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PDB: 412 件

2YY9
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Crystal structure of BTB domain from mouse HKR3
分子名称: Zinc finger and BTB domain-containing protein 48
著者Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2008-04-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of BTB domain from mouse HKR3
To be Published
2YY1
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Crystal structure of N-terminal domain of human galectin-9 containing L-acetyllactosamine
分子名称: Galectin-9, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2008-04-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Crystal structure of N-terminal domain of human galectin-9 containing L-acetyllactosamine
To be Published
6YEV
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Crystal structure of MsrA C206 and Trx C35S complex from Escherichia coli
分子名称: Peptide methionine sulfoxide reductase MsrA, SODIUM ION, Thioredoxin 1
著者Napolitano, S, Zyla, D, Glockshuber, R.
登録日2020-03-25
公開日2021-04-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Structure of a complex between the single-cysteine mutant MsrA C206 and Trx C35S from Escherichia coli
To Be Published
7VNW
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Crystal Structure of tRNAVal from Sulfolobus Tokodaii(Dephosphorylated)
分子名称: RNA (78-MER)
著者Yamashita, S, Ohira, T, Suzuki, T, Tomtia, K.
登録日2021-10-12
公開日2022-05-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Reversible RNA phosphorylation stabilizes tRNA for cellular thermotolerance.
Nature, 605, 2022
2LDS
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BU of 2lds by Molmil
Solution Structure of a Short-chain LaIT1 from the Venom of Scorpion Liocheles australasiae
分子名称: Insecticidal toxin LaIT1
著者Horita, S, Miyakawa, T, Nagata, K, Tanokura, M.
登録日2011-06-01
公開日2011-09-14
最終更新日2024-10-30
実験手法SOLUTION NMR
主引用文献Solution structure of a short-chain insecticidal toxin LaIT1 from the venom of scorpion Liocheles australasiae.
Biochem.Biophys.Res.Commun., 411, 2011
2GML
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Crystal Structure of Catalytic Domain of E.coli RluF
分子名称: Ribosomal large subunit pseudouridine synthase F
著者Sunita, S, Zhenxing, H, Swaathi, J, Cygler, M, Matte, A, Sivaraman, J.
登録日2006-04-06
公開日2006-07-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Domain Organization and Crystal Structure of the Catalytic Domain of E.coli RluF, a Pseudouridine Synthase that Acts on 23S rRNA
J.Mol.Biol., 359, 2006
4EN8
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BU of 4en8 by Molmil
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-6-sialyllactose
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
登録日2012-04-12
公開日2012-06-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
4EN9
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Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-6-sialyllactosamine
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
登録日2012-04-12
公開日2012-06-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
3VM8
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Crystal structure of the human APOBEC3C having HIV-1 Vif-binding interface
分子名称: Probable DNA dC->dU-editing enzyme APOBEC-3C, ZINC ION
著者Kitamura, S, Suzuki, A, Watanabe, N, Iwatani, Y.
登録日2011-12-09
公開日2012-10-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of the human APOBEC3C having HIV-1 Vif-binding interface
To be Published
4EN7
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BU of 4en7 by Molmil
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-3-sialyllactosamine
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
登録日2012-04-12
公開日2012-06-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
4EN6
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BU of 4en6 by Molmil
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-3-sialyllactose
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
登録日2012-04-12
公開日2012-06-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
7VNV
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BU of 7vnv by Molmil
Crystal Structure of tRNAVal from Sulfolobus Tokodaii
分子名称: RNA (78-MER)
著者Yamashita, S, Ohira, T, Suzuki, T, Tomtia, K.
登録日2021-10-12
公開日2022-05-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Reversible RNA phosphorylation stabilizes tRNA for cellular thermotolerance.
Nature, 605, 2022
2D3W
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Crystal Structure of Escherichia coli SufC, an ATPase compenent of the SUF iron-sulfur cluster assembly machinery
分子名称: Probable ATP-dependent transporter sufC
著者Kitaoka, S, Wada, K, Hasegawa, Y, Minami, Y, Takahashi, Y, Fukuyama, K.
登録日2005-10-03
公開日2006-01-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Escherichia coli SufC, an ABC-type ATPase component of the SUF iron-sulfur cluster assembly machinery
Febs Lett., 580, 2006
2KSW
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BU of 2ksw by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for Oryctin
分子名称: Oryctin
著者Horita, S, Ishibashi, J, Nagata, K, Miyakawa, T, Yamakawa, M, Tanokura, M.
登録日2010-01-14
公開日2010-07-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Isolation, cDNA cloning, and structure-based functional characterization of oryctin, a hemolymph protein from the coconut rhinoceros beetle, Oryctes rhinoceros, as a novel serine protease inhibitor
J.Biol.Chem., 285, 2010
6SYM
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BU of 6sym by Molmil
Crystal structure of Escherichia coli MsrB (reduced form)
分子名称: Peptide methionine sulfoxide reductase MsrB, ZINC ION
著者Napolitano, S, Zyla, D, Glockshuber, R.
