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PDB: 42550 results

4PBC
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BU of 4pbc by Molmil
X-ray crystal structure of a putative D-amino acid aminotransferase from Burkholderia cenocepacia
Descriptor: D-amino acid aminotransferase, PHOSPHATE ION
Authors:Fairman, J.W, Abendroth, J, Edwards, T.E, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-04-12
Release date:2014-07-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of a putative D-amino acid aminotransferase from Burkholderia cenocepacia
To Be Published
5FNF
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BU of 5fnf by Molmil
Dynamic Undocking and the Quasi-Bound State as tools for Drug Design
Descriptor: 4-[(E)-N-oxidanyl-C-pyridin-3-yl-carbonimidoyl]benzene-1,3-diol, HEAT SHOCK PROTEIN, HSP90-ALPHA, ...
Authors:Ruiz-Carmona, S, Schmidtke, P, Luque, F.J, Baker, L.M, Matassova, N, Davis, B, Roughley, S, Murray, J, Hubbard, R, Barril, X.
Deposit date:2015-11-13
Release date:2016-11-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dynamic undocking and the quasi-bound state as tools for drug discovery.
Nat Chem, 9, 2017
5YNY
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BU of 5yny by Molmil
Structure of house dust mite allergen Der F 21 in PEG2KMME
Descriptor: Allergen Der f 21
Authors:Ng, C.L, Chew, F.T, Pang, S.L, Ho, K.L, Teh, A.H, Waterman, J, Rambo, R, Mathavan, I.
Deposit date:2017-10-25
Release date:2019-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and epitope analysis of house dust mite allergen Der f 21.
Sci Rep, 9, 2019
4PMD
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BU of 4pmd by Molmil
Crystal structure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with hydrolyzed xylotetraose
Descriptor: Endo-1,4-beta-xylanase, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:An, J, Feng, Y, Wu, G.
Deposit date:2014-05-21
Release date:2015-06-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with hydrolyzed xylotetraose
to be published
5FCI
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BU of 5fci by Molmil
Structure of the vacant uL3 W255C mutant 80S yeast ribosome
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Mailliot, J, Garreau de Loubresse, N, Yusupova, G, Dinman, J.D, Yusupov, M.
Deposit date:2015-12-15
Release date:2016-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structures of the uL3 Mutant Ribosome: Illustration of the Importance of Ribosomal Proteins for Translation Efficiency.
J.Mol.Biol., 428, 2016
5G0V
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BU of 5g0v by Molmil
InhA in complex with a DNA encoded library hit
Descriptor: ENOYL-ACYL CARRIER PROTEIN REDUCTASE, MAGNESIUM ION, N-[2-(methylamino)-2-oxidanylidene-ethyl]-2-(4-pyrazol-1-ylphenyl)-N-(1-pyridin-2-ylpiperidin-4-yl)ethanamide, ...
Authors:Read, J.A, Breed, J.
Deposit date:2016-03-22
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Discovery of Cofactor-Specific, Bactericidal Mycobacterium Tuberculosis Inha Inhibitors Using DNA-Encoded Library Technology
Proc.Natl.Acad.Sci.USA, 113, 2016
4PNS
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BU of 4pns by Molmil
Crystal Structure of human Tankyrase 2 in complex with INH2BP.
Descriptor: 6-amino-5-iodo-2H-chromen-2-one, GLYCEROL, Tankyrase-2, ...
Authors:Qiu, W, Lam, R, Romanov, V, Gordon, R, Gebremeskel, S, Vodsedalek, J, Thompson, C, Beletskaya, I, Battaile, K.P, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-05-25
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Insights into the binding of PARP inhibitors to the catalytic domain of human tankyrase-2.
Acta Crystallogr.,Sect.D, 70, 2014
8JL3
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BU of 8jl3 by Molmil
membrane proteins
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYL COENZYME *A, ...
Authors:Yu, J, Ge, J.P, Xu, R.S.
Deposit date:2023-06-02
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:membrane proteins
To Be Published
5FS5
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BU of 5fs5 by Molmil
Breaking down the wall: mutation of the tyrosine gate of the universal Escherichia coli fimbrial adhesin FimH
Descriptor: FIMH, SODIUM ION, heptyl alpha-D-mannopyranoside
Authors:Bouckaert, J.
