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PDB: 42550 件

2CVS
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Structures of Yeast Ribonucleotide Reductase I
分子名称: Ribonucleoside-diphosphate reductase large chain 1
著者Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J, Dealwis, C.
登録日2005-06-14
公開日2006-03-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation
Proc.Natl.Acad.Sci.Usa, 103, 2006
1KZG
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DbsCdc42(Y889F)
分子名称: CDC42 HOMOLOG, GUANINE NUCLEOTIDE EXCHANGE FACTOR DBS
著者Rossman, K.L, Worthylake, D.K, Snyder, J.T, Siderovski, D.P, Campbell, S.L, Sondek, J.
登録日2002-02-06
公開日2002-03-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A crystallographic view of interactions between Dbs and Cdc42: PH domain-assisted guanine nucleotide exchange.
EMBO J., 21, 2002
3AQ5
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Crystal structure of truncated hemoglobin from Tetrahymena pyriformis, Fe(II)-O2 form
分子名称: Group 1 truncated hemoglobin, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
著者Igarashi, J, Kobayashi, K, Matsuoka, A.
登録日2010-10-25
公開日2011-04-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献A hydrogen-bonding network formed by the B10-E7-E11 residues of a truncated hemoglobin from Tetrahymena pyriformis is critical for stability of bound oxygen and nitric oxide detoxification.
J.Biol.Inorg.Chem., 16, 2011
3AR6
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Calcium pump crystal structure with bound TNP-ADP and TG in the absence of calcium
分子名称: 2',3'-O-[(1R,6R)-2,4,6-trinitrocyclohexa-2,4-diene-1,1-diyl]adenosine 5'-(trihydrogen diphosphate), MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
著者Toyoshima, C, Yonekura, S, Tsueda, J, Iwasawa, S.
登録日2010-11-24
公開日2011-02-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+.
Proc.Natl.Acad.Sci.USA, 108, 2011
1L4W
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NMR structure of an AChR-peptide (Torpedo Californica, alpha-subunit residues 182-202) in complex with alpha-Bungarotoxin
分子名称: Acetylcholine receptor protein, alpha-Bungarotoxin
著者Samson, A.O, Scherf, T, Rodriguez, E, Eisenstein, M, Anglister, J.
登録日2002-03-06
公開日2002-07-17
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献The mechanism for acetylcholine receptor inhibition by alpha-neurotoxins and species-specific resistance to alpha-bungarotoxin revealed by NMR.
Neuron, 35, 2002
1OX3
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crystal structure of mini-fibritin
分子名称: Fibritin
著者Boudko, S.P, Stetefeld, J.
登録日2003-04-01
公開日2004-04-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Design and Crystal Structure of Bacteriophage T4 Mini-Fibritin NCCF.
J.Mol.Biol., 339, 2004
2CEU
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Despentapeptide insulin in acetic acid (pH 2)
分子名称: INSULIN, SULFATE ION
著者Whittingham, J.L, Zhang, Y, Zakova, L, Dodson, E.J, Turkenburg, J.P, Brange, J, Dodson, G.G.
登録日2006-02-10
公開日2006-03-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献I222 Crystal Form of Despentapeptide (B26-B30) Insulin Provides New Insights Into the Properties of Monomeric Insulin.
Acta Crystallogr.,Sect.D, 62, 2006
2CCM
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X-ray structure of Calexcitin from Loligo pealeii at 1.8A
分子名称: CALCIUM ION, CALEXCITIN
著者Erskine, P.T, Beaven, G.D.E, Wood, S.P, Fox, G, Vernon, J, Giese, K.P, Cooper, J.B.
登録日2006-01-16
公開日2006-01-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the Neuronal Protein Calexcitin Suggests a Mode of Interaction in Signalling Pathways of Learning and Memory.
J.Mol.Biol., 357, 2006
1LD6
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STRUCTURE OF BPTI_8A MUTANT
分子名称: PANCREATIC TRYPSIN INHIBITOR
著者Cierpicki, T, Otlewski, J.
