ION, Peptidyl-prolyl cis-trans isomerase
Authors:Pazicky, S, Lei, J, Loew, C.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
7OXK
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ttSlyD with W4K pseudo-wild-type S2 peptide
Descriptor: 30S ribosomal protein S2, Peptidyl-prolyl cis-trans isomerase
Authors:Pazicky, S, Lei, J, Loew, C.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
7OXJ
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ttSlyD with M8A pseudo-wild-type S2 peptide
Descriptor: 30S ribosomal protein S2, CHLORIDE ION, Fragment of 30S ribosomal protein S2 peptide, ...
Authors:Pazicky, S, Lei, J, Loew, C.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
7OXG
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ttSlyD FKBP domain with M8A pseudo-wild-type S2 peptide
Descriptor: 30S ribosomal protein S2, CHLORIDE ION, IMIDAZOLE, ...
Authors:Pazicky, S, Lei, J, Loew, C.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
7OXH
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ttSlyD with pseudo-wild-type S2 peptide
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 30S ribosomal protein S2, CHLORIDE ION, ...
Authors:Pazicky, S, Lei, J, Loew, C.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
4AP7
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BU of 4ap7 by Molmil
Crystal structure of C-MET kinase domain in complex with 4-((6-(4- fluorophenyl)-(1,2,4)triazolo(4,3-b)(1,2,4)triazin-3-yl)methyl)phenol
Descriptor: 4-[[6-(4-fluorophenyl)-[1,2,4]triazolo[4,3-b][1,2,4]triazin-3-yl]methyl]phenol, HEPATOCYTE GROWTH FACTOR RECEPTOR
Authors:McTigue, M, Wickersham, J.
Deposit date:2012-03-30
Release date:2012-09-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of a Novel Class of Exquisitely Selective Mesenchymal-Epithelial Transition Factor (C-met) Protein Kinase Inhibitors and Identification of the Clinical Candidate 2-(4-(1-(Quinolin-6-Ylmethyl)-1H-[1,2, 3]Triazolo[4,5-B]Pyrazin-6-Yl)-1H-Pyrazol-1-Yl)Ethanol (Pf-04217903) for the Treatment of Cancer.
J.Med.Chem., 55, 2012
7OUO
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Crystal structure of RNA duplex [UCGUGCGA]2 in complex with Ba2+ cation
Descriptor: BARIUM ION, RNA (5'-R(*UP*CP*GP*UP*GP*CP*GP*A)-3')
Authors:Ruszkowski, M, Mao, S, Zheng, Y.Y, Ruszkowska, A, Sheng, J.
Deposit date:2021-06-12
Release date:2022-03-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.212 Å)
Cite:Structural Insights Into the 5'UG/3'GU Wobble Tandem in Complex With Ba 2+ Cation.
Front Mol Biosci, 8, 2021
6CUP
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BU of 6cup by Molmil
Ras:SOS:Ras in complex with a small molecule activator
Descriptor: FORMIC ACID, GLYCEROL, GTPase HRas, ...
Authors:Phan, J, Abbott, J, Fesik, S.W.
Deposit date:2018-03-26
Release date:2019-02-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.833 Å)
Cite:Discovery of Quinazolines That Activate SOS1-Mediated Nucleotide Exchange on RAS.
ACS Med Chem Lett, 9, 2018
2GV0
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BU of 2gv0 by Molmil
The structure of the orthorhombic form of soft-shelled turtle lysozyme at 1.9 angstroms resolution
Descriptor: Lysozyme C, SULFATE ION
Authors:Siritapetawee, J, Thammasirirak, S, Yuvaniyama, J, Robinson, R.C.
Deposit date:2006-05-02
Release date:2007-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallization and the 1.9 angstroms of the egg-white lysozyme from a taiwanese soft-shelled turtle (trionyx sinensis wiegmann)
to be published
4AQH
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BU of 4aqh by Molmil
Plasminogen activator inhibitor type-1 in complex with the inhibitor AZ3976
Descriptor: PLASMINOGEN ACTIVATOR INHIBITOR 1, TERT-BUTYL 3-[(4-OXO-3H-PYRIDO[2,3-D]PYRIMIDIN-2-YL)AMINO]AZETIDINE-1-CARBOXYLATE
Authors:Fjellstrom, O, Deinum, J, Sjogren, T, Johansson, C, Geschwindner, S, Nerme, V, Legnehed, A, McPheat, J, Olsson, K, Bodin, C, Gustafsson, D.
Deposit date:2012-04-17
Release date:2012-11-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterization of a Small Molecule Inhibitor of Plasminogen Activator Inhibitor Type 1 that Accelerates the Transition Into the Latent Conformation
J.Biol.Chem., 288, 2013
2NY0
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BU of 2ny0 by Molmil
HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, T257S, V275C, S334A, S375W, A433M) Complexed with CD4 and Antibody 17b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ...
Authors:Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
Deposit date:2006-11-20
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
4A6J
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BU of 4a6j by Molmil