Deposit date:2015-12-30
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Mutation of Tyr137 of the universal Escherichia coli fimbrial adhesin FimH relaxes the tyrosine gate prior to mannose binding.
IUCrJ, 4, 2017
8J4T
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BU of 8j4t by Molmil
GajA-GajB complex
Descriptor: Endonuclease GajA, Gabija protein GajB
Authors:Wei, T, Ma, J, Huo, Y.
Deposit date:2023-04-20
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural and biochemical insights into the mechanism of the Gabija bacterial immunity system.
Nat Commun, 15, 2024
4PR6
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BU of 4pr6 by Molmil
A Second Look at the HDV Ribozyme Structure and Dynamics.
Descriptor: HDV RIBOZYME SELF-CLEAVED, MAGNESIUM ION, U1 small nuclear ribonucleoprotein A
Authors:Kapral, G.J, Jain, S, Noeske, J, Doudna, J.A, Richardson, D.C, Richardson, J.S.
Deposit date:2014-03-05
Release date:2014-10-29
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:New tools provide a second look at HDV ribozyme structure, dynamics and cleavage.
Nucleic Acids Res., 42, 2014
5FN7
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BU of 5fn7 by Molmil
Crystal structure of human CD45 extracellular region, domains d1-d2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MERCURY (II) ION, RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE C
Authors:Chang, V.T, Fernandes, R.A, Ganzinger, K.A, Lee, S.F, Siebold, C, McColl, J, Jonsson, P, Palayret, M, Harlos, K, Coles, C.H, Jones, E.Y, Lui, Y, Huang, E, Gilbert, R.J.C, Klenerman, D, Aricescu, A.R, Davis, S.J.
Deposit date:2015-11-10
Release date:2016-03-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Initiation of T Cell Signaling by Cd45 Segregation at 'Close Contacts'.
Nat.Immunol., 17, 2016
1AJK
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BU of 1ajk by Molmil
CIRCULARLY PERMUTED (1-3,1-4)-BETA-D-GLUCAN 4-GLUCANOHYDROLASE CPA16M-84
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CIRCULARLY PERMUTED (1-3,1-4)-BETA-D-GLUCAN 4-GLUCANOHYDROLASE, ...
Authors:Ay, J, Heinemann, U.
Deposit date:1997-05-06
Release date:1998-05-06
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures and properties of de novo circularly permuted 1,3-1,4-beta-glucanases.
Proteins, 30, 1998
8IVP
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BU of 8ivp by Molmil
Crystal structure of MV in complex with LLP and FRU from Mycobacterium vanbaalenii
Descriptor: Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase, D-fructose
Authors:Li, Q, Zhu, Y.M, Gao, J, Wei, H.L, Han, X, Liu, W.D, Sun, Y.X.
Deposit date:2023-03-28
Release date:2024-01-24
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of MV in complex with LLP and FRU from Mycobacterium vanbaalenii
To Be Published
8JL4
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BU of 8jl4 by Molmil
membrane proteins
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Yu, J, Ge, J.P, Xu, R.S.
Deposit date:2023-06-02
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:membrane proteins
To Be Published
5DS0
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BU of 5ds0 by Molmil
Crystal structure of TET aminopeptidase from marine sediment archaeon Thaumarchaeota archaeon SCGC AB-539-E09
Descriptor: COBALT (II) ION, GLYCEROL, Peptidase M42
Authors:Michalska, K, Chhor, G, Mootz, J, Endres, M, Jedrzejczak, R, Babnigg, G, Steen, A, Lloyd, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-09-16
Release date:2015-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of TET aminopeptidase from marine sediment archaeon Thaumarchaeota archaeon SCGC AB-539-E09
To Be Published
5DUO
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BU of 5duo by Molmil
Crystal structure of native translocator protein 18kDa (TSPO) from Rhodobacter sphaeroides (A139T Mutant) in C2 space group
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, FORMIC ACID, PROTOPORPHYRIN IX, ...
Authors:Li, F, Liu, J, Zheng, Y, Garavito, R.M, Ferguson-Miller, S.
