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PDB: 42254 件

7XON
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Cryo-EM structure of empty ring subunit 1 (ER1) from single empty ring of GroEL-UGT1A complex
分子名称: Chaperonin GroEL
著者Stapleton, K, Takagi, J, Mizohata, E.
登録日2022-05-01
公開日2023-05-03
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM
To Be Published
7XOM
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BU of 7xom by Molmil
Cryo-EM structure of occupied ring subunit 4 (OR4) of GroEL complexed with polyalanine model of UGT1A from GroEL-UGT1A double occupied ring complex
分子名称: Chaperonin GroEL, Polyalanine model of UDP-glucuronosyltransferase 1A (UGT1A)
著者Stapleton, K, Takagi, J, Mizohata, E.
登録日2022-05-01
公開日2023-05-03
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM
To Be Published
7XK0
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BU of 7xk0 by Molmil
Cryo-EM strucrture of Oryza sativa plastid glycyl-tRNA synthetase in complex with tRNA (tRNA locked state)
分子名称: Glycine--tRNA ligase, tRNA(gly)
著者Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J.
登録日2022-04-19
公開日2023-05-03
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.59 Å)
主引用文献Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase.
Nucleic Acids Res., 51, 2023
7XOK
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BU of 7xok by Molmil
Cryo-EM structure of double occupied ring (DOR) of GroEL-UGT1A complex at 2.7 Ang. resolution
分子名称: Chaperonin GroEL
著者Stapleton, K, Takagi, J, Mizohata, E.
登録日2022-05-01
公開日2023-05-03
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM
To Be Published
7XP9
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BU of 7xp9 by Molmil
Phytophthora infesfans RxLR effector AVRvnt1
分子名称: RxLR effector protein Avr-vnt11
著者Xing, W, Hu, Q, Zhou, J, Yao, D.
登録日2022-05-04
公開日2023-06-07
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Chloroplast Protein GLYK Hijacked by Phytophthora Infestans Effector AVRvnt1 in Cytoplasm to Activate NLR
To Be Published
7XPC
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BU of 7xpc by Molmil
Complex structure of D-glycerate-3-kinase(GLYK) and AVRvnt1
分子名称: D-glycerate-3-kinase (GLYK), RxLR effector protein Avr-vnt11
著者Hu, Q, Zhou, J, Yao, D, Xing, W.
登録日2022-05-04
公開日2023-06-07
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Chloroplast Protein GLYK Hijacked by Phytophthora Infestans Effector AVRvnt1 in Cytoplasm to Activate NLR
To Be Published
7X79
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BU of 7x79 by Molmil
The crystal structure of human Calpain-1 protease core in complex with 14b
分子名称: CALCIUM ION, Calpain-1 catalytic subunit, HYDROSULFURIC ACID, ...
著者Zhao, Y, Zhao, J, Shao, M, Yang, H, Rao, Z.
登録日2022-03-09
公開日2023-06-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structure of human Calpain-1 protease core in complex with 14a
To Be Published
7X3P
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BU of 7x3p by Molmil
Crystal structure of human SIRT5 in complex with diazirine inhibitor 9
分子名称: 5-[[(5~{S})-6-[[(1~{S})-1-(4-hydroxyphenyl)-2-oxidanylidene-2-(prop-2-ynylamino)ethyl]amino]-6-oxidanylidene-5-[[4-[3-(trifluoromethyl)-1,2-diazirin-3-yl]phenyl]carbonylamino]hexyl]amino]-5-sulfanylidene-pentanoic acid, DI(HYDROXYETHYL)ETHER, NAD-dependent protein deacylase sirtuin-5, ...
著者Li, G.-B, Deng, J.
登録日2022-03-01
公開日2023-09-06
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Crystal structure of human SIRT5 in complex with diazirine inhibitor 9
To Be Published
7X30
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BU of 7x30 by Molmil
Capsid structure of Staphylococcus jumbo bacteriophage S6
分子名称: Hoc-like protein ORF90, Major structural protein ORF12
著者Koibuchi, W, Uchiyama, J, Matsuzaki, S, Murata, K, Iwasaki, K, Miyazaki, N.
登録日2022-02-27
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Capsid structure of Staphylococcus jumbo bacteriophage S6
To Be Published
7YAS
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BU of 7yas by Molmil
HYDROXYNITRILE LYASE, LOW TEMPERATURE NATIVE STRUCTURE
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, PROTEIN (HYDROXYNITRILE LYASE), ...
著者Zuegg, J, Wagner, U.G, Gugganig, M, Kratky, C.
登録日1999-03-15
公開日1999-10-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Three-dimensional structures of enzyme-substrate complexes of the hydroxynitrile lyase from Hevea brasiliensis.
Protein Sci., 8, 1999
7Y0A
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BU of 7y0a by Molmil
Crystal structure of human short-chain acyl-CoA dehydrogenase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, Short-chain specific acyl-CoA dehydrogenase, ...
著者Huang, Y, Xu, Y, Li, J.
登録日2022-06-04
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.317 Å)
主引用文献Crystal structure of human short-chain acyl-CoA dehydrogenase
To Be Published
7Y0B
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BU of 7y0b by Molmil
Crystal structure of human short-chain acyl-CoA dehydrogenase