登録日2002-04-08
公開日2002-09-11
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献NMR structures of two variants of bovine pancreatic trypsin inhibitor (BPTI) reveal unexpected influence of mutations on protein structure and stability.
J.Mol.Biol., 321, 2002
2CAZ
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ESCRT-I core
分子名称: PROTEIN SRN2, SUPPRESSOR PROTEIN STP22 OF TEMPERATURE-SENSITIVE ALPHA-FACTOR RECEPTOR AND ARGININE PERMEASE, VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS28
著者Gill, D.J, Teo, H, Sun, J, Perisic, O, Veprintsev, D.B, Vallis, Y, Emr, S.D, Williams, R.L.
登録日2005-12-23
公開日2006-04-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Escrt-I Core and Escrt-II Glue Domain Structures Reveal Role for Glue in Linking to Escrt-I and Membranes.
Cell(Cambridge,Mass.), 125, 2006
1P9C
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NMR solution structure of the C-terminal ubiquitin-interacting motif of the proteasome subunit S5a
分子名称: 26S proteasome non-ATPase regulatory subunit 4
著者Mueller, T.D, Feigon, J.
登録日2003-05-10
公開日2003-10-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural determinants for the binding of ubiquitin-like domains to the proteasome.
Embo J., 22, 2003
2CNJ
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NMR studies on the interaction of Insulin-Growth Factor II (IGF-II) with IGF2R domain 11
分子名称: CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR
著者Williams, C, Prince, S, Zaccheo, O, Hassan, A.B, Crosby, J, Crump, M.
登録日2006-05-22
公開日2007-05-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Insights Into the Interaction of Insulin-Like Growth Factor 2 with Igf2R Domain 11.
Structure, 15, 2007
2JKV
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Structure of human Phosphogluconate Dehydrogenase in complex with NADPH at 2.53A
分子名称: 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING, CHLORIDE ION, ...
著者Pilka, E.S, Kavanagh, K.L, von Delft, F, Muniz, J.R.C, Murray, J, Picaud, S, Guo, K, Edwards, A, Arrowsmith, C.H, Weigelt, J, Bountra, C, Oppermann, U.
登録日2008-09-01
公開日2009-09-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.532 Å)
主引用文献Structure of Human Phosphogluconate Dehydrogenase in Complex with Nadph at 2.53A
To be Published
2D49
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Solution structure of the Chitin-Binding Domain of Streptomyces griseus Chitinase C
分子名称: chitinase C
著者Akagi, K, Watanabe, J, Hara, M, Kezuka, Y, Chikaishi, E, Yamaguchi, T, Akutsu, H, Nonaka, T, Watanabe, T, Ikegami, T.
登録日2005-10-11
公開日2006-10-11
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Identification of the substrate interaction region of the chitin-binding domain of Streptomyces griseus chitinase C
J.Biochem.(Tokyo), 139, 2006
2D1Q
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Crystal structure of the thermostable Japanese Firefly Luciferase complexed with MgATP
分子名称: ADENOSINE MONOPHOSPHATE, Luciferin 4-monooxygenase
著者Nakatsu, T, Ichiyama, S, Hiratake, J, Saldanha, A, Kobashi, N, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-08-31
公開日2006-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for the spectral difference in luciferase bioluminescence.
Nature, 440, 2006
2D6B
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Novel Bromate Species trapped within a Protein Crystal
分子名称: BROMIC ACID, CHLORIDE ION, SODIUM ION, ...
著者Ondracek, J, Mesters, J.R.
登録日2005-11-10
公開日2005-11-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献An ensemble of crystallographic models enables the description of novel bromate-oxoanion species trapped within a protein crystal
Acta Crystallogr.,Sect.D, 62, 2006
1Q2B
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CELLOBIOHYDROLASE CEL7A WITH DISULPHIDE BRIDGE ADDED ACROSS EXO-LOOP BY MUTATIONS D241C AND D249C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COBALT (II) ION, EXOCELLOBIOHYDROLASE I
著者Stahlberg, J, Harris, M, Jones, T.A.
