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PDB: 42507 件
8AGY
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The Corramycin phosphotransferase in complex with Corramycin
分子名称: ABCD, Corramycin phosphotransferase, GLYCEROL
著者Adam, S, Mueller, R, Koehnke, J.
登録日2022-07-20
公開日2023-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Corramycin phosphotransferase in complex with Corramycin
To Be Published
5D5Z
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BU of 5d5z by Molmil
Structure of Chaetomium thermophilum Skn7 coiled-coil domain, crystal form II
分子名称: Putative transcription factor
著者Neudegger, T, Verghese, J, Hayer-Hartl, M, Bracher, A, Hartl, F.U.
登録日2015-08-11
公開日2015-12-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of human heat-shock transcription factor 1 in complex with DNA.
Nat.Struct.Mol.Biol., 23, 2016
1GPI
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BU of 1gpi by Molmil
Cellobiohydrolase Cel7D (CBH 58) from Phanerochaete chrysosporium. Catalytic module at 1.32 Angstrom resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, EXOGLUCANASE I
著者Munoz, I.G, Mowbray, S.L, Stahlberg, J.
登録日2001-11-05
公開日2002-01-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Family 7 Cellobiohydrolases from Phanerochaete Chrysosporium: Crystal Structure of the Catalytic Module of Cel7D (Cbh58) at 1.32 Angstrom Resolution and Homology Models of the Isozymes.
J.Mol.Biol., 314, 2001
3B5F
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BU of 3b5f by Molmil
Crystal Structure of a Minimally Hinged Hairpin Ribozyme Incorporating the Ade38Dap Mutation and a 2',5' Phosphodiester Linkage at the Active Site
分子名称: 29-mer Loop A and Loop B Ribozyme strand, COBALT HEXAMMINE(III), Loop A Substrate strand, ...
著者MacElrevey, C, Krucinska, J, Wedekind, J.E.
登録日2007-10-25
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural effects of nucleobase variations at key active site residue Ade38 in the hairpin ribozyme.
Rna, 14, 2008
8JTS
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BU of 8jts by Molmil
hOCT1 in complex with metformin in outward open conformation
分子名称: Metformin, Solute carrier family 22 member 1
著者Zhang, S, Zhu, A, Kong, F, Chen, J, Lan, B, He, G, Gao, K, Cheng, L, Yan, C, Chen, L, Liu, X.
登録日2023-06-22
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (4.14 Å)
主引用文献Structural insights into human organic cation transporter 1 transport and inhibition.
Cell Discov, 10, 2024
5IHW
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BU of 5ihw by Molmil
The crystal structure of SdrE from staphylococcus aureus
分子名称: Serine-aspartate repeat-containing protein E
著者Zhang, S, Wei, J, Wu, S, Zhang, X, Luo, M, Wang, D.
登録日2016-02-29
公開日2017-03-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The crystal structure of SdrE from staphylococcus aureus
To Be Published
8JU0
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BU of 8ju0 by Molmil
hOCT1 in complex with spironolactone in inward facing occluded conformation
分子名称: SPIRONOLACTONE, Solute carrier family 22 member 1
著者Zhang, S, Zhu, A, Kong, F, Chen, J, Lan, B, He, G, Gao, K, Cheng, L, Yan, C, Chen, L, Liu, X.
登録日2023-06-23
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Structural insights into human organic cation transporter 1 transport and inhibition.
Cell Discov, 10, 2024
8JTW
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hOCT1 in complex with nb5660 in inward facing partially open 1 conformation
分子名称: Solute carrier family 22 member 1, nanobody 56
著者Zhang, S, Zhu, A, Kong, F, Chen, J, Lan, B, He, G, Gao, K, Cheng, L, Yan, C, Chen, L, Liu, X.
登録日2023-06-22
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Structural insights into human organic cation transporter 1 transport and inhibition.
Cell Discov, 10, 2024
7L8I
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BU of 7l8i by Molmil
SARS-CoV-2 Main Protease (Mpro) in Complex with Rupintrivir (P21)
分子名称: 3C-like proteinase, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
著者Lockbaum, G.J, Henes, M, Lee, J.M, Timm, J, Nalivaika, E.A, Yilmaz, N.K, Thompson, P.R, Schiffer, C.A.
登録日2020-12-31
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Pan-3C Protease Inhibitor Rupintrivir Binds SARS-CoV-2 Main Protease in a Unique Binding Mode.
Biochemistry, 60, 2021
3HSG
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Crystal structure of E. coli HPPK(Y53A) in complex with MgAMPCPP
分子名称: ACETATE ION, CHLORIDE ION, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ...
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-06-10
公開日2010-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK
To be Published
8OGR
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BU of 8ogr by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
分子名称: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-[3-(diethylamino)phenyl]ethanamide
著者Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
To Be Published
8OGV
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BU of 8ogv by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C08
分子名称: (3S)-3-hydroxy-2-methyl-2,3-dihydro-1H-isoindol-1-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
著者Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C08
To Be Published
8JTX
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BU of 8jtx by Molmil
hOCT1 in complex with nb5660 in inward facing fully open conformation
分子名称: Solute carrier family 22 member 1, nanobody 56
著者Zhang, S, Zhu, A, Kong, F, Chen, J, Lan, B, He, G, Gao, K, Cheng, L, Yan, C, Chen, L, Liu, X.
登録日2023-06-22
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Structural insights into human organic cation transporter 1 transport and inhibition.