分子名称: (2S,3R,4R,5S,6R)-2-[4-chloranyl-3-[[4-[(3S)-oxolan-3-yl]oxyphenyl]methyl]phenyl]-6-(hydroxymethyl)oxane-3,4,5-triol, FLAVIN-ADENINE DINUCLEOTIDE, Short-chain specific acyl-CoA dehydrogenase, ...
著者Huang, Y, Xu, Y, Li, J.
登録日2022-06-04
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.076 Å)
主引用文献Crystal structure of human short-chain acyl-coA dehydrogenase
To Be Published
7Y1H
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BU of 7y1h by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-(5-chloranyl-4-methyl-benzimidazol-1-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-08
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y1W
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Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: (2R,3S)-2-[3-[4,5-bis(chloranyl)benzimidazol-1-yl]propyl]piperidin-3-ol, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-09
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y28
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Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-[6-(3-fluorophenyl)benzimidazol-1-yl]-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-09
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y40
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BU of 7y40 by Molmil
Crystal structure of a bright green fluorescent protein (StayGold) in jellyfish Cytaeis uchidae from Biortus
分子名称: 1,2-ETHANEDIOL, staygold
著者Wu, J, Wang, F, Gui, W, Cheng, W, Yang, Y.
登録日2022-06-13
公開日2023-07-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of a bright green fluorescent protein (StayGold) in jellyfish Cytaeis uchidae from Biortus
To Be Published
7Y3S
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BU of 7y3s by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-(6-bromanyl-7-methyl-imidazo[4,5-b]pyridin-3-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-12
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7XXK
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BU of 7xxk by Molmil
Crystal structure of SARS-CoV-2 N-CTD in complex with GMP
分子名称: CHLORIDE ION, GUANINE, GUANOSINE, ...
著者Zhou, R.J, Ni, X.C, Lei, J.
登録日2022-05-30
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of SARS-CoV-2 N-CTD in complex with GMP
To Be Published
7Y78
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BU of 7y78 by Molmil
Crystal structure of Cry78Aa
分子名称: 1,2-ETHANEDIOL, AMMONIUM ION, Toxin
著者Cao, B.B, Nie, Y.F, Wang, N.C, Guan, Z.Y, Zhang, D.L, Zhang, J.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of Cry78Aa from Bacillus thuringiensis provides insights into its insecticidal activity.
Commun Biol, 5, 2022
7Y79
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Crystal structure of Cry78Aa
分子名称: Toxin
著者Cao, B.B, Nie, Y.F, Wang, N.C, Guan, Z.Y, Zhang, D.L, Zhang, J.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献The crystal structure of Cry78Aa from Bacillus thuringiensis provides insights into its insecticidal activity.
Commun Biol, 5, 2022
7YGG
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BU of 7ygg by Molmil
Crystal structure of human CD47 in complex with engineered SIRPa.D1(N80A)
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Leukocyte surface antigen CD47, ...
著者Yu, J, Tian, W.
登録日2022-07-11
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Crystal Structure of Human CD47 in Complex with Engineered SIRP alpha.D1(N80A).
Molecules, 27, 2022
7XR5
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Crystal structure of imine reductase with NAPDH from Streptomyces albidoflavus
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39,42,45,48,51,54,57-nonadecaoxanonapentacontane-1,59-diol, 6-phosphogluconate dehydrogenase NAD-binding, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zhang, J, Chen, R.C, Gao, S.S.
登録日2022-05-09
公開日2022-10-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Actinomycetes-derived imine reductases with a preference towards bulky amine substrates.
Commun Chem, 5, 2022
7YE7
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BU of 7ye7 by Molmil
Crystal structure of SARS-CoV-2 soluble dimeric ORF9b
分子名称: N-OCTANE, ORF9b protein, nonane
著者Jin, X, Chai, Y, Qi, J, Song, H, Gao, G.F.
登録日2022-07-05
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural characterization of SARS-CoV-2 dimeric ORF9b reveals potential fold-switching trigger mechanism.
Sci China Life Sci, 66, 2023
7YE8
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Crystal structure of SARS-CoV-2 refolded dimeric ORF9b
分子名称: N-OCTANE, ORF9b protein
著者Jin, X, Chai, Y, Qi, J, Song, H, Gao, G.F.
登録日2022-07-05
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structural characterization of SARS-CoV-2 dimeric ORF9b reveals potential fold-switching trigger mechanism.
Sci China Life Sci, 66, 2023
7YIC
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Crystal structure of reductase LSADH
分子名称: Short chain alcohol dehydrogenase
著者Tang, J, Liuqing, C.
登録日2022-07-15
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献crystal structure of reductase LSADH
To Be Published

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件を2024-07-10に公開中

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