登録日2003-07-24
公開日2003-11-25
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Engineering the exo-loop of Trichoderma reesei cellobiohydrolase, Cel7A. A comparison with Phanerochaete chrysosporium Cel7D.
J.Mol.Biol., 333, 2003
5V2X
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Ethylene forming enzyme in complex with manganese and 2-oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, MANGANESE (II) ION
著者Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
登録日2017-03-06
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.847 Å)
主引用文献Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
2D1R
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Crystal structure of the thermostable Japanese firefly Luciferase complexed with OXYLUCIFERIN and AMP
分子名称: 2-(6-HYDROXY-1,3-BENZOTHIAZOL-2-YL)-1,3-THIAZOL-4(5H)-ONE, ADENOSINE MONOPHOSPHATE, Luciferin 4-monooxygenase
著者Nakatsu, T, Ichiyama, S, Hiratake, J, Saldanha, A, Kobashi, N, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-08-31
公開日2006-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for the spectral difference in luciferase bioluminescence.
Nature, 440, 2006
2D26
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Active site distortion is sufficient for proteinase inhibit second crystal structure of covalent serpin-proteinase complex
分子名称: Alpha-1-antitrypsin, Elastase-1
著者Dementiev, A, Dobo, J, Gettins, P.G.
登録日2005-09-03
公開日2005-11-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Active Site Distortion Is Sufficient for Proteinase Inhibition by Serpins: Structure of the covalent complex of alpha 1-proteinase inhibitor with porcine pancreatic elastase
J.Biol.Chem., 281, 2006
2D41
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X-ray crystal structure of hepatitis C virus RNA-dependent RNA polymerase in complex with non-nucleoside inhibitor
分子名称: 5'-ACETYL-4-{[(2,4-DIMETHYLPHENYL)SULFONYL]AMINO}-2,2'-BITHIOPHENE-5-CARBOXYLIC ACID, polyprotein
著者Biswal, B.K, Wang, M, Cherney, M.M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Bedard, J, James, M.N.G.
登録日2005-10-05
公開日2006-08-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Non-nucleoside Inhibitors Binding to Hepatitis C Virus NS5B Polymerase Reveal a Novel Mechanism of Inhibition
J.Mol.Biol., 361, 2006
1Q5W
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Ubiquitin Recognition by Npl4 Zinc-Fingers
分子名称: Ubiquitin, ZINC ION, homolog of yeast nuclear protein localization 4
著者Alam, S.L, Sun, J, Payne, M, Welch, B.D, Blake, B.K, Davis, D.R, Meyer, H.H, Emr, S.D, Sundquist, W.I.
登録日2003-08-11
公開日2004-03-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Ubiquitin interactions of NZF zinc fingers.
Embo J., 23, 2004
5UK1
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CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
著者Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
登録日2017-01-19
公開日2017-05-31
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
3B5A
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Crystal Structure of a Minimally Hinged Hairpin Ribozyme Incorporating A38G mutation with a 2'OMe modification at the active site
分子名称: 29-mer Loop A and Loop B Ribozyme strand, COBALT HEXAMMINE(III), Loop A Substrate strand, ...
著者MacElrevey, C, Krucinska, J, Wedekind, J.E.
登録日2007-10-25
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural effects of nucleobase variations at key active site residue Ade38 in the hairpin ribozyme.
Rna, 14, 2008
3B7O
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Crystal structure of the human tyrosine phosphatase SHP2 (PTPN11) with an accessible active site
分子名称: D-MALATE, Tyrosine-protein phosphatase non-receptor type 11
著者Ugochukwu, E, Barr, A, Patel, A, King, O, Niesen, F, Salah, E, Savitsky, P, Pilka, E.S, Elkins, J, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, von Delft, F, Knapp, S, Structural Genomics Consortium (SGC)
登録日2007-10-31
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Large-scale structural analysis of the classical human protein tyrosine phosphatome.
Cell(Cambridge,Mass.), 136, 2009

224004

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