Deposit date:2015-09-20
Release date:2015-11-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Response to Comment on "Crystal structures of translocator protein (TSPO) and mutant mimic of a human polymorphism".
Science, 350, 2015
1YE9
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BU of 1ye9 by Molmil
Crystal structure of proteolytically truncated catalase HPII from E. coli
Descriptor: CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, catalase HPII
Authors:Loewen, P.C, Chelikani, P, Carpena, X, Fita, I, Perez-Luque, R, Donald, L.J, Switala, J, Duckworth, H.W.
Deposit date:2004-12-28
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of a Large Subunit Catalase Truncated by Proteolytic Cleavage(,)
Biochemistry, 44, 2005
8J0Y
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BU of 8j0y by Molmil
Crystal structure of horse spleen L-ferritin at 20deg Celsius.
Descriptor: CADMIUM ION, CHLORIDE ION, Ferritin light chain, ...
Authors:Maity, B, Tian, J, Abe, S, Ueno, T.
Deposit date:2023-04-12
Release date:2023-05-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
3P8H
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BU of 3p8h by Molmil
Crystal structure of L3MBTL1 (MBT repeat) in complex with a nicotinamide antagonist
Descriptor: 3-bromo-5-[(4-pyrrolidin-1-ylpiperidin-1-yl)carbonyl]pyridine, GLYCEROL, Lethal(3)malignant brain tumor-like protein, ...
Authors:Lam, R, Herold, J.M, Ouyang, H, Tempel, W, Gao, C, Ravichandran, M, Senisterra, G, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Vedadi, M, Kireev, D, Frye, S.V, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2010-10-13
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Small-molecule ligands of methyl-lysine binding proteins.
J.Med.Chem., 54, 2011
1XB7
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BU of 1xb7 by Molmil
X-ray structure of ERRalpha LBD in complex with a PGC-1alpha peptide at 2.5A resolution
Descriptor: IODIDE ION, Peroxisome proliferator activated receptor gamma coactivator 1 alpha, Steroid hormone receptor ERR1
Authors:Kallen, J, Schlaeppi, J.M, Bitsch, F, Filipuzzi, I, Schilb, A, Riou, V, Graham, A, Strauss, A, Geiser, M, Fournier, B.
Deposit date:2004-08-30
Release date:2004-09-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Evidence for Ligand-independent Transcriptional Activation of the Human Estrogen-related Receptor {alpha} (ERR{alpha}): CRYSTAL STRUCTURE OF ERR{alpha} LIGAND BINDING DOMAIN IN COMPLEX WITH PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR COACTIVATOR-1{alpha}
J.Biol.Chem., 279, 2004
1XGW
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BU of 1xgw by Molmil
The crystal structure of human enthoprotin N-terminal domain
Descriptor: Epsin 4
Authors:Lunin, V.V, Munger, C, Mazzoni, I, Wagner, J, Cygler, M.
Deposit date:2004-09-17
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of human enthoprotin N-terminal domain
TO BE PUBLISHED
1XBZ
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BU of 1xbz by Molmil
Crystal structure of 3-keto-L-gulonate 6-phosphate decarboxylase E112D/R139V/T169A mutant with bound L-xylulose 5-phosphate
Descriptor: 3-Keto-L-Gulonate 6-Phosphate Decarboxylase, L-XYLULOSE 5-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Akana, J, Gerlt, J.A, Rayment, I.
Deposit date:2004-08-31
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: structural basis for catalytic promiscuity in wild-type and designed mutants of 3-keto-L-gulonate 6-phosphate decarboxylase
Biochemistry, 44, 2005
8J0W
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BU of 8j0w by Molmil
Crystal structure of horse spleen L-ferritin at -40deg Celsius.
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Maity, B, Tian, J, Abe, S, Ueno, T.
Deposit date:2023-04-12
Release date:2023-05-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
8J0Z
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BU of 8j0z by Molmil
Crystal structure of horse spleen L-ferritin at -180deg Celsius cooled from -40deg Celsius.
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Maity, B, Tian, J, Abe, S, Ueno, T.
Deposit date:2023-04-12
Release date:2023-05-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023

224004

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