Cell Discov, 10, 2024
8OGZ
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BU of 8ogz by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D06
分子名称: (3-methoxyphenyl)-pyrrol-1-yl-methanone, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
著者Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D06
To Be Published
8JTZ
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BU of 8jtz by Molmil
hOCT1 in complex with spironolactone in outward facing partially occluded conformation
分子名称: SPIRONOLACTONE, Solute carrier family 22 member 1
著者Zhang, S, Zhu, A, Kong, F, Chen, J, Lan, B, He, G, Gao, K, Cheng, L, Yan, C, Chen, L, Liu, X.
登録日2023-06-22
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Structural insights into human organic cation transporter 1 transport and inhibition.
Cell Discov, 10, 2024
8OHJ
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BU of 8ohj by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry G08
分子名称: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-ethyl-2-{[5-(propan-2-yl)-1,3,4-oxadiazol-2-yl]sulfanyl}acetamide
著者Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
登録日2023-03-21
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry G08
To Be Published
3BNO
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BU of 3bno by Molmil
Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (Br-derivative)
分子名称: A site of human mitochondrial ribosome
著者Kondo, J, Westhof, E.
登録日2007-12-14
公開日2008-06-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates
Nucleic Acids Res., 36, 2008
7L8J
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BU of 7l8j by Molmil
SARS-CoV-2 Main Protease (Mpro) in Complex with Rupintrivir (P21212)
分子名称: 3C-like proteinase, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
著者Lockbaum, G.J, Henes, M, Lee, J.M, Timm, J, Nalivaika, E.A, Yilmaz, N.K, Thompson, P.R, Schiffer, C.A.
登録日2020-12-31
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Pan-3C Protease Inhibitor Rupintrivir Binds SARS-CoV-2 Main Protease in a Unique Binding Mode.
Biochemistry, 60, 2021
7L8H
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BU of 7l8h by Molmil
EV68 3C protease (3Cpro) in Complex with Rupintrivir
分子名称: 3C Protease, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
著者Lockbaum, G.J, Henes, M, Lee, J.M, Timm, J, Nalivaika, E.A, Yilmaz, N.K, Thompson, P.R, Schiffer, C.A.
登録日2020-12-31
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Pan-3C Protease Inhibitor Rupintrivir Binds SARS-CoV-2 Main Protease in a Unique Binding Mode.
Biochemistry, 60, 2021
8KH2
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BU of 8kh2 by Molmil
Crystal structure of horse-spleen L-ferritin fused with amyloid beta peptide (1-42).
分子名称: CADMIUM ION, CHLORIDE ION, Ferritin light chain,Amyloid-beta precursor protein (Fragment), ...
著者Maity, B, Tian, J, Abe, S, Ueno, T.
登録日2023-08-21
公開日2024-04-03
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Fusion of amyloid beta with ferritin yields an isolated oligomeric beta-sheet-rich aggregate inside the ferritin cage.
Biomater Sci, 12, 2024
3BU5
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BU of 3bu5 by Molmil
Crystal structure of the insulin receptor kinase in complex with IRS2 KRLB peptide and ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Insulin receptor substrate 2, MAGNESIUM ION, ...
著者Wu, J, Hubbard, S.R.
登録日2007-12-31
公開日2008-02-19
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and biochemical characterization of the KRLB region in insulin receptor substrate-2.
Nat.Struct.Mol.Biol., 15, 2008
8JTT
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BU of 8jtt by Molmil
hOCT1 in complex with metformin in outward occluded conformation
分子名称: Metformin, Solute carrier family 22 member 1
著者Zhang, S, Zhu, A, Kong, F, Chen, J, Lan, B, He, G, Gao, K, Cheng, L, Yan, C, Chen, L, Liu, X.
登録日2023-06-22
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献Structural insights into human organic cation transporter 1 transport and inhibition.
Cell Discov, 10, 2024
1KAS
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BU of 1kas by Molmil
BETA-KETOACYL-ACP SYNTHASE II FROM ESCHERICHIA COLI
分子名称: BETA-KETOACYL ACP SYNTHASE II
著者Huang, W, Jia, J, Edwards, P, Dehesh, K, Schneider, G, Lindqvist, Y.
登録日1997-12-22
公開日1999-03-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of beta-ketoacyl-acyl carrier protein synthase II from E.coli reveals the molecular architecture of condensing enzymes.
EMBO J., 17, 1998
5DF8
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BU of 5df8 by Molmil
CRYSTAL STRUCTURE OF PENICILLIN-BINDING PROTEIN 3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH CEFOPERAZONE
分子名称: (2R,4R,5R)-2-[(1R)-1-{[(2R)-2-{[(4-ethyl-2,3-dioxopiperazin-1-yl)carbonyl]amino}-2-(4-hydroxyphenyl)acetyl]amino}-2-oxoethyl]-5-methyl-1,3-thiazinane-4-carboxylic acid, CHLORIDE ION, Cell division protein, ...
著者Ren, J, Nettleship, J.E, Males, A, Stuart, D.I, Owens, R.J.
登録日2015-08-26
公開日2016-01-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of penicillin-binding protein 3 in complexes with azlocillin and cefoperazone in both acylated and deacylated forms.
Febs Lett., 590, 2016
1HAY
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BU of 1hay by Molmil
Snapshots of serine protease catalysis: (B) acyl-enzyme intermediate between porcine pancreatic elastase and human beta-casomorphin-7 jumped to pH 10 for 10 seconds
分子名称: CALCIUM ION, ELASTASE 1, SULFATE ION
著者Wilmouth, R.C, Edman, K, Neutze, R, Wright, P.A, Clifton, I.J, Schneider, T.R, Schofield, C.J, Hajdu, J.
登録日2001-04-10
公開日2001-08-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献X-Ray Snapshots of Serine Protease Catalysis Reveal a Tetrahedral Intermediate
Nat.Struct.Biol., 8, 2001

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