Structural model of ParM filament based on CryoEM map
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLASMID SEGREGATION PROTEIN PARM
Authors:Gayathri, P, Fujii, T, Moller-Jensen, J, Van Den Ent, F, Namba, K, Lowe, J.
Deposit date:2011-11-04
Release date:2012-11-21
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:A Bipolar Spindle of Antiparallel Parm Filaments Drives Bacterial Plasmid Segregation.
Science, 338, 2012
3L3D
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BU of 3l3d by Molmil
Crystal structure of HLA-B*4402 in complex with the F3A mutant of a self-peptide derived from DPA*0201
Descriptor: ACETATE ION, Beta-2-microglobulin, GLYCEROL, ...
Authors:Theodossis, A, Ely, L.K, Rossjohn, J.
Deposit date:2009-12-16
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Constraints within major histocompatibility complex class I restricted peptides: presentation and consequences for T-cell recognition
Proc.Natl.Acad.Sci.USA, 107, 2010
2O1Z
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BU of 2o1z by Molmil
Plasmodium vivax Ribonucleotide Reductase Subunit R2 (Pv086155)
Descriptor: FE (III) ION, Ribonucleotide Reductase Subunit R2, UNKNOWN ATOM OR ION
Authors:Dong, A, Tempel, W, Qiu, W, Lew, J, Wernimont, A.K, Lin, Y.H, Hassanali, A, Melone, M, Zhao, Y, Nordlund, P, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Artz, J.D, Amani, M, Structural Genomics Consortium (SGC)
Deposit date:2006-11-29
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Plasmodium vivax Ribonucleotide Reductase Subunit R2 (Pv086155)
To be Published
4A9G
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BU of 4a9g by Molmil
Symmetrized cryo-EM reconstruction of E. coli DegQ 24-mer in complex with beta-casein
Descriptor: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ
Authors:Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R.
Deposit date:2011-11-26
Release date:2012-01-11
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq
Nat.Struct.Mol.Biol., 19, 2012
6BHG
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BU of 6bhg by Molmil
Crystal structure of SETDB1 with a modified H3 peptide
Descriptor: Histone H3.1, Histone-lysine N-methyltransferase SETDB1, UNKNOWN ATOM OR ION
Authors:Qin, S, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-10-30
Release date:2017-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:H3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1.
Nat Commun, 8, 2017
3DG0
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BU of 3dg0 by Molmil
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complex
Descriptor: 16S Ribosomal RNA from E. coli, 23S Ribosomal RNA from E. coli
Authors:Gao, H, LeBarron, J, Frank, J.
Deposit date:2008-06-12
Release date:2009-02-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (10.8 Å)
Cite:Ribosomal Dynamics: Intrinsic Instability of a Moleculaar Machine
To be published
4ABY
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BU of 4aby by Molmil
Crystal structure of Deinococcus radiodurans RecN head domain
Descriptor: DNA REPAIR PROTEIN RECN
Authors:Pellegrino, S, Radzimanowski, J, de Sanctis, D, McSweeney, S, Timmins, J.
Deposit date:2011-12-12
Release date:2012-12-12
Last modified:2012-12-26
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and Functional Characterization of an Smc-Like Protein Recn: New Insights Into Double-Strand Break Repair.
Structure, 20, 2012
3DH1
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BU of 3dh1 by Molmil
Crystal structure of human tRNA-specific adenosine-34 deaminase subunit ADAT2
Descriptor: ZINC ION, tRNA-specific adenosine deaminase 2
Authors:Welin, M, Tresaugues, L, Andersson, J, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Schueler, H, Thorsell, A.G, van der Berg, S, Wisniewska, M, Wikstrom, M, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2008-06-16
Release date:2008-09-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of human tRNA-specific adenosine-34 deaminase subunit ADAT2.
To be Published
3L3K
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BU of 3l3k by Molmil
Crystal structure of HLA-B*4402 in complex with the R5A/F7A double mutant of a self-peptide derived from DPA*0201
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Theodossis, A, Ely, L.K, Rossjohn, J.
Deposit date:2009-12-17
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Constraints within major histocompatibility complex class I restricted peptides: presentation and consequences for T-cell recognition
Proc.Natl.Acad.Sci.USA, 107, 2010

223790

数据于2024-08-14公开中

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