登録日2019-09-30
公開日2020-10-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.6302 Å)
主引用文献Structure of Peptide methionine sulfoxide reductase MsrB at 1.63 Angstrom resolution
To Be Published
1V8D
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BU of 1v8d by Molmil
Crystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilus
分子名称: ZINC ION, hypothetical protein (TT1679)
著者Kishishita, S, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-01-05
公開日2004-07-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Crystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilus HB8
To be Published
2G81
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Crystal Structure of the Bowman-Birk Inhibitor from Vigna unguiculata Seeds in Complex with Beta-trypsin at 1.55 Angstrons Resolution
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, Bowman-Birk type seed trypsin and chymotrypsin inhibitor, ...
著者Freitas, S.M, Barbosa, J.A.R.G, Paulino, L.S, Teles, R.C.L, Esteves, G.F, Ventura, M.M.
登録日2006-03-01
公開日2007-01-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of the Bowman-Birk Inhibitor from Vigna unguiculata Seeds in Complex with {beta}-Trypsin at 1.55 A Resolution and Its Structural Properties in Association with Proteinases
Biophys.J., 92, 2007
2EKK
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BU of 2ekk by Molmil
Solution structure of RUH-074, a human UBA domain
分子名称: UBA domain from E3 ubiquitin-protein ligase HUWE1
著者Kitasaka, S, Ruhul Momen, A.Z.M, Hirota, H, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-23
公開日2007-09-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of RUH-074, a human UBA domain
to be published
2JH2
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X-ray crystal structure of a cohesin-like module from Clostridium perfringens
分子名称: O-GLCNACASE NAGJ
著者Chitayat, S, Gregg, K, Adams, J.J, Ficko-Blean, E, Bayer, E.A, Boraston, A.B, Smith, S.P.
登録日2007-02-19
公開日2007-11-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Three-Dimensional Structure of a Putative Non- Cellulosomal Cohesin Module from a Clostridium Perfringens Family 84 Glycoside Hydrolase.
J.Mol.Biol., 375, 2008
2CXD
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BU of 2cxd by Molmil
Crystal structure of conserved hypothetical protein, TTHA0068 from Thermus thermophilus HB8
分子名称: conserved hypothetical protein, TTHA0068
著者Kishishita, S, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of conserved hypothetical protein, TTHA0068 from Thermus thermophilus HB8
To be Published
2CWY
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BU of 2cwy by Molmil
Crystal structure of conserved hypothetical protein, TTHA0068 from Thermus thermophilus HB8
分子名称: hypothetical protein TTHA0068
著者Kishishita, S, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-27
公開日2005-12-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of conserved hypothetical protein, TTHA0068 from Thermus thermophilus HB8
To be Published
1SWT
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BU of 1swt by Molmil
CORE-STREPTAVIDIN MUTANT D128A IN COMPLEX WITH BIOTIN AT PH 4.5
分子名称: BIOTIN, PROTEIN (STREPTAVIDIN)
著者Freitag, S, Le Trong, I, Chu, V, Klumb, L.A, Stayton, P.S, Stenkamp, R.E.
登録日1998-10-22
公開日1999-07-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A structural snapshot of an intermediate on the streptavidin-biotin dissociation pathway.
Proc.Natl.Acad.Sci.USA, 96, 1999
1IU7
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HOLO FORM OF COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS
分子名称: AMINE OXIDASE, COPPER (II) ION
著者Kishishita, S, Okajima, T, Kim, M, Yamaguchi, H, Hirota, S, Suzuki, S, Kuroda, S, Tanizawa, K, Mure, M.
登録日2002-02-28
公開日2003-02-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Role of Copper Ion in Bacterial Copper Amine Oxidase: Spectroscopic and Crystallographic Studies of Metal-Substituted Enzymes
J.AM.CHEM.SOC., 125, 2003
1SWD
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APO-CORE-STREPTAVIDIN IN COMPLEX WITH BIOTIN (TWO UNOCCUPIED BINDING SITES) AT PH 4.5
分子名称: BIOTIN, STREPTAVIDIN
著者Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E.
登録日1997-03-04
公開日1998-03-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural studies of the streptavidin binding loop.
Protein Sci., 6, 1997
1SWE
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BU of 1swe by Molmil
APO-CORE-STREPTAVIDIN IN COMPLEX WITH BIOTIN AT PH 4.5
分子名称: BIOTIN, STREPTAVIDIN
著者Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E.
登録日1997-03-04
公開日1998-03-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structural studies of the streptavidin binding loop.
Protein Sci., 6, 1997

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